RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeastyeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKA1YIL035C YOR072W-BQ3E832 53 aa0.09□□□□□ -2.4
CKA1YIL035C NUP188P52593 1655 aaKnown RBP0.08□□□□□ -2.4
CKA1YIL035C TOR1P35169 2470 aa0.08□□□□□ -2.4
CKA1YIL035C YPR010C-AA5Z2X5 72 aa0.07□□□□□ -2.4
CKA1YIL035C SPT6P23615 1451 aaKnown RBP0.07□□□□□ -2.4
CKA1YIL035C SSK2P53599 1579 aa0.05□□□□□ -2.4
CKA1YIL035C USO1P25386 1790 aa0.04□□□□□ -2.4
CKA1YIL035C MON2P48563 1636 aaPredicted RBP0.03□□□□□ -2.4
CKA1YIL035C BUD3P25558 1636 aa0□□□□□ -2.41
CKA1YIL035C YHR050W-AQ05451 56 aa0□□□□□ -2.41
CKA1YIL035C NUP192P47054 1683 aa-0.01□□□□□ -2.41
CKA1YIL035C YOR316C-AQ3E806 69 aa-0.03□□□□□ -2.41
CKA1YIL035C ULS1Q08562 1619 aa-0.04□□□□□ -2.42
CKA1YIL035C STU1P38198 1513 aa-0.06□□□□□ -2.42
CKA1YIL035C FIG2P25653 1609 aa-0.06□□□□□ -2.42
CKA1YIL035C COX9P07255 59 aa-0.08□□□□□ -2.42
CKA1YIL035C HIR3P47171 1648 aa-0.09□□□□□ -2.42
CKA1YIL035C GCN2P15442 1659 aa-0.09□□□□□ -2.42
CKA1YIL035C YDR034C-AP0C289 58 aa-0.1□□□□□ -2.43
CKA1YIL035C NUP170P38181 1502 aa-0.1□□□□□ -2.43
CKA1YIL035C RKR1Q04781 1562 aa-0.11□□□□□ -2.43
CKA1YIL035C DDR2P89113 61 aa-0.12□□□□□ -2.43
CKA1YIL035C ATG2P53855 1592 aa-0.12□□□□□ -2.43
CKA1YIL035C PEP1P32319 1579 aa-0.13□□□□□ -2.43
CKA1YIL035C THO2P53552 1597 aaKnown RBP-0.13□□□□□ -2.43
CKA1YIL035C YJL133C-AQ3E7A3 74 aa-0.13□□□□□ -2.43
CKA1YIL035C YLR342W-AQ3E810 57 aa-0.13□□□□□ -2.43
CKA1YIL035C RPL29P05747 59 aaPredicted RBP-0.14□□□□□ -2.43
CKA1YIL035C Q0017Q9ZZX8 53 aa-0.14□□□□□ -2.43
CKA1YIL035C FLO1P32768 1537 aa-0.17□□□□□ -2.44
CKA1YIL035C YML054C-AQ3E809 52 aa-0.17□□□□□ -2.44
CKA1YIL035C FMP27Q06179 2628 aa-0.18□□□□□ -2.44
CKA1YIL035C TOR2P32600 2474 aaKnown RBP-0.19□□□□□ -2.44
CKA1YIL035C YPR117WQ06116 2489 aa-0.22□□□□□ -2.44
CKA1YIL035C YHR073W-AP0C5N7 58 aa-0.22□□□□□ -2.44
CKA1YIL035C SMX2P40204 77 aaKnown RBP-0.23□□□□□ -2.45
CKA1YIL035C MEC1P38111 2368 aa-0.23□□□□□ -2.45
CKA1YIL035C DYN1P36022 4092 aa-0.24□□□□□ -2.45
CKA1YIL035C YJL127C-BQ3E828 52 aa-0.27□□□□□ -2.45
CKA1YIL035C TEL1P38110 2787 aa-0.34□□□□□ -2.46
CKA1YIL035C CUP1-1P0CX80 61 aa-0.37□□□□□ -2.47
CKA1YIL035C CUP1-2P0CX81 61 aa-0.37□□□□□ -2.47
CKA1YIL035C PMP3P87284 55 aa-0.39□□□□□ -2.47
CKA1YIL035C TOM7P53507 60 aa-0.43□□□□□ -2.48
CKA1YIL035C YMR105W-AQ8TGS8 64 aa-0.44□□□□□ -2.48
CKA1YIL035C GCN1P33892 2672 aaKnown RBP-0.46□□□□□ -2.48
CKA1YIL035C HOR7Q05827 59 aa-0.46□□□□□ -2.48
CKA1YIL035C CSF1Q12150 2958 aa-0.46□□□□□ -2.48
CKA1YIL035C MDN1Q12019 4910 aaKnown RBP-0.47□□□□□ -2.48
CKA1YIL035C CHC1P22137 1653 aaKnown RBP-0.53□□□□□ -2.49
CKA1YIL035C TRA1P38811 3744 aa-0.55□□□□□ -2.5
CKA1YIL035C IRA1P18963 3092 aa-0.56□□□□□ -2.5
CKA1YIL035C MLP2P40457 1679 aa-0.56□□□□□ -2.5
CKA1YIL035C YLL066W-BQ8TGJ7 56 aa-0.62□□□□□ -2.51
CKA1YIL035C NUM1Q00402 2748 aa-0.63□□□□□ -2.51
CKA1YIL035C IRA2P19158 3079 aa-0.63□□□□□ -2.51
CKA1YIL035C NCE101Q02820 53 aa-0.67□□□□□ -2.52
CKA1YIL035C VPS13Q07878 3144 aa-0.75□□□□□ -2.53
CKA1YIL035C RPL39P04650 51 aa-0.99□□□□□ -2.57
CKA1YIL035C TOM1Q03280 3268 aa-1.18□□□□□ -2.6
CKA1YIL035C YIL046W-AQ3E7Z4 54 aa-1.27□□□□□ -2.61
CKA1YIL035C Q0297Q9ZZV8 51 aa-1.34□□□□□ -2.62
CKA1YIL035C YDR034W-BQ6Q5X2 51 aa-2.14□□□□□ -2.75
Retrieved 63 of 5,963 RNA–protein pairs in 7.7 ms