RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YBR072C-AQ3E794 53 aa2.08□□□□□ -2.08
PDX1YGR193C BEM2P39960 2167 aaKnown RBP2.07□□□□□ -2.08
PDX1YGR193C RPL43AP0CX25 92 aaKnown RBP2.06□□□□□ -2.08
PDX1YGR193C RPL43BP0CX26 92 aa2.06□□□□□ -2.08
PDX1YGR193C YBL044WP38194 122 aa2.06□□□□□ -2.08
PDX1YGR193C YHR212W-AP0CX91 67 aa2.05□□□□□ -2.08
PDX1YGR193C YHR086W-AQ3E746 53 aa2.05□□□□□ -2.08
PDX1YGR193C YJL127C-BQ3E828 52 aa2.05□□□□□ -2.08
PDX1YGR193C YCR108CQ3E819 63 aa2.04□□□□□ -2.08
PDX1YGR193C SEC16P48415 2195 aaKnown RBP2.03□□□□□ -2.08
PDX1YGR193C RPS27BP38711 82 aa2.03□□□□□ -2.08
PDX1YGR193C NCE101Q02820 53 aa2.02□□□□□ -2.09
PDX1YGR193C YGR146C-AQ8TGT9 53 aa2.02□□□□□ -2.09
PDX1YGR193C FAB1P34756 2278 aa2.02□□□□□ -2.09
PDX1YGR193C POL2P21951 2222 aaKnown RBP2.02□□□□□ -2.09
PDX1YGR193C RPL37BP51402 88 aaKnown RBP2.01□□□□□ -2.09
PDX1YGR193C PMP3P87284 55 aa2□□□□□ -2.09
PDX1YGR193C SEN1Q00416 2231 aaKnown RBP1.99□□□□□ -2.09
PDX1YGR193C YBR016WP38216 128 aa1.97□□□□□ -2.09
PDX1YGR193C YOR316C-AQ3E806 69 aa1.94□□□□□ -2.1
PDX1YGR193C HOR7Q05827 59 aa1.91□□□□□ -2.1
PDX1YGR193C URA2P07259 2214 aaKnown RBP1.9□□□□□ -2.11
PDX1YGR193C HFA1P32874 2273 aa1.87□□□□□ -2.11
PDX1YGR193C YHR073W-AP0C5N7 58 aa1.85□□□□□ -2.11
PDX1YGR193C YOL164W-AQ3E7A5 60 aa1.85□□□□□ -2.11
PDX1YGR193C YOR072W-BQ3E832 53 aa1.84□□□□□ -2.11
PDX1YGR193C RPL37AP49166 88 aaKnown RBP1.81□□□□□ -2.12
PDX1YGR193C YDR524C-BQ3E6R4 66 aa1.8□□□□□ -2.12
PDX1YGR193C YMR105W-AQ8TGS8 64 aa1.8□□□□□ -2.12
PDX1YGR193C YDR034C-AP0C289 58 aa1.77□□□□□ -2.13
PDX1YGR193C YLR157W-EP0CF00 54 aa1.76□□□□□ -2.13
PDX1YGR193C RPL39P04650 51 aa1.74□□□□□ -2.13
PDX1YGR193C YIL046W-AQ3E7Z4 54 aa1.56□□□□□ -2.16
PDX1YGR193C YLL066W-BQ8TGJ7 56 aa1.56□□□□□ -2.16
PDX1YGR193C YML054C-AQ3E809 52 aa1.54□□□□□ -2.16
PDX1YGR193C TAO3P40468 2376 aa1.54□□□□□ -2.16
PDX1YGR193C RPS29BP41058 56 aaKnown RBP1.51□□□□□ -2.17
PDX1YGR193C RPS29AP41057 56 aaKnown RBP1.45□□□□□ -2.18
PDX1YGR193C Q0017Q9ZZX8 53 aa1.45□□□□□ -2.18
PDX1YGR193C MEC1P38111 2368 aa1.44□□□□□ -2.18
PDX1YGR193C YHR050W-AQ05451 56 aa1.41□□□□□ -2.18
PDX1YGR193C PRP8P33334 2413 aaKnown RBP1.3□□□□□ -2.2
PDX1YGR193C TOM1Q03280 3268 aa1.21□□□□□ -2.21
PDX1YGR193C Q0297Q9ZZV8 51 aa1.17□□□□□ -2.22
PDX1YGR193C TOR1P35169 2470 aa1.15□□□□□ -2.23
PDX1YGR193C VPS13Q07878 3144 aa1.13□□□□□ -2.23
PDX1YGR193C CUP1-1P0CX80 61 aa1.13□□□□□ -2.23
PDX1YGR193C CUP1-2P0CX81 61 aa1.13□□□□□ -2.23
PDX1YGR193C YDR034W-BQ6Q5X2 51 aa1.13□□□□□ -2.23
PDX1YGR193C IRA2P19158 3079 aa1.12□□□□□ -2.23
PDX1YGR193C TRA1P38811 3744 aa1.11□□□□□ -2.23
PDX1YGR193C CSF1Q12150 2958 aa1.1□□□□□ -2.23
PDX1YGR193C NUM1Q00402 2748 aa1.1□□□□□ -2.23
PDX1YGR193C YPR117WQ06116 2489 aa1.09□□□□□ -2.23
PDX1YGR193C FMP27Q06179 2628 aa1.07□□□□□ -2.24
PDX1YGR193C GCN1P33892 2672 aaKnown RBP1.06□□□□□ -2.24
PDX1YGR193C UTP20P35194 2493 aaKnown RBP1.03□□□□□ -2.24
PDX1YGR193C TOR2P32600 2474 aaKnown RBP1.02□□□□□ -2.25
PDX1YGR193C IRA1P18963 3092 aa0.99□□□□□ -2.25
PDX1YGR193C DYN1P36022 4092 aa0.96□□□□□ -2.26
PDX1YGR193C YBR056W-AI2HB52 66 aa0.95□□□□□ -2.26
PDX1YGR193C TEL1P38110 2787 aa0.95□□□□□ -2.26
PDX1YGR193C MDN1Q12019 4910 aaKnown RBP0.86□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 43.6 ms