RNA–Protein interactions for RNA: YLR263W

RED1, Transcript of Protein component of the synaptonemal complex axial elements, yeastyeast

Gene RED1, Length 2,484 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RED1YLR263W YPR010C-AA5Z2X5 72 aa0.44□□□□□ -2.34
RED1YLR263W USO1P25386 1790 aa0.42□□□□□ -2.34
RED1YLR263W RPS29AP41057 56 aaKnown RBP0.41□□□□□ -2.34
RED1YLR263W SSK2P53599 1579 aa0.4□□□□□ -2.34
RED1YLR263W MDN1Q12019 4910 aaKnown RBP0.38□□□□□ -2.35
RED1YLR263W ULS1Q08562 1619 aa0.38□□□□□ -2.35
RED1YLR263W YGL258W-AQ3E740 77 aa0.37□□□□□ -2.35
RED1YLR263W PEP1P32319 1579 aa0.36□□□□□ -2.35
RED1YLR263W NUP192P47054 1683 aa0.35□□□□□ -2.35
RED1YLR263W YDR524C-BQ3E6R4 66 aa0.31□□□□□ -2.36
RED1YLR263W YOR072W-BQ3E832 53 aa0.31□□□□□ -2.36
RED1YLR263W BUD3P25558 1636 aa0.3□□□□□ -2.36
RED1YLR263W COA2Q3E823 68 aa0.3□□□□□ -2.36
RED1YLR263W TOR2P32600 2474 aaKnown RBP0.29□□□□□ -2.36
RED1YLR263W FMP27Q06179 2628 aa0.28□□□□□ -2.37
RED1YLR263W MEC1P38111 2368 aa0.27□□□□□ -2.37
RED1YLR263W YPR117WQ06116 2489 aa0.26□□□□□ -2.37
RED1YLR263W STU1P38198 1513 aa0.26□□□□□ -2.37
RED1YLR263W RKR1Q04781 1562 aa0.24□□□□□ -2.37
RED1YLR263W HIR3P47171 1648 aa0.23□□□□□ -2.37
RED1YLR263W FIG2P25653 1609 aa0.19□□□□□ -2.38
RED1YLR263W GCN2P15442 1659 aa0.18□□□□□ -2.38
RED1YLR263W NUP170P38181 1502 aa0.17□□□□□ -2.38
RED1YLR263W THO2P53552 1597 aaKnown RBP0.16□□□□□ -2.38
RED1YLR263W ATG2P53855 1592 aa0.15□□□□□ -2.39
RED1YLR263W YOR316C-AQ3E806 69 aa0.13□□□□□ -2.39
RED1YLR263W TEL1P38110 2787 aa0.13□□□□□ -2.39
RED1YLR263W YJL133C-AQ3E7A3 74 aa0.11□□□□□ -2.39
RED1YLR263W YHR050W-AQ05451 56 aa0.1□□□□□ -2.39
RED1YLR263W YLR342W-AQ3E810 57 aa0.09□□□□□ -2.39
RED1YLR263W GCN1P33892 2672 aaKnown RBP0.06□□□□□ -2.4
RED1YLR263W FLO1P32768 1537 aa0.06□□□□□ -2.4
RED1YLR263W YDR034C-AP0C289 58 aa0.05□□□□□ -2.4
RED1YLR263W CSF1Q12150 2958 aa0.05□□□□□ -2.4
RED1YLR263W DDR2P89113 61 aa0.03□□□□□ -2.4
RED1YLR263W TRA1P38811 3744 aa0.01□□□□□ -2.41
RED1YLR263W COX9P07255 59 aa0.01□□□□□ -2.41
RED1YLR263W RPL29P05747 59 aaPredicted RBP-0.02□□□□□ -2.41
RED1YLR263W DYN1P36022 4092 aa-0.09□□□□□ -2.42
RED1YLR263W IRA1P18963 3092 aa-0.11□□□□□ -2.43
RED1YLR263W NUM1Q00402 2748 aa-0.11□□□□□ -2.43
RED1YLR263W Q0017Q9ZZX8 53 aa-0.13□□□□□ -2.43
RED1YLR263W SMX2P40204 77 aaKnown RBP-0.14□□□□□ -2.43
RED1YLR263W YJL127C-BQ3E828 52 aa-0.15□□□□□ -2.43
RED1YLR263W YHR073W-AP0C5N7 58 aa-0.17□□□□□ -2.44
RED1YLR263W MLP2P40457 1679 aa-0.17□□□□□ -2.44
RED1YLR263W CUP1-1P0CX80 61 aa-0.18□□□□□ -2.44
RED1YLR263W CUP1-2P0CX81 61 aa-0.18□□□□□ -2.44
RED1YLR263W YML054C-AQ3E809 52 aa-0.19□□□□□ -2.44
RED1YLR263W IRA2P19158 3079 aa-0.21□□□□□ -2.44
RED1YLR263W CHC1P22137 1653 aaKnown RBP-0.24□□□□□ -2.45
RED1YLR263W VPS13Q07878 3144 aa-0.25□□□□□ -2.45
RED1YLR263W TOM7P53507 60 aa-0.26□□□□□ -2.45
RED1YLR263W PMP3P87284 55 aa-0.42□□□□□ -2.48
RED1YLR263W YMR105W-AQ8TGS8 64 aa-0.44□□□□□ -2.48
RED1YLR263W HOR7Q05827 59 aa-0.53□□□□□ -2.49
RED1YLR263W YLL066W-BQ8TGJ7 56 aa-0.67□□□□□ -2.52
RED1YLR263W NCE101Q02820 53 aa-0.76□□□□□ -2.53
RED1YLR263W TOM1Q03280 3268 aa-0.96□□□□□ -2.56
RED1YLR263W RPL39P04650 51 aa-1.05□□□□□ -2.58
RED1YLR263W YDR034W-BQ6Q5X2 51 aa-1.15□□□□□ -2.59
RED1YLR263W YIL046W-AQ3E7Z4 54 aa-1.29□□□□□ -2.62
RED1YLR263W Q0297Q9ZZV8 51 aa-1.29□□□□□ -2.62
Retrieved 63 of 5,963 RNA–protein pairs in 4.8 ms