RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W SPT6P23615 1451 aaKnown RBP0.04□□□□□ -2.4
SNX4YJL036W TOR2P32600 2474 aaKnown RBP0.03□□□□□ -2.4
SNX4YJL036W YGL258W-AQ3E740 77 aa0.02□□□□□ -2.41
SNX4YJL036W SSK2P53599 1579 aa0.02□□□□□ -2.41
SNX4YJL036W YPR117WQ06116 2489 aa0.01□□□□□ -2.41
SNX4YJL036W YOR072W-BQ3E832 53 aa0.01□□□□□ -2.41
SNX4YJL036W MON2P48563 1636 aaPredicted RBP-0.01□□□□□ -2.41
SNX4YJL036W GCN1P33892 2672 aaKnown RBP-0.01□□□□□ -2.41
SNX4YJL036W MEC1P38111 2368 aa-0.02□□□□□ -2.41
SNX4YJL036W FMP27Q06179 2628 aa-0.02□□□□□ -2.41
SNX4YJL036W YBR056W-AI2HB52 66 aa-0.03□□□□□ -2.41
SNX4YJL036W YPR010C-AA5Z2X5 72 aa-0.04□□□□□ -2.42
SNX4YJL036W IRA1P18963 3092 aa-0.05□□□□□ -2.42
SNX4YJL036W TEL1P38110 2787 aa-0.05□□□□□ -2.42
SNX4YJL036W USO1P25386 1790 aa-0.05□□□□□ -2.42
SNX4YJL036W BUD3P25558 1636 aa-0.05□□□□□ -2.42
SNX4YJL036W CSF1Q12150 2958 aa-0.06□□□□□ -2.42
SNX4YJL036W NUM1Q00402 2748 aa-0.06□□□□□ -2.42
SNX4YJL036W IRA2P19158 3079 aa-0.07□□□□□ -2.42
SNX4YJL036W YHR050W-AQ05451 56 aa-0.07□□□□□ -2.42
SNX4YJL036W VPS13Q07878 3144 aa-0.08□□□□□ -2.42
SNX4YJL036W TOM1Q03280 3268 aa-0.09□□□□□ -2.42
SNX4YJL036W NUP192P47054 1683 aa-0.09□□□□□ -2.42
SNX4YJL036W DYN1P36022 4092 aa-0.1□□□□□ -2.43
SNX4YJL036W MDN1Q12019 4910 aaKnown RBP-0.12□□□□□ -2.43
SNX4YJL036W CUP1-1P0CX80 61 aa-0.13□□□□□ -2.43
SNX4YJL036W CUP1-2P0CX81 61 aa-0.13□□□□□ -2.43
SNX4YJL036W Q0017Q9ZZX8 53 aa-0.13□□□□□ -2.43
SNX4YJL036W TRA1P38811 3744 aa-0.13□□□□□ -2.43
SNX4YJL036W YML054C-AQ3E809 52 aa-0.14□□□□□ -2.43
SNX4YJL036W ULS1Q08562 1619 aa-0.14□□□□□ -2.43
SNX4YJL036W RPL29P05747 59 aaPredicted RBP-0.15□□□□□ -2.43
SNX4YJL036W YDR034C-AP0C289 58 aa-0.15□□□□□ -2.43
SNX4YJL036W YMR105W-AQ8TGS8 64 aa-0.15□□□□□ -2.43
SNX4YJL036W YHR073W-AP0C5N7 58 aa-0.16□□□□□ -2.44
SNX4YJL036W YJL133C-AQ3E7A3 74 aa-0.17□□□□□ -2.44
SNX4YJL036W YOR316C-AQ3E806 69 aa-0.17□□□□□ -2.44
SNX4YJL036W STU1P38198 1513 aa-0.18□□□□□ -2.44
SNX4YJL036W COX9P07255 59 aa-0.19□□□□□ -2.44
SNX4YJL036W DDR2P89113 61 aa-0.19□□□□□ -2.44
SNX4YJL036W YJL127C-BQ3E828 52 aa-0.19□□□□□ -2.44
SNX4YJL036W FIG2P25653 1609 aa-0.2□□□□□ -2.44
SNX4YJL036W TOM7P53507 60 aa-0.2□□□□□ -2.44
SNX4YJL036W PMP3P87284 55 aa-0.2□□□□□ -2.44
SNX4YJL036W YLR342W-AQ3E810 57 aa-0.2□□□□□ -2.44
SNX4YJL036W YLL066W-BQ8TGJ7 56 aa-0.2□□□□□ -2.44
SNX4YJL036W FLO1P32768 1537 aa-0.2□□□□□ -2.44
SNX4YJL036W THO2P53552 1597 aaKnown RBP-0.2□□□□□ -2.44
SNX4YJL036W SMX2P40204 77 aaKnown RBP-0.21□□□□□ -2.44
SNX4YJL036W NUP170P38181 1502 aa-0.23□□□□□ -2.45
SNX4YJL036W PEP1P32319 1579 aa-0.23□□□□□ -2.45
SNX4YJL036W HOR7Q05827 59 aa-0.23□□□□□ -2.45
SNX4YJL036W RKR1Q04781 1562 aa-0.23□□□□□ -2.45
SNX4YJL036W NCE101Q02820 53 aa-0.24□□□□□ -2.45
SNX4YJL036W ATG2P53855 1592 aa-0.24□□□□□ -2.45
SNX4YJL036W HIR3P47171 1648 aa-0.24□□□□□ -2.45
SNX4YJL036W RPL39P04650 51 aa-0.25□□□□□ -2.45
SNX4YJL036W Q0297Q9ZZV8 51 aa-0.25□□□□□ -2.45
SNX4YJL036W GCN2P15442 1659 aa-0.27□□□□□ -2.45
SNX4YJL036W YIL046W-AQ3E7Z4 54 aa-0.28□□□□□ -2.45
SNX4YJL036W CHC1P22137 1653 aaKnown RBP-0.29□□□□□ -2.46
SNX4YJL036W YDR034W-BQ6Q5X2 51 aa-0.3□□□□□ -2.46
SNX4YJL036W MLP2P40457 1679 aa-0.32□□□□□ -2.46
Retrieved 63 of 5,963 RNA–protein pairs in 58.1 ms