RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W MON2P48563 1636 aaPredicted RBP0.4□□□□□ -2.35
RRP6YOR001W YLL006W-AQ3E814 58 aa0.38□□□□□ -2.35
RRP6YOR001W RPS29AP41057 56 aaKnown RBP0.38□□□□□ -2.35
RRP6YOR001W COA2Q3E823 68 aa0.37□□□□□ -2.35
RRP6YOR001W YGL258W-AQ3E740 77 aa0.37□□□□□ -2.35
RRP6YOR001W NUP188P52593 1655 aaKnown RBP0.37□□□□□ -2.35
RRP6YOR001W USO1P25386 1790 aa0.36□□□□□ -2.35
RRP6YOR001W SSK2P53599 1579 aa0.36□□□□□ -2.35
RRP6YOR001W YPR010C-AA5Z2X5 72 aa0.36□□□□□ -2.35
RRP6YOR001W YDR524C-BQ3E6R4 66 aa0.33□□□□□ -2.36
RRP6YOR001W CUP1-1P0CX80 61 aa0.33□□□□□ -2.36
RRP6YOR001W CUP1-2P0CX81 61 aa0.33□□□□□ -2.36
RRP6YOR001W ULS1Q08562 1619 aa0.32□□□□□ -2.36
RRP6YOR001W YOR072W-BQ3E832 53 aa0.32□□□□□ -2.36
RRP6YOR001W NUP192P47054 1683 aa0.31□□□□□ -2.36
RRP6YOR001W BUD3P25558 1636 aa0.27□□□□□ -2.37
RRP6YOR001W PEP1P32319 1579 aa0.27□□□□□ -2.37
RRP6YOR001W FMP27Q06179 2628 aa0.26□□□□□ -2.37
RRP6YOR001W STU1P38198 1513 aa0.25□□□□□ -2.37
RRP6YOR001W RKR1Q04781 1562 aa0.25□□□□□ -2.37
RRP6YOR001W HIR3P47171 1648 aa0.23□□□□□ -2.37
RRP6YOR001W GCN2P15442 1659 aa0.21□□□□□ -2.38
RRP6YOR001W NUP170P38181 1502 aa0.19□□□□□ -2.38
RRP6YOR001W GCN1P33892 2672 aaKnown RBP0.19□□□□□ -2.38
RRP6YOR001W YHR050W-AQ05451 56 aa0.18□□□□□ -2.38
RRP6YOR001W YOR316C-AQ3E806 69 aa0.18□□□□□ -2.38
RRP6YOR001W THO2P53552 1597 aaKnown RBP0.18□□□□□ -2.38
RRP6YOR001W ATG2P53855 1592 aa0.18□□□□□ -2.38
RRP6YOR001W TOR2P32600 2474 aaKnown RBP0.16□□□□□ -2.38
RRP6YOR001W MEC1P38111 2368 aa0.16□□□□□ -2.38
RRP6YOR001W FIG2P25653 1609 aa0.15□□□□□ -2.39
RRP6YOR001W YJL133C-AQ3E7A3 74 aa0.14□□□□□ -2.39
RRP6YOR001W COX9P07255 59 aa0.14□□□□□ -2.39
RRP6YOR001W YLR342W-AQ3E810 57 aa0.13□□□□□ -2.39
RRP6YOR001W YDR034C-AP0C289 58 aa0.12□□□□□ -2.39
RRP6YOR001W DDR2P89113 61 aa0.11□□□□□ -2.39
RRP6YOR001W FLO1P32768 1537 aa0.11□□□□□ -2.39
RRP6YOR001W RPL29P05747 59 aaPredicted RBP0.07□□□□□ -2.4
RRP6YOR001W TEL1P38110 2787 aa0.04□□□□□ -2.4
RRP6YOR001W Q0017Q9ZZX8 53 aa0.02□□□□□ -2.41
RRP6YOR001W SMX2P40204 77 aaKnown RBP0.01□□□□□ -2.41
RRP6YOR001W YML054C-AQ3E809 52 aa0□□□□□ -2.41
RRP6YOR001W YJL127C-BQ3E828 52 aa-0.01□□□□□ -2.41
RRP6YOR001W YHR073W-AP0C5N7 58 aa-0.03□□□□□ -2.41
RRP6YOR001W CSF1Q12150 2958 aa-0.04□□□□□ -2.42
RRP6YOR001W DYN1P36022 4092 aa-0.04□□□□□ -2.42
RRP6YOR001W MLP2P40457 1679 aa-0.05□□□□□ -2.42
RRP6YOR001W CHC1P22137 1653 aaKnown RBP-0.08□□□□□ -2.42
RRP6YOR001W IRA2P19158 3079 aa-0.12□□□□□ -2.43
RRP6YOR001W TRA1P38811 3744 aa-0.13□□□□□ -2.43
RRP6YOR001W TOM7P53507 60 aa-0.14□□□□□ -2.43
RRP6YOR001W IRA1P18963 3092 aa-0.15□□□□□ -2.43
RRP6YOR001W PMP3P87284 55 aa-0.15□□□□□ -2.43
RRP6YOR001W YMR105W-AQ8TGS8 64 aa-0.16□□□□□ -2.44
RRP6YOR001W VPS13Q07878 3144 aa-0.18□□□□□ -2.44
RRP6YOR001W HOR7Q05827 59 aa-0.19□□□□□ -2.44
RRP6YOR001W YLL066W-BQ8TGJ7 56 aa-0.22□□□□□ -2.44
RRP6YOR001W TOM1Q03280 3268 aa-0.24□□□□□ -2.45
RRP6YOR001W NCE101Q02820 53 aa-0.24□□□□□ -2.45
RRP6YOR001W RPL39P04650 51 aa-0.29□□□□□ -2.46
RRP6YOR001W Q0297Q9ZZV8 51 aa-0.37□□□□□ -2.47
RRP6YOR001W YIL046W-AQ3E7Z4 54 aa-0.37□□□□□ -2.47
RRP6YOR001W YDR034W-BQ6Q5X2 51 aa-0.43□□□□□ -2.48
Retrieved 63 of 5,963 RNA–protein pairs in 110 ms