RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeastyeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP43YGL120C RPL43AP0CX25 92 aaKnown RBP3.05□□□□□ -1.92
PRP43YGL120C RPL43BP0CX26 92 aa3.05□□□□□ -1.92
PRP43YGL120C YJL144WP47009 104 aa3.03□□□□□ -1.92
PRP43YGL120C YHR007C-AQ07074 71 aa3.03□□□□□ -1.92
PRP43YGL120C TAR1Q8TGM6 124 aa3.03□□□□□ -1.92
PRP43YGL120C IRA2P19158 3079 aa3.03□□□□□ -1.92
PRP43YGL120C HOR7Q05827 59 aa3.01□□□□□ -1.93
PRP43YGL120C YGR146C-AQ8TGT9 53 aa3□□□□□ -1.93
PRP43YGL120C OLI1P61829 76 aa2.99□□□□□ -1.93
PRP43YGL120C LCL1Q02786 101 aa2.99□□□□□ -1.93
PRP43YGL120C YIL046W-AQ3E7Z4 54 aa2.99□□□□□ -1.93
PRP43YGL120C RPC10P40422 70 aa2.98□□□□□ -1.93
PRP43YGL120C TOM1Q03280 3268 aa2.98□□□□□ -1.93
PRP43YGL120C YBL044WP38194 122 aa2.97□□□□□ -1.93
PRP43YGL120C YCR108CQ3E819 63 aa2.97□□□□□ -1.93
PRP43YGL120C HFA1P32874 2273 aa2.95□□□□□ -1.94
PRP43YGL120C GIS2P53849 153 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
PRP43YGL120C VPS13Q07878 3144 aa2.95□□□□□ -1.94
PRP43YGL120C RPL37BP51402 88 aaKnown RBP2.92□□□□□ -1.94
PRP43YGL120C YMR230W-AQ3E7B5 62 aa2.91□□□□□ -1.94
PRP43YGL120C RDS3Q06835 107 aaPredicted RBP2.9□□□□□ -1.95
PRP43YGL120C YJL009WP47078 108 aa2.89□□□□□ -1.95
PRP43YGL120C YDR524C-BQ3E6R4 66 aa2.88□□□□□ -1.95
PRP43YGL120C YOR316C-AQ3E806 69 aa2.86□□□□□ -1.95
PRP43YGL120C YBR016WP38216 128 aa2.82□□□□□ -1.96
PRP43YGL120C YHR073W-AP0C5N7 58 aa2.81□□□□□ -1.96
PRP43YGL120C MEC1P38111 2368 aa2.78□□□□□ -1.96
PRP43YGL120C YBR072C-AQ3E794 53 aa2.77□□□□□ -1.97
PRP43YGL120C HHY1P39982 102 aa2.74□□□□□ -1.97
PRP43YGL120C TAO3P40468 2376 aa2.73□□□□□ -1.97
PRP43YGL120C PRP8P33334 2413 aaKnown RBP2.73□□□□□ -1.97
PRP43YGL120C GCN1P33892 2672 aaKnown RBP2.72□□□□□ -1.97
PRP43YGL120C IRA1P18963 3092 aa2.7□□□□□ -1.98
PRP43YGL120C YLL066W-BQ8TGJ7 56 aa2.69□□□□□ -1.98
PRP43YGL120C CSF1Q12150 2958 aa2.67□□□□□ -1.98
PRP43YGL120C YDR034C-AP0C289 58 aa2.66□□□□□ -1.98
PRP43YGL120C TRA1P38811 3744 aa2.66□□□□□ -1.98
PRP43YGL120C RPL37AP49166 88 aaKnown RBP2.65□□□□□ -1.98
PRP43YGL120C YOR072W-BQ3E832 53 aa2.65□□□□□ -1.99
PRP43YGL120C YHR212W-AP0CX91 67 aa2.64□□□□□ -1.99
PRP43YGL120C YPR117WQ06116 2489 aa2.57□□□□□ -2
PRP43YGL120C UTP20P35194 2493 aaKnown RBP2.57□□□□□ -2
PRP43YGL120C YHR086W-AQ3E746 53 aa2.51□□□□□ -2.01
PRP43YGL120C CUP1-1P0CX80 61 aa2.51□□□□□ -2.01
PRP43YGL120C CUP1-2P0CX81 61 aa2.51□□□□□ -2.01
PRP43YGL120C TOR1P35169 2470 aa2.49□□□□□ -2.01
PRP43YGL120C YGL260WP53056 76 aa2.48□□□□□ -2.01
PRP43YGL120C YOL164W-AQ3E7A5 60 aa2.47□□□□□ -2.01
PRP43YGL120C NUM1Q00402 2748 aa2.45□□□□□ -2.02
PRP43YGL120C YDR034W-BQ6Q5X2 51 aa2.43□□□□□ -2.02
PRP43YGL120C Q0297Q9ZZV8 51 aa2.37□□□□□ -2.03
PRP43YGL120C FMP27Q06179 2628 aa2.34□□□□□ -2.03
PRP43YGL120C TOR2P32600 2474 aaKnown RBP2.33□□□□□ -2.04
PRP43YGL120C YML054C-AQ3E809 52 aa2.3□□□□□ -2.04
PRP43YGL120C TEL1P38110 2787 aa2.29□□□□□ -2.04
PRP43YGL120C YLR157W-EP0CF00 54 aa2.25□□□□□ -2.05
PRP43YGL120C YBR056W-AI2HB52 66 aa2.2□□□□□ -2.06
PRP43YGL120C Q0017Q9ZZX8 53 aa2.17□□□□□ -2.06
PRP43YGL120C DYN1P36022 4092 aa2.12□□□□□ -2.07
PRP43YGL120C YHR050W-AQ05451 56 aa2.03□□□□□ -2.08
PRP43YGL120C RPS29AP41057 56 aaKnown RBP1.97□□□□□ -2.09
PRP43YGL120C RPS29BP41058 56 aaKnown RBP1.9□□□□□ -2.1
PRP43YGL120C MDN1Q12019 4910 aaKnown RBP1.67□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 15.4 ms