RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF11, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF11YDR073W NUP192P47054 1683 aa0.92□□□□□ -2.26
SNF11YDR073W COA2Q3E823 68 aa0.91□□□□□ -2.26
SNF11YDR073W YDR524C-BQ3E6R4 66 aa0.9□□□□□ -2.27
SNF11YDR073W PEP1P32319 1579 aa0.9□□□□□ -2.27
SNF11YDR073W BUD3P25558 1636 aa0.89□□□□□ -2.27
SNF11YDR073W YPR010C-AA5Z2X5 72 aa0.88□□□□□ -2.27
SNF11YDR073W UTP20P35194 2493 aaKnown RBP0.82□□□□□ -2.28
SNF11YDR073W YLL006W-AQ3E814 58 aa0.82□□□□□ -2.28
SNF11YDR073W RKR1Q04781 1562 aa0.79□□□□□ -2.28
SNF11YDR073W YGL258W-AQ3E740 77 aa0.76□□□□□ -2.29
SNF11YDR073W STU1P38198 1513 aa0.75□□□□□ -2.29
SNF11YDR073W YOR072W-BQ3E832 53 aa0.75□□□□□ -2.29
SNF11YDR073W HIR3P47171 1648 aa0.71□□□□□ -2.3
SNF11YDR073W THO2P53552 1597 aaKnown RBP0.7□□□□□ -2.3
SNF11YDR073W NUP170P38181 1502 aa0.67□□□□□ -2.3
SNF11YDR073W TOR1P35169 2470 aa0.64□□□□□ -2.31
SNF11YDR073W ATG2P53855 1592 aa0.58□□□□□ -2.32
SNF11YDR073W GCN2P15442 1659 aa0.52□□□□□ -2.33
SNF11YDR073W FIG2P25653 1609 aa0.51□□□□□ -2.33
SNF11YDR073W YOR316C-AQ3E806 69 aa0.48□□□□□ -2.33
SNF11YDR073W YHR050W-AQ05451 56 aa0.39□□□□□ -2.35
SNF11YDR073W COX9P07255 59 aa0.37□□□□□ -2.35
SNF11YDR073W FLO1P32768 1537 aa0.33□□□□□ -2.36
SNF11YDR073W YJL133C-AQ3E7A3 74 aa0.31□□□□□ -2.36
SNF11YDR073W YLR342W-AQ3E810 57 aa0.31□□□□□ -2.36
SNF11YDR073W DDR2P89113 61 aa0.3□□□□□ -2.36
SNF11YDR073W YDR034C-AP0C289 58 aa0.24□□□□□ -2.37
SNF11YDR073W FMP27Q06179 2628 aa0.15□□□□□ -2.39
SNF11YDR073W TOR2P32600 2474 aaKnown RBP0.13□□□□□ -2.39
SNF11YDR073W RPL29P05747 59 aaPredicted RBP0.12□□□□□ -2.39
SNF11YDR073W MLP2P40457 1679 aa0.05□□□□□ -2.4
SNF11YDR073W YPR117WQ06116 2489 aa0□□□□□ -2.41
SNF11YDR073W Q0017Q9ZZX8 53 aa0□□□□□ -2.41
SNF11YDR073W SMX2P40204 77 aaKnown RBP-0.02□□□□□ -2.41
SNF11YDR073W MEC1P38111 2368 aa-0.02□□□□□ -2.41
SNF11YDR073W YHR073W-AP0C5N7 58 aa-0.03□□□□□ -2.41
SNF11YDR073W YML054C-AQ3E809 52 aa-0.08□□□□□ -2.42
SNF11YDR073W CHC1P22137 1653 aaKnown RBP-0.09□□□□□ -2.42
SNF11YDR073W YJL127C-BQ3E828 52 aa-0.1□□□□□ -2.43
SNF11YDR073W DYN1P36022 4092 aa-0.12□□□□□ -2.43
SNF11YDR073W TEL1P38110 2787 aa-0.26□□□□□ -2.45
SNF11YDR073W GCN1P33892 2672 aaKnown RBP-0.35□□□□□ -2.47
SNF11YDR073W TOM7P53507 60 aa-0.44□□□□□ -2.48
SNF11YDR073W PMP3P87284 55 aa-0.47□□□□□ -2.48
SNF11YDR073W CSF1Q12150 2958 aa-0.53□□□□□ -2.49
SNF11YDR073W MDN1Q12019 4910 aaKnown RBP-0.58□□□□□ -2.5
SNF11YDR073W CUP1-1P0CX80 61 aa-0.59□□□□□ -2.5
SNF11YDR073W CUP1-2P0CX81 61 aa-0.59□□□□□ -2.5
SNF11YDR073W HOR7Q05827 59 aa-0.61□□□□□ -2.51
SNF11YDR073W YBR056W-AI2HB52 66 aa-0.62□□□□□ -2.51
SNF11YDR073W TRA1P38811 3744 aa-0.64□□□□□ -2.51
SNF11YDR073W YMR105W-AQ8TGS8 64 aa-0.64□□□□□ -2.51
SNF11YDR073W IRA1P18963 3092 aa-0.69□□□□□ -2.52
SNF11YDR073W NUM1Q00402 2748 aa-0.74□□□□□ -2.53
SNF11YDR073W IRA2P19158 3079 aa-0.85□□□□□ -2.54
SNF11YDR073W VPS13Q07878 3144 aa-0.91□□□□□ -2.55
SNF11YDR073W YLL066W-BQ8TGJ7 56 aa-1□□□□□ -2.57
SNF11YDR073W NCE101Q02820 53 aa-1.14□□□□□ -2.59
SNF11YDR073W TOM1Q03280 3268 aa-1.55□□□□□ -2.66
SNF11YDR073W RPL39P04650 51 aa-1.6□□□□□ -2.67
SNF11YDR073W YIL046W-AQ3E7Z4 54 aa-1.95□□□□□ -2.72
SNF11YDR073W Q0297Q9ZZV8 51 aa-1.96□□□□□ -2.72
SNF11YDR073W YDR034W-BQ6Q5X2 51 aa-3.06□□□□□ -2.9
Retrieved 63 of 5,963 RNA–protein pairs in 7.7 ms