RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C YPR010C-AA5Z2X5 72 aa1.21□□□□□ -2.22
YPK3YBR028C RPS27BP38711 82 aa1.21□□□□□ -2.22
YPK3YBR028C CHC1P22137 1653 aaKnown RBP1.21□□□□□ -2.22
YPK3YBR028C SIP18P50263 79 aa1.19□□□□□ -2.22
YPK3YBR028C PRP8P33334 2413 aaKnown RBP1.17□□□□□ -2.22
YPK3YBR028C RPS29BP41058 56 aaKnown RBP1.17□□□□□ -2.22
YPK3YBR028C YCR108CQ3E819 63 aa1.15□□□□□ -2.23
YPK3YBR028C YGR146C-AQ8TGT9 53 aa1.15□□□□□ -2.23
YPK3YBR028C ATG2P53855 1592 aa1.15□□□□□ -2.23
YPK3YBR028C FIG2P25653 1609 aa1.14□□□□□ -2.23
YPK3YBR028C YOR008C-AQ3E7B9 74 aa1.14□□□□□ -2.23
YPK3YBR028C TOS6P48560 102 aa1.13□□□□□ -2.23
YPK3YBR028C GCN2P15442 1659 aa1.07□□□□□ -2.24
YPK3YBR028C TAO3P40468 2376 aa1.03□□□□□ -2.24
YPK3YBR028C COA2Q3E823 68 aa1.02□□□□□ -2.25
YPK3YBR028C YDR524C-BQ3E6R4 66 aa1.01□□□□□ -2.25
YPK3YBR028C COX9P07255 59 aa1□□□□□ -2.25
YPK3YBR028C YLR342W-AQ3E810 57 aa1□□□□□ -2.25
YPK3YBR028C YJL133C-AQ3E7A3 74 aa0.97□□□□□ -2.25
YPK3YBR028C YOR072W-BQ3E832 53 aa0.96□□□□□ -2.26
YPK3YBR028C DDR2P89113 61 aa0.95□□□□□ -2.26
YPK3YBR028C YOR316C-AQ3E806 69 aa0.95□□□□□ -2.26
YPK3YBR028C YLL006W-AQ3E814 58 aa0.95□□□□□ -2.26
YPK3YBR028C YGL258W-AQ3E740 77 aa0.94□□□□□ -2.26
YPK3YBR028C RPS29AP41057 56 aaKnown RBP0.91□□□□□ -2.26
YPK3YBR028C FLO1P32768 1537 aa0.85□□□□□ -2.27
YPK3YBR028C RPL29P05747 59 aaPredicted RBP0.83□□□□□ -2.28
YPK3YBR028C UTP20P35194 2493 aaKnown RBP0.83□□□□□ -2.28
YPK3YBR028C TOR1P35169 2470 aa0.81□□□□□ -2.28
YPK3YBR028C TOM7P53507 60 aa0.81□□□□□ -2.28
YPK3YBR028C YDR034C-AP0C289 58 aa0.79□□□□□ -2.28
YPK3YBR028C YJL127C-BQ3E828 52 aa0.79□□□□□ -2.28
YPK3YBR028C YHR073W-AP0C5N7 58 aa0.76□□□□□ -2.29
YPK3YBR028C YHR050W-AQ05451 56 aa0.68□□□□□ -2.3
YPK3YBR028C PMP3P87284 55 aa0.62□□□□□ -2.31
YPK3YBR028C HOR7Q05827 59 aa0.6□□□□□ -2.31
YPK3YBR028C YML054C-AQ3E809 52 aa0.59□□□□□ -2.31
YPK3YBR028C TOR2P32600 2474 aaKnown RBP0.59□□□□□ -2.32
YPK3YBR028C Q0017Q9ZZX8 53 aa0.58□□□□□ -2.32
YPK3YBR028C MEC1P38111 2368 aa0.55□□□□□ -2.32
YPK3YBR028C FMP27Q06179 2628 aa0.53□□□□□ -2.33
YPK3YBR028C NCE101Q02820 53 aa0.49□□□□□ -2.33
YPK3YBR028C YPR117WQ06116 2489 aa0.49□□□□□ -2.33
YPK3YBR028C DYN1P36022 4092 aa0.47□□□□□ -2.33
YPK3YBR028C TRA1P38811 3744 aa0.47□□□□□ -2.33
YPK3YBR028C CSF1Q12150 2958 aa0.44□□□□□ -2.34
YPK3YBR028C GCN1P33892 2672 aaKnown RBP0.42□□□□□ -2.34
YPK3YBR028C IRA1P18963 3092 aa0.37□□□□□ -2.35
YPK3YBR028C TEL1P38110 2787 aa0.35□□□□□ -2.35
YPK3YBR028C IRA2P19158 3079 aa0.25□□□□□ -2.37
YPK3YBR028C VPS13Q07878 3144 aa0.24□□□□□ -2.37
YPK3YBR028C YLL066W-BQ8TGJ7 56 aa0.24□□□□□ -2.37
YPK3YBR028C YMR105W-AQ8TGS8 64 aa0.24□□□□□ -2.37
YPK3YBR028C NUM1Q00402 2748 aa0.18□□□□□ -2.38
YPK3YBR028C CUP1-1P0CX80 61 aa0.18□□□□□ -2.38
YPK3YBR028C CUP1-2P0CX81 61 aa0.18□□□□□ -2.38
YPK3YBR028C YBR056W-AI2HB52 66 aa0.15□□□□□ -2.39
YPK3YBR028C RPL39P04650 51 aa0.11□□□□□ -2.39
YPK3YBR028C YIL046W-AQ3E7Z4 54 aa0.06□□□□□ -2.4
YPK3YBR028C TOM1Q03280 3268 aa0.05□□□□□ -2.4
YPK3YBR028C Q0297Q9ZZV8 51 aa0.03□□□□□ -2.4
YPK3YBR028C MDN1Q12019 4910 aaKnown RBP0.02□□□□□ -2.41
YPK3YBR028C YDR034W-BQ6Q5X2 51 aa-0.06□□□□□ -2.42
Retrieved 63 of 5,963 RNA–protein pairs in 49.4 ms