RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeastyeast

Gene HTA1, Length 399 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTA1YDR225W YCR108CQ3E819 63 aa0.69□□□□□ -2.3
HTA1YDR225W TOM1Q03280 3268 aa0.69□□□□□ -2.3
HTA1YDR225W STU1P38198 1513 aa0.69□□□□□ -2.3
HTA1YDR225W YGR146C-AQ8TGT9 53 aa0.68□□□□□ -2.3
HTA1YDR225W TOR1P35169 2470 aa0.67□□□□□ -2.3
HTA1YDR225W TOS6P48560 102 aa0.67□□□□□ -2.3
HTA1YDR225W YOR008C-AQ3E7B9 74 aa0.66□□□□□ -2.3
HTA1YDR225W THO2P53552 1597 aaKnown RBP0.65□□□□□ -2.31
HTA1YDR225W RKR1Q04781 1562 aa0.65□□□□□ -2.31
HTA1YDR225W NUP192P47054 1683 aa0.63□□□□□ -2.31
HTA1YDR225W SMX2P40204 77 aaKnown RBP0.63□□□□□ -2.31
HTA1YDR225W NUP170P38181 1502 aa0.61□□□□□ -2.31
HTA1YDR225W USO1P25386 1790 aa0.6□□□□□ -2.31
HTA1YDR225W GCN1P33892 2672 aaKnown RBP0.6□□□□□ -2.31
HTA1YDR225W BUD3P25558 1636 aa0.59□□□□□ -2.32
HTA1YDR225W HIR3P47171 1648 aa0.57□□□□□ -2.32
HTA1YDR225W FIG2P25653 1609 aa0.56□□□□□ -2.32
HTA1YDR225W YDR524C-BQ3E6R4 66 aa0.56□□□□□ -2.32
HTA1YDR225W COA2Q3E823 68 aa0.56□□□□□ -2.32
HTA1YDR225W YLL006W-AQ3E814 58 aa0.55□□□□□ -2.32
HTA1YDR225W RPS29AP41057 56 aaKnown RBP0.54□□□□□ -2.32
HTA1YDR225W UTP20P35194 2493 aaKnown RBP0.53□□□□□ -2.32
HTA1YDR225W YLR342W-AQ3E810 57 aa0.53□□□□□ -2.32
HTA1YDR225W YOR072W-BQ3E832 53 aa0.53□□□□□ -2.32
HTA1YDR225W IRA2P19158 3079 aa0.53□□□□□ -2.33
HTA1YDR225W VPS13Q07878 3144 aa0.52□□□□□ -2.33
HTA1YDR225W COX9P07255 59 aa0.52□□□□□ -2.33
HTA1YDR225W ATG2P53855 1592 aa0.52□□□□□ -2.33
HTA1YDR225W CUP1-1P0CX80 61 aa0.51□□□□□ -2.33
HTA1YDR225W CUP1-2P0CX81 61 aa0.51□□□□□ -2.33
HTA1YDR225W YGL258W-AQ3E740 77 aa0.51□□□□□ -2.33
HTA1YDR225W YJL133C-AQ3E7A3 74 aa0.51□□□□□ -2.33
HTA1YDR225W YOR316C-AQ3E806 69 aa0.51□□□□□ -2.33
HTA1YDR225W TEL1P38110 2787 aa0.5□□□□□ -2.33
HTA1YDR225W DDR2P89113 61 aa0.49□□□□□ -2.33
HTA1YDR225W MLP2P40457 1679 aa0.49□□□□□ -2.33
HTA1YDR225W CHC1P22137 1653 aaKnown RBP0.47□□□□□ -2.33
HTA1YDR225W DYN1P36022 4092 aa0.47□□□□□ -2.33
HTA1YDR225W TOR2P32600 2474 aaKnown RBP0.43□□□□□ -2.34
HTA1YDR225W GCN2P15442 1659 aa0.42□□□□□ -2.34
HTA1YDR225W IRA1P18963 3092 aa0.41□□□□□ -2.34
HTA1YDR225W YBR056W-AI2HB52 66 aa0.4□□□□□ -2.35
HTA1YDR225W RPL29P05747 59 aaPredicted RBP0.4□□□□□ -2.35
HTA1YDR225W YDR034C-AP0C289 58 aa0.4□□□□□ -2.35
HTA1YDR225W FLO1P32768 1537 aa0.39□□□□□ -2.35
HTA1YDR225W YHR073W-AP0C5N7 58 aa0.37□□□□□ -2.35
HTA1YDR225W TOM7P53507 60 aa0.37□□□□□ -2.35
HTA1YDR225W YJL127C-BQ3E828 52 aa0.37□□□□□ -2.35
HTA1YDR225W YHR050W-AQ05451 56 aa0.35□□□□□ -2.35
HTA1YDR225W MEC1P38111 2368 aa0.3□□□□□ -2.36
HTA1YDR225W TRA1P38811 3744 aa0.29□□□□□ -2.36
HTA1YDR225W Q0017Q9ZZX8 53 aa0.28□□□□□ -2.36
HTA1YDR225W YML054C-AQ3E809 52 aa0.26□□□□□ -2.37
HTA1YDR225W PMP3P87284 55 aa0.23□□□□□ -2.37
HTA1YDR225W HOR7Q05827 59 aa0.23□□□□□ -2.37
HTA1YDR225W CSF1Q12150 2958 aa0.22□□□□□ -2.37
HTA1YDR225W NCE101Q02820 53 aa0.14□□□□□ -2.39
HTA1YDR225W YMR105W-AQ8TGS8 64 aa0.03□□□□□ -2.4
HTA1YDR225W YLL066W-BQ8TGJ7 56 aa0.01□□□□□ -2.41
HTA1YDR225W YIL046W-AQ3E7Z4 54 aa-0.04□□□□□ -2.42
HTA1YDR225W YDR034W-BQ6Q5X2 51 aa-0.05□□□□□ -2.42
HTA1YDR225W Q0297Q9ZZV8 51 aa-0.06□□□□□ -2.42
HTA1YDR225W RPL39P04650 51 aa-0.11□□□□□ -2.43
Retrieved 63 of 5,963 RNA–protein pairs in 63.5 ms