RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	YPR010C-A	A5Z2X5	72 aa		0.82	□□□□□ -2.28
EBP2	YKL172W	RKR1	Q04781	1562 aa		0.81	□□□□□ -2.28
EBP2	YKL172W	NUP192	P47054	1683 aa		0.79	□□□□□ -2.28
EBP2	YKL172W	THO2	P53552	1597 aa	Known RBP	0.76	□□□□□ -2.29
EBP2	YKL172W	YDR524C-B	Q3E6R4	66 aa		0.76	□□□□□ -2.29
EBP2	YKL172W	TAO3	P40468	2376 aa		0.76	□□□□□ -2.29
EBP2	YKL172W	STU1	P38198	1513 aa		0.74	□□□□□ -2.29
EBP2	YKL172W	YGL258W-A	Q3E740	77 aa		0.74	□□□□□ -2.29
EBP2	YKL172W	BUD3	P25558	1636 aa		0.74	□□□□□ -2.29
EBP2	YKL172W	NUP170	P38181	1502 aa		0.74	□□□□□ -2.29
EBP2	YKL172W	YLL006W-A	Q3E814	58 aa		0.72	□□□□□ -2.29
EBP2	YKL172W	YOR072W-B	Q3E832	53 aa		0.72	□□□□□ -2.29
EBP2	YKL172W	RPS29A	P41057	56 aa	Known RBP	0.71	□□□□□ -2.3
EBP2	YKL172W	HIR3	P47171	1648 aa		0.71	□□□□□ -2.3
EBP2	YKL172W	COX9	P07255	59 aa		0.7	□□□□□ -2.3
EBP2	YKL172W	YOR316C-A	Q3E806	69 aa		0.64	□□□□□ -2.31
EBP2	YKL172W	ATG2	P53855	1592 aa		0.64	□□□□□ -2.31
EBP2	YKL172W	SMX2	P40204	77 aa	Known RBP	0.63	□□□□□ -2.31
EBP2	YKL172W	YLR342W-A	Q3E810	57 aa		0.63	□□□□□ -2.31
EBP2	YKL172W	YBR056W-A	I2HB52	66 aa		0.62	□□□□□ -2.31
EBP2	YKL172W	YJL133C-A	Q3E7A3	74 aa		0.62	□□□□□ -2.31
EBP2	YKL172W	DDR2	P89113	61 aa		0.61	□□□□□ -2.31
EBP2	YKL172W	FIG2	P25653	1609 aa		0.59	□□□□□ -2.32
EBP2	YKL172W	GCN2	P15442	1659 aa		0.58	□□□□□ -2.32
EBP2	YKL172W	MLP2	P40457	1679 aa		0.57	□□□□□ -2.32
EBP2	YKL172W	UTP20	P35194	2493 aa	Known RBP	0.55	□□□□□ -2.32
EBP2	YKL172W	TOR1	P35169	2470 aa		0.54	□□□□□ -2.32
EBP2	YKL172W	YDR034C-A	P0C289	58 aa		0.53	□□□□□ -2.32
EBP2	YKL172W	CHC1	P22137	1653 aa	Known RBP	0.53	□□□□□ -2.33
EBP2	YKL172W	YHR050W-A	Q05451	56 aa		0.51	□□□□□ -2.33
EBP2	YKL172W	FLO1	P32768	1537 aa		0.5	□□□□□ -2.33
EBP2	YKL172W	YJL127C-B	Q3E828	52 aa		0.48	□□□□□ -2.33
EBP2	YKL172W	RPL29	P05747	59 aa	Predicted RBP	0.47	□□□□□ -2.33
EBP2	YKL172W	YHR073W-A	P0C5N7	58 aa		0.45	□□□□□ -2.34
EBP2	YKL172W	YML054C-A	Q3E809	52 aa		0.42	□□□□□ -2.34
EBP2	YKL172W	TOM7	P53507	60 aa		0.4	□□□□□ -2.35
EBP2	YKL172W	Q0017	Q9ZZX8	53 aa		0.4	□□□□□ -2.35
EBP2	YKL172W	PMP3	P87284	55 aa		0.36	□□□□□ -2.35
EBP2	YKL172W	NUM1	Q00402	2748 aa		0.31	□□□□□ -2.36
EBP2	YKL172W	TOR2	P32600	2474 aa	Known RBP	0.3	□□□□□ -2.36
EBP2	YKL172W	HOR7	Q05827	59 aa		0.29	□□□□□ -2.36
EBP2	YKL172W	FMP27	Q06179	2628 aa		0.28	□□□□□ -2.37
EBP2	YKL172W	MEC1	P38111	2368 aa		0.26	□□□□□ -2.37
EBP2	YKL172W	CUP1-1	P0CX80	61 aa		0.26	□□□□□ -2.37
EBP2	YKL172W	CUP1-2	P0CX81	61 aa		0.26	□□□□□ -2.37
EBP2	YKL172W	YPR117W	Q06116	2489 aa		0.26	□□□□□ -2.37
EBP2	YKL172W	GCN1	P33892	2672 aa	Known RBP	0.24	□□□□□ -2.37
EBP2	YKL172W	MDN1	Q12019	4910 aa	Known RBP	0.19	□□□□□ -2.38
EBP2	YKL172W	TEL1	P38110	2787 aa		0.19	□□□□□ -2.38
EBP2	YKL172W	NCE101	Q02820	53 aa		0.15	□□□□□ -2.39
EBP2	YKL172W	DYN1	P36022	4092 aa		0.13	□□□□□ -2.39
EBP2	YKL172W	YMR105W-A	Q8TGS8	64 aa		0.13	□□□□□ -2.39
EBP2	YKL172W	CSF1	Q12150	2958 aa		0.12	□□□□□ -2.39
EBP2	YKL172W	IRA2	P19158	3079 aa		0.1	□□□□□ -2.39
EBP2	YKL172W	VPS13	Q07878	3144 aa		0.07	□□□□□ -2.4
EBP2	YKL172W	IRA1	P18963	3092 aa		0.07	□□□□□ -2.4
EBP2	YKL172W	TOM1	Q03280	3268 aa		0.06	□□□□□ -2.4
EBP2	YKL172W	TRA1	P38811	3744 aa		0	□□□□□ -2.41
EBP2	YKL172W	YLL066W-B	Q8TGJ7	56 aa		-0.01	□□□□□ -2.41
EBP2	YKL172W	YDR034W-B	Q6Q5X2	51 aa		-0.19	□□□□□ -2.44
EBP2	YKL172W	RPL39	P04650	51 aa		-0.21	□□□□□ -2.44
EBP2	YKL172W	Q0297	Q9ZZV8	51 aa		-0.27	□□□□□ -2.45
EBP2	YKL172W	YIL046W-A	Q3E7Z4	54 aa		-0.28	□□□□□ -2.45

Retrieved 63 of 5,963 RNA–protein pairs in 740.5 ms