RNA–Protein interactions for RNA: YDR515W

SLF1, Transcript of RNA binding protein that associates with polysomes, yeastyeast

Gene SLF1, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLF1YDR515W YLL006W-AQ3E814 58 aa0.19□□□□□ -2.38
SLF1YDR515W YOR093CQ12275 1648 aa0.18□□□□□ -2.38
SLF1YDR515W COA2Q3E823 68 aa0.16□□□□□ -2.38
SLF1YDR515W NUP188P52593 1655 aaKnown RBP0.16□□□□□ -2.38
SLF1YDR515W YGL258W-AQ3E740 77 aa0.13□□□□□ -2.39
SLF1YDR515W YOR072W-BQ3E832 53 aa0.13□□□□□ -2.39
SLF1YDR515W PEP1P32319 1579 aa0.11□□□□□ -2.39
SLF1YDR515W BUD3P25558 1636 aa0.08□□□□□ -2.4
SLF1YDR515W ULS1Q08562 1619 aa0.08□□□□□ -2.4
SLF1YDR515W TOR1P35169 2470 aa0.07□□□□□ -2.4
SLF1YDR515W NUP192P47054 1683 aa0.06□□□□□ -2.4
SLF1YDR515W STU1P38198 1513 aa0.06□□□□□ -2.4
SLF1YDR515W NUP170P38181 1502 aa0.04□□□□□ -2.4
SLF1YDR515W RKR1Q04781 1562 aa0.02□□□□□ -2.41
SLF1YDR515W YOR316C-AQ3E806 69 aa0□□□□□ -2.41
SLF1YDR515W USO1P25386 1790 aa-0.01□□□□□ -2.41
SLF1YDR515W FIG2P25653 1609 aa-0.02□□□□□ -2.41
SLF1YDR515W ATG2P53855 1592 aa-0.02□□□□□ -2.41
SLF1YDR515W YHR050W-AQ05451 56 aa-0.02□□□□□ -2.41
SLF1YDR515W HIR3P47171 1648 aa-0.03□□□□□ -2.41
SLF1YDR515W THO2P53552 1597 aaKnown RBP-0.04□□□□□ -2.42
SLF1YDR515W FLO1P32768 1537 aa-0.09□□□□□ -2.42
SLF1YDR515W YJL133C-AQ3E7A3 74 aa-0.1□□□□□ -2.42
SLF1YDR515W YLR342W-AQ3E810 57 aa-0.11□□□□□ -2.43
SLF1YDR515W TOR2P32600 2474 aaKnown RBP-0.11□□□□□ -2.43
SLF1YDR515W YDR034C-AP0C289 58 aa-0.12□□□□□ -2.43
SLF1YDR515W DDR2P89113 61 aa-0.12□□□□□ -2.43
SLF1YDR515W COX9P07255 59 aa-0.13□□□□□ -2.43
SLF1YDR515W FMP27Q06179 2628 aa-0.14□□□□□ -2.43
SLF1YDR515W GCN2P15442 1659 aa-0.16□□□□□ -2.44
SLF1YDR515W RPL29P05747 59 aaPredicted RBP-0.16□□□□□ -2.44
SLF1YDR515W DYN1P36022 4092 aa-0.17□□□□□ -2.44
SLF1YDR515W MEC1P38111 2368 aa-0.21□□□□□ -2.44
SLF1YDR515W YPR117WQ06116 2489 aa-0.23□□□□□ -2.45
SLF1YDR515W Q0017Q9ZZX8 53 aa-0.23□□□□□ -2.45
SLF1YDR515W YHR073W-AP0C5N7 58 aa-0.26□□□□□ -2.45
SLF1YDR515W YML054C-AQ3E809 52 aa-0.3□□□□□ -2.46
SLF1YDR515W SMX2P40204 77 aaKnown RBP-0.31□□□□□ -2.46
SLF1YDR515W YJL127C-BQ3E828 52 aa-0.33□□□□□ -2.46
SLF1YDR515W TEL1P38110 2787 aa-0.35□□□□□ -2.47
SLF1YDR515W MLP2P40457 1679 aa-0.44□□□□□ -2.48
SLF1YDR515W GCN1P33892 2672 aaKnown RBP-0.44□□□□□ -2.48
SLF1YDR515W MDN1Q12019 4910 aaKnown RBP-0.46□□□□□ -2.48
SLF1YDR515W TOM7P53507 60 aa-0.48□□□□□ -2.49
SLF1YDR515W TRA1P38811 3744 aa-0.49□□□□□ -2.49
SLF1YDR515W CSF1Q12150 2958 aa-0.52□□□□□ -2.49
SLF1YDR515W CHC1P22137 1653 aaKnown RBP-0.53□□□□□ -2.49
SLF1YDR515W CUP1-1P0CX80 61 aa-0.53□□□□□ -2.49
SLF1YDR515W CUP1-2P0CX81 61 aa-0.53□□□□□ -2.49
SLF1YDR515W PMP3P87284 55 aa-0.55□□□□□ -2.5
SLF1YDR515W IRA1P18963 3092 aa-0.58□□□□□ -2.5
SLF1YDR515W HOR7Q05827 59 aa-0.6□□□□□ -2.5
SLF1YDR515W NUM1Q00402 2748 aa-0.63□□□□□ -2.51
SLF1YDR515W YMR105W-AQ8TGS8 64 aa-0.68□□□□□ -2.52
SLF1YDR515W IRA2P19158 3079 aa-0.76□□□□□ -2.53
SLF1YDR515W VPS13Q07878 3144 aa-0.84□□□□□ -2.54
SLF1YDR515W YLL066W-BQ8TGJ7 56 aa-0.85□□□□□ -2.54
SLF1YDR515W NCE101Q02820 53 aa-0.88□□□□□ -2.55
SLF1YDR515W TOM1Q03280 3268 aa-1.11□□□□□ -2.59
SLF1YDR515W RPL39P04650 51 aa-1.31□□□□□ -2.62
SLF1YDR515W Q0297Q9ZZV8 51 aa-1.39□□□□□ -2.63
SLF1YDR515W YIL046W-AQ3E7Z4 54 aa-1.51□□□□□ -2.65
SLF1YDR515W YDR034W-BQ6Q5X2 51 aa-1.61□□□□□ -2.67
Retrieved 63 of 5,963 RNA–protein pairs in 46.7 ms