RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C YOL164W-AQ3E7A5 60 aa1.46□□□□□ -2.18
SSN8YNL025C YLR307C-AQ3E825 87 aa1.46□□□□□ -2.18
SSN8YNL025C YLR157W-EP0CF00 54 aa1.45□□□□□ -2.18
SSN8YNL025C RPS27BP38711 82 aa1.45□□□□□ -2.18
SSN8YNL025C RPL37AP49166 88 aaKnown RBP1.44□□□□□ -2.18
SSN8YNL025C YFR009W-AP0C5M9 85 aa1.42□□□□□ -2.18
SSN8YNL025C SIP18P50263 79 aa1.42□□□□□ -2.18
SSN8YNL025C BEM2P39960 2167 aaKnown RBP1.42□□□□□ -2.18
SSN8YNL025C HFA1P32874 2273 aa1.41□□□□□ -2.18
SSN8YNL025C RPL29P05747 59 aaPredicted RBP1.41□□□□□ -2.18
SSN8YNL025C BLM10P43583 2143 aa1.41□□□□□ -2.18
SSN8YNL025C YBR016WP38216 128 aa1.4□□□□□ -2.19
SSN8YNL025C YIL046W-AQ3E7Z4 54 aa1.39□□□□□ -2.19
SSN8YNL025C YLL006W-AQ3E814 58 aa1.39□□□□□ -2.19
SSN8YNL025C POL2P21951 2222 aaKnown RBP1.39□□□□□ -2.19
SSN8YNL025C YBL044WP38194 122 aa1.38□□□□□ -2.19
SSN8YNL025C YDR524C-BQ3E6R4 66 aa1.38□□□□□ -2.19
SSN8YNL025C YGR146C-AQ8TGT9 53 aa1.38□□□□□ -2.19
SSN8YNL025C YMR105W-AQ8TGS8 64 aa1.37□□□□□ -2.19
SSN8YNL025C RPL37BP51402 88 aaKnown RBP1.36□□□□□ -2.19
SSN8YNL025C SEN1Q00416 2231 aaKnown RBP1.35□□□□□ -2.19
SSN8YNL025C TOM1Q03280 3268 aa1.35□□□□□ -2.19
SSN8YNL025C PMP3P87284 55 aa1.35□□□□□ -2.19
SSN8YNL025C YJL133C-AQ3E7A3 74 aa1.35□□□□□ -2.19
SSN8YNL025C RPL39P04650 51 aa1.34□□□□□ -2.19
SSN8YNL025C HOR7Q05827 59 aa1.34□□□□□ -2.19
SSN8YNL025C YCR108CQ3E819 63 aa1.34□□□□□ -2.19
SSN8YNL025C IRA2P19158 3079 aa1.33□□□□□ -2.2
SSN8YNL025C DDR2P89113 61 aa1.33□□□□□ -2.2
SSN8YNL025C YJL127C-BQ3E828 52 aa1.32□□□□□ -2.2
SSN8YNL025C VPS13Q07878 3144 aa1.3□□□□□ -2.2
SSN8YNL025C RPS29BP41058 56 aaKnown RBP1.29□□□□□ -2.2
SSN8YNL025C CSF1Q12150 2958 aa1.29□□□□□ -2.2
SSN8YNL025C TRA1P38811 3744 aa1.27□□□□□ -2.21
SSN8YNL025C URA2P07259 2214 aaKnown RBP1.26□□□□□ -2.21
SSN8YNL025C YHR073W-AP0C5N7 58 aa1.24□□□□□ -2.21
SSN8YNL025C YOR316C-AQ3E806 69 aa1.22□□□□□ -2.21
SSN8YNL025C YOR072W-BQ3E832 53 aa1.22□□□□□ -2.21
SSN8YNL025C YLL066W-BQ8TGJ7 56 aa1.22□□□□□ -2.21
SSN8YNL025C IRA1P18963 3092 aa1.21□□□□□ -2.22
SSN8YNL025C TAO3P40468 2376 aa1.2□□□□□ -2.22
SSN8YNL025C GCN1P33892 2672 aaKnown RBP1.17□□□□□ -2.22
SSN8YNL025C Q0297Q9ZZV8 51 aa1.14□□□□□ -2.23
SSN8YNL025C YDR034W-BQ6Q5X2 51 aa1.13□□□□□ -2.23
SSN8YNL025C FMP27Q06179 2628 aa1.12□□□□□ -2.23
SSN8YNL025C YDR034C-AP0C289 58 aa1.1□□□□□ -2.23
SSN8YNL025C UTP20P35194 2493 aaKnown RBP1.1□□□□□ -2.23
SSN8YNL025C YPR117WQ06116 2489 aa1.09□□□□□ -2.24
SSN8YNL025C PRP8P33334 2413 aaKnown RBP1.08□□□□□ -2.24
SSN8YNL025C RPS29AP41057 56 aaKnown RBP1.08□□□□□ -2.24
SSN8YNL025C MEC1P38111 2368 aa1.05□□□□□ -2.24
SSN8YNL025C TOR2P32600 2474 aaKnown RBP1.04□□□□□ -2.24
SSN8YNL025C TEL1P38110 2787 aa1.02□□□□□ -2.25
SSN8YNL025C YBR056W-AI2HB52 66 aa1.02□□□□□ -2.25
SSN8YNL025C DYN1P36022 4092 aa1□□□□□ -2.25
SSN8YNL025C YML054C-AQ3E809 52 aa0.99□□□□□ -2.25
SSN8YNL025C NUM1Q00402 2748 aa0.98□□□□□ -2.25
SSN8YNL025C Q0017Q9ZZX8 53 aa0.96□□□□□ -2.26
SSN8YNL025C TOR1P35169 2470 aa0.94□□□□□ -2.26
SSN8YNL025C YHR050W-AQ05451 56 aa0.91□□□□□ -2.26
SSN8YNL025C MDN1Q12019 4910 aaKnown RBP0.76□□□□□ -2.29
SSN8YNL025C CUP1-1P0CX80 61 aa0.72□□□□□ -2.29
SSN8YNL025C CUP1-2P0CX81 61 aa0.72□□□□□ -2.29
Retrieved 63 of 5,963 RNA–protein pairs in 39.2 ms