RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W TY1B-DR4Q07793 1604 aa-0.5□□□□□ -2.49
VPS52YDR484W MDN1Q12019 4910 aaKnown RBP-0.5□□□□□ -2.49
VPS52YDR484W FIG2P25653 1609 aa-0.51□□□□□ -2.49
VPS52YDR484W CSF1Q12150 2958 aa-0.51□□□□□ -2.49
VPS52YDR484W YOR093CQ12275 1648 aa-0.52□□□□□ -2.49
VPS52YDR484W GCN1P33892 2672 aaKnown RBP-0.52□□□□□ -2.49
VPS52YDR484W BCK1Q01389 1478 aa-0.52□□□□□ -2.49
VPS52YDR484W YBT1P32386 1661 aa-0.53□□□□□ -2.49
VPS52YDR484W YPR010C-AA5Z2X5 72 aa-0.56□□□□□ -2.5
VPS52YDR484W YFR010W-AP0C5N0 62 aa-0.57□□□□□ -2.5
VPS52YDR484W THO2P53552 1597 aaKnown RBP-0.57□□□□□ -2.5
VPS52YDR484W VMA9Q3E7B6 73 aa-0.59□□□□□ -2.5
VPS52YDR484W YCF1P39109 1515 aaKnown RBP-0.59□□□□□ -2.5
VPS52YDR484W IRA1P18963 3092 aa-0.61□□□□□ -2.51
VPS52YDR484W CDC25P04821 1589 aa-0.61□□□□□ -2.51
VPS52YDR484W PDR5P33302 1511 aaKnown RBP-0.63□□□□□ -2.51
VPS52YDR484W YDR034C-AP0C289 58 aa-0.64□□□□□ -2.51
VPS52YDR484W FLO1P32768 1537 aa-0.64□□□□□ -2.51
VPS52YDR484W Q0017Q9ZZX8 53 aa-0.64□□□□□ -2.51
VPS52YDR484W GCN2P15442 1659 aa-0.65□□□□□ -2.51
VPS52YDR484W YOR316C-AQ3E806 69 aa-0.65□□□□□ -2.51
VPS52YDR484W NUP188P52593 1655 aaKnown RBP-0.65□□□□□ -2.51
VPS52YDR484W RPL29P05747 59 aaPredicted RBP-0.66□□□□□ -2.51
VPS52YDR484W YKL023C-AQ2V2P3 75 aa-0.66□□□□□ -2.51
VPS52YDR484W SSK2P53599 1579 aa-0.66□□□□□ -2.52
VPS52YDR484W BUD3P25558 1636 aa-0.67□□□□□ -2.52
VPS52YDR484W IRA2P19158 3079 aa-0.67□□□□□ -2.52
VPS52YDR484W USO1P25386 1790 aa-0.68□□□□□ -2.52
VPS52YDR484W HIR3P47171 1648 aa-0.7□□□□□ -2.52
VPS52YDR484W VPS13Q07878 3144 aa-0.71□□□□□ -2.52
VPS52YDR484W NUP192P47054 1683 aa-0.71□□□□□ -2.52
VPS52YDR484W SPT6P23615 1451 aaKnown RBP-0.71□□□□□ -2.52
VPS52YDR484W ATG2P53855 1592 aa-0.71□□□□□ -2.52
VPS52YDR484W YML054C-AQ3E809 52 aa-0.72□□□□□ -2.52
VPS52YDR484W STU1P38198 1513 aa-0.72□□□□□ -2.52
VPS52YDR484W YJL133C-AQ3E7A3 74 aa-0.74□□□□□ -2.53
VPS52YDR484W CUP1-1P0CX80 61 aa-0.76□□□□□ -2.53
VPS52YDR484W CUP1-2P0CX81 61 aa-0.76□□□□□ -2.53
VPS52YDR484W DDR2P89113 61 aa-0.77□□□□□ -2.53
VPS52YDR484W NUM1Q00402 2748 aa-0.77□□□□□ -2.53
VPS52YDR484W YLR342W-AQ3E810 57 aa-0.77□□□□□ -2.53
VPS52YDR484W ULS1Q08562 1619 aa-0.78□□□□□ -2.54
VPS52YDR484W NUP170P38181 1502 aa-0.79□□□□□ -2.54
VPS52YDR484W PEP1P32319 1579 aa-0.81□□□□□ -2.54
VPS52YDR484W MON2P48563 1636 aaPredicted RBP-0.82□□□□□ -2.54
VPS52YDR484W YHR073W-AP0C5N7 58 aa-0.83□□□□□ -2.54
VPS52YDR484W RKR1Q04781 1562 aa-0.83□□□□□ -2.54
VPS52YDR484W COX9P07255 59 aa-0.83□□□□□ -2.54
VPS52YDR484W YJL127C-BQ3E828 52 aa-0.87□□□□□ -2.55
VPS52YDR484W YMR105W-AQ8TGS8 64 aa-0.92□□□□□ -2.56
VPS52YDR484W SMX2P40204 77 aaKnown RBP-0.96□□□□□ -2.56
VPS52YDR484W PMP3P87284 55 aa-1.01□□□□□ -2.57
VPS52YDR484W CHC1P22137 1653 aaKnown RBP-1.02□□□□□ -2.57
VPS52YDR484W TOM7P53507 60 aa-1.05□□□□□ -2.58
VPS52YDR484W HOR7Q05827 59 aa-1.11□□□□□ -2.59
VPS52YDR484W MLP2P40457 1679 aa-1.11□□□□□ -2.59
VPS52YDR484W TOM1Q03280 3268 aa-1.13□□□□□ -2.59
VPS52YDR484W YLL066W-BQ8TGJ7 56 aa-1.14□□□□□ -2.59
VPS52YDR484W NCE101Q02820 53 aa-1.32□□□□□ -2.62
VPS52YDR484W RPL39P04650 51 aa-1.49□□□□□ -2.65
VPS52YDR484W Q0297Q9ZZV8 51 aa-1.76□□□□□ -2.69
VPS52YDR484W YIL046W-AQ3E7Z4 54 aa-1.78□□□□□ -2.69
VPS52YDR484W YDR034W-BQ6Q5X2 51 aa-2.44□□□□□ -2.8
Retrieved 63 of 5,963 RNA–protein pairs in 58.5 ms