RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	YFR009W-A	P0C5M9	85 aa		1.14	□□□□□ -2.23
VHR1	YIL056W	YBR230W-A	Q3E762	66 aa		1.14	□□□□□ -2.23
VHR1	YIL056W	YBR016W	P38216	128 aa		1.13	□□□□□ -2.23
VHR1	YIL056W	RPS27B	P38711	82 aa		1.12	□□□□□ -2.23
VHR1	YIL056W	YBL044W	P38194	122 aa		1.11	□□□□□ -2.23
VHR1	YIL056W	SIP18	P50263	79 aa		1.11	□□□□□ -2.23
VHR1	YIL056W	TOS6	P48560	102 aa		1.08	□□□□□ -2.24
VHR1	YIL056W	RPL37B	P51402	88 aa	Known RBP	1.08	□□□□□ -2.24
VHR1	YIL056W	YCR108C	Q3E819	63 aa		1.08	□□□□□ -2.24
VHR1	YIL056W	YGR146C-A	Q8TGT9	53 aa		1.05	□□□□□ -2.24
VHR1	YIL056W	SEN1	Q00416	2231 aa	Known RBP	1.03	□□□□□ -2.24
VHR1	YIL056W	YOR008C-A	Q3E7B9	74 aa		1.01	□□□□□ -2.25
VHR1	YIL056W	YLR342W-A	Q3E810	57 aa		0.99	□□□□□ -2.25
VHR1	YIL056W	RPS29B	P41058	56 aa	Known RBP	0.97	□□□□□ -2.25
VHR1	YIL056W	YJL133C-A	Q3E7A3	74 aa		0.97	□□□□□ -2.25
VHR1	YIL056W	COA2	Q3E823	68 aa		0.97	□□□□□ -2.25
VHR1	YIL056W	PRP8	P33334	2413 aa	Known RBP	0.93	□□□□□ -2.26
VHR1	YIL056W	COX9	P07255	59 aa		0.93	□□□□□ -2.26
VHR1	YIL056W	DDR2	P89113	61 aa		0.91	□□□□□ -2.26
VHR1	YIL056W	YLL006W-A	Q3E814	58 aa		0.91	□□□□□ -2.26
VHR1	YIL056W	YOR072W-B	Q3E832	53 aa		0.9	□□□□□ -2.27
VHR1	YIL056W	YDR524C-B	Q3E6R4	66 aa		0.89	□□□□□ -2.27
VHR1	YIL056W	TOM7	P53507	60 aa		0.89	□□□□□ -2.27
VHR1	YIL056W	YGL258W-A	Q3E740	77 aa		0.89	□□□□□ -2.27
VHR1	YIL056W	YOR316C-A	Q3E806	69 aa		0.88	□□□□□ -2.27
VHR1	YIL056W	FLO1	P32768	1537 aa		0.85	□□□□□ -2.27
VHR1	YIL056W	YJL127C-B	Q3E828	52 aa		0.83	□□□□□ -2.28
VHR1	YIL056W	TAO3	P40468	2376 aa		0.82	□□□□□ -2.28
VHR1	YIL056W	RPL29	P05747	59 aa	Predicted RBP	0.81	□□□□□ -2.28
VHR1	YIL056W	NUM1	Q00402	2748 aa		0.79	□□□□□ -2.28
VHR1	YIL056W	YDR034C-A	P0C289	58 aa		0.77	□□□□□ -2.29
VHR1	YIL056W	RPS29A	P41057	56 aa	Known RBP	0.77	□□□□□ -2.29
VHR1	YIL056W	YHR073W-A	P0C5N7	58 aa		0.75	□□□□□ -2.29
VHR1	YIL056W	YPR117W	Q06116	2489 aa		0.66	□□□□□ -2.3
VHR1	YIL056W	PMP3	P87284	55 aa		0.66	□□□□□ -2.3
VHR1	YIL056W	YHR050W-A	Q05451	56 aa		0.64	□□□□□ -2.31
VHR1	YIL056W	TOR1	P35169	2470 aa		0.64	□□□□□ -2.31
VHR1	YIL056W	HOR7	Q05827	59 aa		0.64	□□□□□ -2.31
VHR1	YIL056W	UTP20	P35194	2493 aa	Known RBP	0.63	□□□□□ -2.31
VHR1	YIL056W	MDN1	Q12019	4910 aa	Known RBP	0.6	□□□□□ -2.31
VHR1	YIL056W	NCE101	Q02820	53 aa		0.59	□□□□□ -2.32
VHR1	YIL056W	YML054C-A	Q3E809	52 aa		0.57	□□□□□ -2.32
VHR1	YIL056W	Q0017	Q9ZZX8	53 aa		0.56	□□□□□ -2.32
VHR1	YIL056W	GCN1	P33892	2672 aa	Known RBP	0.56	□□□□□ -2.32
VHR1	YIL056W	FMP27	Q06179	2628 aa		0.55	□□□□□ -2.32
VHR1	YIL056W	TEL1	P38110	2787 aa		0.54	□□□□□ -2.32
VHR1	YIL056W	CUP1-1	P0CX80	61 aa		0.53	□□□□□ -2.32
VHR1	YIL056W	CUP1-2	P0CX81	61 aa		0.53	□□□□□ -2.32
VHR1	YIL056W	MEC1	P38111	2368 aa		0.5	□□□□□ -2.33
VHR1	YIL056W	TRA1	P38811	3744 aa		0.5	□□□□□ -2.33
VHR1	YIL056W	TOR2	P32600	2474 aa	Known RBP	0.49	□□□□□ -2.33
VHR1	YIL056W	TOM1	Q03280	3268 aa		0.48	□□□□□ -2.33
VHR1	YIL056W	DYN1	P36022	4092 aa		0.44	□□□□□ -2.34
VHR1	YIL056W	CSF1	Q12150	2958 aa		0.43	□□□□□ -2.34
VHR1	YIL056W	IRA2	P19158	3079 aa		0.42	□□□□□ -2.34
VHR1	YIL056W	VPS13	Q07878	3144 aa		0.41	□□□□□ -2.34
VHR1	YIL056W	IRA1	P18963	3092 aa		0.39	□□□□□ -2.35
VHR1	YIL056W	YMR105W-A	Q8TGS8	64 aa		0.36	□□□□□ -2.35
VHR1	YIL056W	YLL066W-B	Q8TGJ7	56 aa		0.34	□□□□□ -2.35
VHR1	YIL056W	RPL39	P04650	51 aa		0.31	□□□□□ -2.36
VHR1	YIL056W	YDR034W-B	Q6Q5X2	51 aa		0.24	□□□□□ -2.37
VHR1	YIL056W	YIL046W-A	Q3E7Z4	54 aa		0.08	□□□□□ -2.4
VHR1	YIL056W	Q0297	Q9ZZV8	51 aa		-0.08	□□□□□ -2.42

Retrieved 63 of 5,963 RNA–protein pairs in 59.5 ms