RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W RPS27BP38711 82 aa2.01□□□□□ -2.09
UBP6YFR010W SIP18P50263 79 aa2□□□□□ -2.09
UBP6YFR010W COX9P07255 59 aa1.99□□□□□ -2.09
UBP6YFR010W YBL044WP38194 122 aa1.97□□□□□ -2.09
UBP6YFR010W YLR342W-AQ3E810 57 aa1.97□□□□□ -2.09
UBP6YFR010W YCR108CQ3E819 63 aa1.97□□□□□ -2.09
UBP6YFR010W YOL164W-AQ3E7A5 60 aa1.96□□□□□ -2.1
UBP6YFR010W YOR008C-AQ3E7B9 74 aa1.96□□□□□ -2.1
UBP6YFR010W YPR117WQ06116 2489 aa1.95□□□□□ -2.1
UBP6YFR010W SEN1Q00416 2231 aaKnown RBP1.95□□□□□ -2.1
UBP6YFR010W YBR016WP38216 128 aa1.94□□□□□ -2.1
UBP6YFR010W TOM7P53507 60 aa1.93□□□□□ -2.1
UBP6YFR010W YLR157W-EP0CF00 54 aa1.92□□□□□ -2.1
UBP6YFR010W YJL133C-AQ3E7A3 74 aa1.92□□□□□ -2.1
UBP6YFR010W YGR146C-AQ8TGT9 53 aa1.92□□□□□ -2.1
UBP6YFR010W YLR307C-AQ3E825 87 aa1.91□□□□□ -2.1
UBP6YFR010W YLL006W-AQ3E814 58 aa1.86□□□□□ -2.11
UBP6YFR010W RPL37BP51402 88 aaKnown RBP1.85□□□□□ -2.11
UBP6YFR010W DDR2P89113 61 aa1.84□□□□□ -2.11
UBP6YFR010W RPL37AP49166 88 aaKnown RBP1.83□□□□□ -2.12
UBP6YFR010W TOR1P35169 2470 aa1.8□□□□□ -2.12
UBP6YFR010W RPL29P05747 59 aaPredicted RBP1.75□□□□□ -2.13
UBP6YFR010W CUP1-1P0CX80 61 aa1.74□□□□□ -2.13
UBP6YFR010W CUP1-2P0CX81 61 aa1.74□□□□□ -2.13
UBP6YFR010W YJL127C-BQ3E828 52 aa1.74□□□□□ -2.13
UBP6YFR010W YOR316C-AQ3E806 69 aa1.73□□□□□ -2.13
UBP6YFR010W FLO1P32768 1537 aa1.73□□□□□ -2.13
UBP6YFR010W YGL258W-AQ3E740 77 aa1.72□□□□□ -2.13
UBP6YFR010W YOR072W-BQ3E832 53 aa1.69□□□□□ -2.14
UBP6YFR010W YDR524C-BQ3E6R4 66 aa1.66□□□□□ -2.14
UBP6YFR010W TAO3P40468 2376 aa1.64□□□□□ -2.15
UBP6YFR010W TOM1Q03280 3268 aa1.63□□□□□ -2.15
UBP6YFR010W RPS29BP41058 56 aaKnown RBP1.59□□□□□ -2.16
UBP6YFR010W PRP8P33334 2413 aaKnown RBP1.56□□□□□ -2.16
UBP6YFR010W YHR073W-AP0C5N7 58 aa1.56□□□□□ -2.16
UBP6YFR010W GCN1P33892 2672 aaKnown RBP1.56□□□□□ -2.16
UBP6YFR010W YDR034C-AP0C289 58 aa1.56□□□□□ -2.16
UBP6YFR010W PMP3P87284 55 aa1.55□□□□□ -2.16
UBP6YFR010W NCE101Q02820 53 aa1.51□□□□□ -2.17
UBP6YFR010W FMP27Q06179 2628 aa1.5□□□□□ -2.17
UBP6YFR010W HOR7Q05827 59 aa1.5□□□□□ -2.17
UBP6YFR010W UTP20P35194 2493 aaKnown RBP1.48□□□□□ -2.17
UBP6YFR010W MDN1Q12019 4910 aaKnown RBP1.42□□□□□ -2.18
UBP6YFR010W TEL1P38110 2787 aa1.41□□□□□ -2.18
UBP6YFR010W VPS13Q07878 3144 aa1.39□□□□□ -2.19
UBP6YFR010W RPS29AP41057 56 aaKnown RBP1.38□□□□□ -2.19
UBP6YFR010W IRA2P19158 3079 aa1.33□□□□□ -2.2
UBP6YFR010W MEC1P38111 2368 aa1.3□□□□□ -2.2
UBP6YFR010W TOR2P32600 2474 aaKnown RBP1.3□□□□□ -2.2
UBP6YFR010W YHR050W-AQ05451 56 aa1.25□□□□□ -2.21
UBP6YFR010W YML054C-AQ3E809 52 aa1.25□□□□□ -2.21
UBP6YFR010W IRA1P18963 3092 aa1.21□□□□□ -2.22
UBP6YFR010W YMR105W-AQ8TGS8 64 aa1.21□□□□□ -2.22
UBP6YFR010W Q0017Q9ZZX8 53 aa1.2□□□□□ -2.22
UBP6YFR010W RPL39P04650 51 aa1.14□□□□□ -2.23
UBP6YFR010W YLL066W-BQ8TGJ7 56 aa1.09□□□□□ -2.24
UBP6YFR010W YDR034W-BQ6Q5X2 51 aa1.05□□□□□ -2.24
UBP6YFR010W DYN1P36022 4092 aa1.03□□□□□ -2.24
UBP6YFR010W CSF1Q12150 2958 aa0.98□□□□□ -2.25
UBP6YFR010W TRA1P38811 3744 aa0.98□□□□□ -2.25
UBP6YFR010W YBR056W-AI2HB52 66 aa0.86□□□□□ -2.27
UBP6YFR010W YIL046W-AQ3E7Z4 54 aa0.85□□□□□ -2.27
UBP6YFR010W Q0297Q9ZZV8 51 aa0.42□□□□□ -2.34
Retrieved 63 of 5,963 RNA–protein pairs in 58.9 ms