RNA–Protein interactions for RNA: YMR235C

RNA1, Transcript of GTPase activating protein (GAP) for Gsp1p, yeastyeast

Gene RNA1, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNA1YMR235C NUP192P47054 1683 aa1.07□□□□□ -2.24
RNA1YMR235C YPR010C-AA5Z2X5 72 aa1.05□□□□□ -2.24
RNA1YMR235C RKR1Q04781 1562 aa1.01□□□□□ -2.25
RNA1YMR235C BUD3P25558 1636 aa1□□□□□ -2.25
RNA1YMR235C THO2P53552 1597 aaKnown RBP0.97□□□□□ -2.25
RNA1YMR235C STU1P38198 1513 aa0.97□□□□□ -2.25
RNA1YMR235C YLL006W-AQ3E814 58 aa0.94□□□□□ -2.26
RNA1YMR235C COA2Q3E823 68 aa0.94□□□□□ -2.26
RNA1YMR235C HIR3P47171 1648 aa0.92□□□□□ -2.26
RNA1YMR235C NUP170P38181 1502 aa0.9□□□□□ -2.26
RNA1YMR235C RPS29AP41057 56 aaKnown RBP0.9□□□□□ -2.27
RNA1YMR235C YDR524C-BQ3E6R4 66 aa0.9□□□□□ -2.27
RNA1YMR235C YGL258W-AQ3E740 77 aa0.89□□□□□ -2.27
RNA1YMR235C YOR072W-BQ3E832 53 aa0.86□□□□□ -2.27
RNA1YMR235C UTP20P35194 2493 aaKnown RBP0.79□□□□□ -2.28
RNA1YMR235C ATG2P53855 1592 aa0.79□□□□□ -2.28
RNA1YMR235C GCN2P15442 1659 aa0.79□□□□□ -2.28
RNA1YMR235C FIG2P25653 1609 aa0.78□□□□□ -2.29
RNA1YMR235C TOR1P35169 2470 aa0.72□□□□□ -2.29
RNA1YMR235C YOR316C-AQ3E806 69 aa0.67□□□□□ -2.3
RNA1YMR235C YJL133C-AQ3E7A3 74 aa0.66□□□□□ -2.3
RNA1YMR235C YLR342W-AQ3E810 57 aa0.65□□□□□ -2.31
RNA1YMR235C COX9P07255 59 aa0.63□□□□□ -2.31
RNA1YMR235C DDR2P89113 61 aa0.6□□□□□ -2.31
RNA1YMR235C MLP2P40457 1679 aa0.57□□□□□ -2.32
RNA1YMR235C FLO1P32768 1537 aa0.57□□□□□ -2.32
RNA1YMR235C YHR050W-AQ05451 56 aa0.55□□□□□ -2.32
RNA1YMR235C YDR034C-AP0C289 58 aa0.52□□□□□ -2.33
RNA1YMR235C CHC1P22137 1653 aaKnown RBP0.51□□□□□ -2.33
RNA1YMR235C SMX2P40204 77 aaKnown RBP0.5□□□□□ -2.33
RNA1YMR235C RPL29P05747 59 aaPredicted RBP0.43□□□□□ -2.34
RNA1YMR235C YJL127C-BQ3E828 52 aa0.38□□□□□ -2.35
RNA1YMR235C TOR2P32600 2474 aaKnown RBP0.35□□□□□ -2.35
RNA1YMR235C YHR073W-AP0C5N7 58 aa0.34□□□□□ -2.36
RNA1YMR235C MEC1P38111 2368 aa0.31□□□□□ -2.36
RNA1YMR235C FMP27Q06179 2628 aa0.29□□□□□ -2.36
RNA1YMR235C Q0017Q9ZZX8 53 aa0.29□□□□□ -2.36
RNA1YMR235C YML054C-AQ3E809 52 aa0.27□□□□□ -2.37
RNA1YMR235C YPR117WQ06116 2489 aa0.27□□□□□ -2.37
RNA1YMR235C DYN1P36022 4092 aa0.24□□□□□ -2.37
RNA1YMR235C TOM7P53507 60 aa0.22□□□□□ -2.37
RNA1YMR235C YBR056W-AI2HB52 66 aa0.14□□□□□ -2.39
RNA1YMR235C PMP3P87284 55 aa0.1□□□□□ -2.39
RNA1YMR235C GCN1P33892 2672 aaKnown RBP-0.01□□□□□ -2.41
RNA1YMR235C HOR7Q05827 59 aa-0.02□□□□□ -2.41
RNA1YMR235C TEL1P38110 2787 aa-0.02□□□□□ -2.41
RNA1YMR235C CSF1Q12150 2958 aa-0.03□□□□□ -2.41
RNA1YMR235C TRA1P38811 3744 aa-0.13□□□□□ -2.43
RNA1YMR235C IRA1P18963 3092 aa-0.19□□□□□ -2.44
RNA1YMR235C YMR105W-AQ8TGS8 64 aa-0.25□□□□□ -2.45
RNA1YMR235C CUP1-1P0CX80 61 aa-0.29□□□□□ -2.46
RNA1YMR235C CUP1-2P0CX81 61 aa-0.29□□□□□ -2.46
RNA1YMR235C NCE101Q02820 53 aa-0.33□□□□□ -2.46
RNA1YMR235C MDN1Q12019 4910 aaKnown RBP-0.33□□□□□ -2.46
RNA1YMR235C IRA2P19158 3079 aa-0.4□□□□□ -2.47
RNA1YMR235C NUM1Q00402 2748 aa-0.43□□□□□ -2.48
RNA1YMR235C VPS13Q07878 3144 aa-0.48□□□□□ -2.49
RNA1YMR235C YLL066W-BQ8TGJ7 56 aa-0.5□□□□□ -2.49
RNA1YMR235C RPL39P04650 51 aa-0.89□□□□□ -2.55
RNA1YMR235C TOM1Q03280 3268 aa-1.04□□□□□ -2.58
RNA1YMR235C YIL046W-AQ3E7Z4 54 aa-1.45□□□□□ -2.64
RNA1YMR235C Q0297Q9ZZV8 51 aa-1.68□□□□□ -2.68
RNA1YMR235C YDR034W-BQ6Q5X2 51 aa-1.87□□□□□ -2.71
Retrieved 63 of 5,963 RNA–protein pairs in 46.5 ms