RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C YJL009WP47078 108 aa2.46□□□□□ -2.02
RTA1YGR213C YCL042WP25572 119 aa2.45□□□□□ -2.02
RTA1YGR213C HOR7Q05827 59 aa2.45□□□□□ -2.02
RTA1YGR213C YNL146C-AQ3E7Z1 64 aa2.45□□□□□ -2.02
RTA1YGR213C YBL044WP38194 122 aa2.44□□□□□ -2.02
RTA1YGR213C LCL1Q02786 101 aa2.43□□□□□ -2.02
RTA1YGR213C YGR146C-AQ8TGT9 53 aa2.42□□□□□ -2.02
RTA1YGR213C YMR105W-AQ8TGS8 64 aa2.41□□□□□ -2.02
RTA1YGR213C RPL39P04650 51 aa2.4□□□□□ -2.03
RTA1YGR213C RPC10P40422 70 aa2.39□□□□□ -2.03
RTA1YGR213C ACC1Q00955 2233 aaKnown RBP2.38□□□□□ -2.03
RTA1YGR213C RPL43AP0CX25 92 aaKnown RBP2.36□□□□□ -2.03
RTA1YGR213C RPL43BP0CX26 92 aa2.36□□□□□ -2.03
RTA1YGR213C YCR108CQ3E819 63 aa2.36□□□□□ -2.03
RTA1YGR213C RPL37BP51402 88 aaKnown RBP2.35□□□□□ -2.03
RTA1YGR213C POL2P21951 2222 aaKnown RBP2.35□□□□□ -2.03
RTA1YGR213C YBR072C-AQ3E794 53 aa2.33□□□□□ -2.04
RTA1YGR213C YOR316C-AQ3E806 69 aa2.33□□□□□ -2.04
RTA1YGR213C RDS3Q06835 107 aaPredicted RBP2.32□□□□□ -2.04
RTA1YGR213C URA2P07259 2214 aaKnown RBP2.31□□□□□ -2.04
RTA1YGR213C HHY1P39982 102 aa2.29□□□□□ -2.04
RTA1YGR213C YHR073W-AP0C5N7 58 aa2.28□□□□□ -2.04
RTA1YGR213C YBR016WP38216 128 aa2.25□□□□□ -2.05
RTA1YGR213C YIL046W-AQ3E7Z4 54 aa2.22□□□□□ -2.05
RTA1YGR213C YOR072W-BQ3E832 53 aa2.22□□□□□ -2.05
RTA1YGR213C YDR524C-BQ3E6R4 66 aa2.19□□□□□ -2.06
RTA1YGR213C YDR034C-AP0C289 58 aa2.18□□□□□ -2.06
RTA1YGR213C HFA1P32874 2273 aa2.15□□□□□ -2.06
RTA1YGR213C YHR212W-AP0CX91 67 aa2.15□□□□□ -2.07
RTA1YGR213C RPL37AP49166 88 aaKnown RBP2.15□□□□□ -2.07
RTA1YGR213C YHR086W-AQ3E746 53 aa2.12□□□□□ -2.07
RTA1YGR213C YLL066W-BQ8TGJ7 56 aa2.07□□□□□ -2.08
RTA1YGR213C YOL164W-AQ3E7A5 60 aa2.05□□□□□ -2.08
RTA1YGR213C YML054C-AQ3E809 52 aa1.96□□□□□ -2.1
RTA1YGR213C MEC1P38111 2368 aa1.93□□□□□ -2.1
RTA1YGR213C YLR157W-EP0CF00 54 aa1.9□□□□□ -2.11
RTA1YGR213C TAO3P40468 2376 aa1.88□□□□□ -2.11
RTA1YGR213C Q0297Q9ZZV8 51 aa1.85□□□□□ -2.11
RTA1YGR213C IRA2P19158 3079 aa1.83□□□□□ -2.12
RTA1YGR213C Q0017Q9ZZX8 53 aa1.83□□□□□ -2.12
RTA1YGR213C PRP8P33334 2413 aaKnown RBP1.81□□□□□ -2.12
RTA1YGR213C YDR034W-BQ6Q5X2 51 aa1.8□□□□□ -2.12
RTA1YGR213C TOM1Q03280 3268 aa1.77□□□□□ -2.13
RTA1YGR213C GCN1P33892 2672 aaKnown RBP1.76□□□□□ -2.13
RTA1YGR213C YHR050W-AQ05451 56 aa1.75□□□□□ -2.13
RTA1YGR213C VPS13Q07878 3144 aa1.74□□□□□ -2.13
RTA1YGR213C UTP20P35194 2493 aaKnown RBP1.74□□□□□ -2.13
RTA1YGR213C CSF1Q12150 2958 aa1.7□□□□□ -2.14
RTA1YGR213C TRA1P38811 3744 aa1.68□□□□□ -2.14
RTA1YGR213C RPS29AP41057 56 aaKnown RBP1.68□□□□□ -2.14
RTA1YGR213C RPS29BP41058 56 aaKnown RBP1.67□□□□□ -2.14
RTA1YGR213C FMP27Q06179 2628 aa1.64□□□□□ -2.15
RTA1YGR213C YBR056W-AI2HB52 66 aa1.62□□□□□ -2.15
RTA1YGR213C YPR117WQ06116 2489 aa1.59□□□□□ -2.16
RTA1YGR213C IRA1P18963 3092 aa1.58□□□□□ -2.16
RTA1YGR213C TOR2P32600 2474 aaKnown RBP1.57□□□□□ -2.16
RTA1YGR213C DYN1P36022 4092 aa1.56□□□□□ -2.16
RTA1YGR213C TOR1P35169 2470 aa1.54□□□□□ -2.16
RTA1YGR213C NUM1Q00402 2748 aa1.51□□□□□ -2.17
RTA1YGR213C TEL1P38110 2787 aa1.5□□□□□ -2.17
RTA1YGR213C CUP1-1P0CX80 61 aa1.45□□□□□ -2.18
RTA1YGR213C CUP1-2P0CX81 61 aa1.45□□□□□ -2.18
RTA1YGR213C MDN1Q12019 4910 aaKnown RBP0.99□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 30.7 ms