RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C RPS27BP38711 82 aa1□□□□□ -2.25
SUB1YMR039C YPR010C-AA5Z2X5 72 aa0.99□□□□□ -2.25
SUB1YMR039C YFR009W-AP0C5M9 85 aa0.98□□□□□ -2.25
SUB1YMR039C RPS29BP41058 56 aaKnown RBP0.98□□□□□ -2.25
SUB1YMR039C SEN1Q00416 2231 aaKnown RBP0.98□□□□□ -2.25
SUB1YMR039C YBL044WP38194 122 aa0.97□□□□□ -2.25
SUB1YMR039C YBR230W-AQ3E762 66 aa0.95□□□□□ -2.26
SUB1YMR039C YCR108CQ3E819 63 aa0.94□□□□□ -2.26
SUB1YMR039C PRP8P33334 2413 aaKnown RBP0.93□□□□□ -2.26
SUB1YMR039C TOS6P48560 102 aa0.92□□□□□ -2.26
SUB1YMR039C SIP18P50263 79 aa0.91□□□□□ -2.26
SUB1YMR039C YGR146C-AQ8TGT9 53 aa0.89□□□□□ -2.27
SUB1YMR039C COA2Q3E823 68 aa0.83□□□□□ -2.28
SUB1YMR039C TAO3P40468 2376 aa0.83□□□□□ -2.28
SUB1YMR039C YOR008C-AQ3E7B9 74 aa0.82□□□□□ -2.28
SUB1YMR039C YLR342W-AQ3E810 57 aa0.82□□□□□ -2.28
SUB1YMR039C YJL133C-AQ3E7A3 74 aa0.8□□□□□ -2.28
SUB1YMR039C YLL006W-AQ3E814 58 aa0.76□□□□□ -2.29
SUB1YMR039C DDR2P89113 61 aa0.75□□□□□ -2.29
SUB1YMR039C FLO1P32768 1537 aa0.74□□□□□ -2.29
SUB1YMR039C TOM7P53507 60 aa0.73□□□□□ -2.29
SUB1YMR039C YDR524C-BQ3E6R4 66 aa0.73□□□□□ -2.29
SUB1YMR039C YOR072W-BQ3E832 53 aa0.73□□□□□ -2.29
SUB1YMR039C COX9P07255 59 aa0.72□□□□□ -2.29
SUB1YMR039C YOR316C-AQ3E806 69 aa0.72□□□□□ -2.29
SUB1YMR039C YGL258W-AQ3E740 77 aa0.7□□□□□ -2.3
SUB1YMR039C RPL29P05747 59 aaPredicted RBP0.66□□□□□ -2.3
SUB1YMR039C YJL127C-BQ3E828 52 aa0.66□□□□□ -2.3
SUB1YMR039C UTP20P35194 2493 aaKnown RBP0.65□□□□□ -2.3
SUB1YMR039C TOR1P35169 2470 aa0.64□□□□□ -2.31
SUB1YMR039C RPS29AP41057 56 aaKnown RBP0.63□□□□□ -2.31
SUB1YMR039C YDR034C-AP0C289 58 aa0.62□□□□□ -2.31
SUB1YMR039C YHR073W-AP0C5N7 58 aa0.59□□□□□ -2.31
SUB1YMR039C TRA1P38811 3744 aa0.54□□□□□ -2.32
SUB1YMR039C CSF1Q12150 2958 aa0.54□□□□□ -2.32
SUB1YMR039C MEC1P38111 2368 aa0.52□□□□□ -2.33
SUB1YMR039C DYN1P36022 4092 aa0.51□□□□□ -2.33
SUB1YMR039C TOR2P32600 2474 aaKnown RBP0.5□□□□□ -2.33
SUB1YMR039C YHR050W-AQ05451 56 aa0.49□□□□□ -2.33
SUB1YMR039C GCN1P33892 2672 aaKnown RBP0.48□□□□□ -2.33
SUB1YMR039C PMP3P87284 55 aa0.47□□□□□ -2.33
SUB1YMR039C HOR7Q05827 59 aa0.47□□□□□ -2.33
SUB1YMR039C FMP27Q06179 2628 aa0.46□□□□□ -2.34
SUB1YMR039C IRA1P18963 3092 aa0.45□□□□□ -2.34
SUB1YMR039C NCE101Q02820 53 aa0.43□□□□□ -2.34
SUB1YMR039C YPR117WQ06116 2489 aa0.42□□□□□ -2.34
SUB1YMR039C Q0017Q9ZZX8 53 aa0.41□□□□□ -2.34
SUB1YMR039C TEL1P38110 2787 aa0.4□□□□□ -2.35
SUB1YMR039C YML054C-AQ3E809 52 aa0.39□□□□□ -2.35
SUB1YMR039C VPS13Q07878 3144 aa0.36□□□□□ -2.35
SUB1YMR039C IRA2P19158 3079 aa0.35□□□□□ -2.35
SUB1YMR039C NUM1Q00402 2748 aa0.32□□□□□ -2.36
SUB1YMR039C YBR056W-AI2HB52 66 aa0.29□□□□□ -2.36
SUB1YMR039C YLL066W-BQ8TGJ7 56 aa0.24□□□□□ -2.37
SUB1YMR039C YMR105W-AQ8TGS8 64 aa0.23□□□□□ -2.37
SUB1YMR039C RPL39P04650 51 aa0.17□□□□□ -2.38
SUB1YMR039C CUP1-1P0CX80 61 aa0.11□□□□□ -2.39
SUB1YMR039C CUP1-2P0CX81 61 aa0.11□□□□□ -2.39
SUB1YMR039C MDN1Q12019 4910 aaKnown RBP0.09□□□□□ -2.4
SUB1YMR039C TOM1Q03280 3268 aa0.06□□□□□ -2.4
SUB1YMR039C YIL046W-AQ3E7Z4 54 aa-0.02□□□□□ -2.41
SUB1YMR039C Q0297Q9ZZV8 51 aa-0.28□□□□□ -2.45
SUB1YMR039C YDR034W-BQ6Q5X2 51 aa-0.85□□□□□ -2.55
Retrieved 63 of 5,963 RNA–protein pairs in 53.6 ms