RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W YGR025WP53216 100 aa0.89□□□□□ -2.27
YJR028WYJR028W PMP3P87284 55 aa0.89□□□□□ -2.27
YJR028WYJR028W NCE101Q02820 53 aa0.89□□□□□ -2.27
YJR028WYJR028W YOL097W-AQ3E7Y9 61 aa0.89□□□□□ -2.27
YJR028WYJR028W YBL039W-BP0C268 59 aa0.88□□□□□ -2.27
YJR028WYJR028W YFR009W-AP0C5M9 85 aa0.88□□□□□ -2.27
YJR028WYJR028W OLI1P61829 76 aa0.88□□□□□ -2.27
YJR028WYJR028W YJL133C-AQ3E7A3 74 aa0.88□□□□□ -2.27
YJR028WYJR028W YLL006W-AQ3E814 58 aa0.88□□□□□ -2.27
YJR028WYJR028W YMR122W-AQ3E842 84 aa0.87□□□□□ -2.27
YJR028WYJR028W YBR230W-AQ3E762 66 aa0.86□□□□□ -2.27
YJR028WYJR028W YJL127C-BQ3E828 52 aa0.86□□□□□ -2.27
YJR028WYJR028W FIG2P25653 1609 aa0.85□□□□□ -2.27
YJR028WYJR028W DDR2P89113 61 aa0.85□□□□□ -2.27
YJR028WYJR028W YBR200W-AQ3E755 54 aa0.85□□□□□ -2.27
YJR028WYJR028W YOR011W-AQ3E807 68 aa0.85□□□□□ -2.27
YJR028WYJR028W RPL29P05747 59 aaPredicted RBP0.84□□□□□ -2.28
YJR028WYJR028W YBL044WP38194 122 aa0.84□□□□□ -2.28
YJR028WYJR028W RPS27AP35997 82 aaKnown RBP0.83□□□□□ -2.28
YJR028WYJR028W YBR016WP38216 128 aa0.83□□□□□ -2.28
YJR028WYJR028W RPS27BP38711 82 aa0.83□□□□□ -2.28
YJR028WYJR028W HOR7Q05827 59 aa0.83□□□□□ -2.28
YJR028WYJR028W RPL39P04650 51 aa0.82□□□□□ -2.28
YJR028WYJR028W YOR394C-AQ8TGJ0 55 aa0.82□□□□□ -2.28
YJR028WYJR028W YMR105W-AQ8TGS8 64 aa0.8□□□□□ -2.28
YJR028WYJR028W YGR146C-AQ8TGT9 53 aa0.8□□□□□ -2.28
YJR028WYJR028W YOR316C-AQ3E806 69 aa0.78□□□□□ -2.28
YJR028WYJR028W YCR108CQ3E819 63 aa0.77□□□□□ -2.29
YJR028WYJR028W YOR072W-BQ3E832 53 aa0.77□□□□□ -2.29
YJR028WYJR028W YHR073W-AP0C5N7 58 aa0.76□□□□□ -2.29
YJR028WYJR028W YDR524C-BQ3E6R4 66 aa0.75□□□□□ -2.29
YJR028WYJR028W BPH1P25356 2167 aa0.75□□□□□ -2.29
YJR028WYJR028W TAO3P40468 2376 aa0.75□□□□□ -2.29
YJR028WYJR028W YDR034C-AP0C289 58 aa0.74□□□□□ -2.29
YJR028WYJR028W YIL046W-AQ3E7Z4 54 aa0.72□□□□□ -2.29
YJR028WYJR028W VPS13Q07878 3144 aa0.71□□□□□ -2.3
YJR028WYJR028W YML054C-AQ3E809 52 aa0.7□□□□□ -2.3
YJR028WYJR028W YLL066W-BQ8TGJ7 56 aa0.68□□□□□ -2.3
YJR028WYJR028W IRA2P19158 3079 aa0.67□□□□□ -2.3
YJR028WYJR028W SEN1Q00416 2231 aaKnown RBP0.67□□□□□ -2.3
YJR028WYJR028W Q0017Q9ZZX8 53 aa0.64□□□□□ -2.31
YJR028WYJR028W Q0297Q9ZZV8 51 aa0.64□□□□□ -2.31
YJR028WYJR028W TOM1Q03280 3268 aa0.62□□□□□ -2.31
YJR028WYJR028W YHR050W-AQ05451 56 aa0.62□□□□□ -2.31
YJR028WYJR028W IRA1P18963 3092 aa0.61□□□□□ -2.31
YJR028WYJR028W CSF1Q12150 2958 aa0.58□□□□□ -2.32
YJR028WYJR028W RPS29AP41057 56 aaKnown RBP0.57□□□□□ -2.32
YJR028WYJR028W TRA1P38811 3744 aa0.54□□□□□ -2.32
YJR028WYJR028W MEC1P38111 2368 aa0.5□□□□□ -2.33
YJR028WYJR028W YDR034W-BQ6Q5X2 51 aa0.5□□□□□ -2.33
YJR028WYJR028W DYN1P36022 4092 aa0.48□□□□□ -2.33
YJR028WYJR028W GCN1P33892 2672 aaKnown RBP0.47□□□□□ -2.33
YJR028WYJR028W YBR056W-AI2HB52 66 aa0.46□□□□□ -2.34
YJR028WYJR028W FMP27Q06179 2628 aa0.46□□□□□ -2.34
YJR028WYJR028W CUP1-1P0CX80 61 aa0.43□□□□□ -2.34
YJR028WYJR028W CUP1-2P0CX81 61 aa0.43□□□□□ -2.34
YJR028WYJR028W NUM1Q00402 2748 aa0.43□□□□□ -2.34
YJR028WYJR028W TEL1P38110 2787 aa0.41□□□□□ -2.34
YJR028WYJR028W UTP20P35194 2493 aaKnown RBP0.39□□□□□ -2.35
YJR028WYJR028W TOR2P32600 2474 aaKnown RBP0.37□□□□□ -2.35
YJR028WYJR028W TOR1P35169 2470 aa0.37□□□□□ -2.35
YJR028WYJR028W YPR117WQ06116 2489 aa0.35□□□□□ -2.35
YJR028WYJR028W MDN1Q12019 4910 aaKnown RBP0.32□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 10.7 ms