RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ZNF268Q14587 947 aaPredicted RBP16.58■□□□□ 0.24
USB1-208ENST00000563207 FILIP1LQ4L180 1135 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 TRIM65Q6PJ69 517 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 C4orf50Q6ZRC1 276 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 LUZP1Q86V48 1076 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 SH3RF2Q8TEC5 729 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 INTS2Q9H0H0 1204 aaKnown RBP16.58■□□□□ 0.24
USB1-208ENST00000563207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.58■□□□□ 0.243e-9■■■■■ 81.5
USB1-208ENST00000563207 UXTQ9UBK9 157 aaPredicted RBP16.58■□□□□ 0.24
USB1-208ENST00000563207 DAAM1Q9Y4D1 1078 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 KIAA1549LQ6ZVL6 1849 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 TRAV19A0A0A6YYK7 116 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 TRDMT1O14717 391 aaKnown RBP16.57■□□□□ 0.24
USB1-208ENST00000563207 USP17L7P0C7H9 530 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 ATP1A3P13637 1013 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 HDCP19113 662 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 PON1P27169 355 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 NRLP54845 237 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 IFRD2Q12894 506 aaPredicted RBP16.57■□□□□ 0.24
USB1-208ENST00000563207 USP4Q13107 963 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 ORC1Q13415 861 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 SIM2Q14190 667 aaPredicted RBP16.57■□□□□ 0.24
USB1-208ENST00000563207 EML3Q32P44 896 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
USB1-208ENST00000563207 DENND5BQ6ZUT9 1274 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 APTXQ7Z2E3 356 aaKnown RBP16.57■□□□□ 0.24
USB1-208ENST00000563207 CRYBG2Q8N1P7 616 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 SPATA17Q96L03 361 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 KCNK16Q96T55 309 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 CRACR2AQ9BSW2 395 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 IER2Q9BTL4 223 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 NT5C1AQ9BXI3 368 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 ECT2Q9H8V3 914 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 KIF9Q9HAQ2 790 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 DUS2Q9NX74 493 aaKnown RBP16.57■□□□□ 0.24
USB1-208ENST00000563207 DLL3Q9NYJ7 618 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 APEX2Q9UBZ4 518 aa16.57■□□□□ 0.24
USB1-208ENST00000563207 RNF40O75150 1001 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 CILPO75339 1184 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 PAPSS2O95340 614 aaPredicted RBP16.56■□□□□ 0.24
USB1-208ENST00000563207 SLC9A1P19634 815 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 NDST1P52848 882 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 PPP2R5DQ14738 602 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 GAB4Q2WGN9 574 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 C1orf228Q6PIY5 440 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 PAQR9Q6ZVX9 377 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 ERMP1Q7Z2K6 904 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 LONP2Q86WA8 852 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 SFTPA1Q8IWL2 248 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 PPM1KQ8N3J5 372 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 B3GALNT2Q8NCR0 500 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 OSCP1Q8WVF1 389 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 PLCB1Q9NQ66 1216 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 CISHQ9NSE2 258 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 SMPD4Q9NXE4 827 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 ZMYM5Q9UJ78 669 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 USP18Q9UMW8 372 aa16.56■□□□□ 0.24
USB1-208ENST00000563207 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.56■□□□□ 0.24
USB1-208ENST00000563207 CEP250Q9BV73 2442 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 ZNF840PA6NDX5 716 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 SOBPA7XYQ1 873 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 ABL1P00519 1130 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 PGFP49763 221 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 MFAP3P55082 362 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 LRMPQ12912 555 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 TAF10Q12962 218 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 PDGFRLQ15198 375 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 CCDC6Q16204 474 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 DGLUCYQ7Z3D6 616 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 C8orf48Q96LL4 319 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 TTLL2Q9BWV7 592 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 HMGXB4Q9UGU5 601 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 KIAA1257Q9ULG3 409 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 MYOFQ9NZM1 2061 aa16.55■□□□□ 0.24
USB1-208ENST00000563207 RALGAPA1Q6GYQ0 2036 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 LEFTY2O00292 366 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 SERPINC1P01008 464 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 CD58P19256 250 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 ANXA13P27216 316 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 IFNAR2P48551 515 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 ATXN1P54253 815 aaKnown RBP16.54■□□□□ 0.24
USB1-208ENST00000563207 UBXN1Q04323 297 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 MESP2Q0VG99 397 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 GRSF1Q12849 480 aaKnown RBP eCLIP16.54■□□□□ 0.24
USB1-208ENST00000563207 SYNPOQ8N3V7 929 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 FAM160A2Q8N612 972 aaPredicted RBP16.54■□□□□ 0.24
USB1-208ENST00000563207 SCAMP5Q8TAC9 235 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 CEP295NLQ96MC4 621 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 P2RY13Q9BPV8 354 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 UBE2TQ9NPD8 197 aaPredicted RBP16.54■□□□□ 0.24
USB1-208ENST00000563207 RTN4Q9NQC3 1192 aaKnown RBP16.54■□□□□ 0.24
USB1-208ENST00000563207 TRPM5Q9NZQ8 1165 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 ARHGAP26Q9UNA1 814 aa16.54■□□□□ 0.24
USB1-208ENST00000563207 CACNA1AO00555 2505 aa16.53■□□□□ 0.24
USB1-208ENST00000563207 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms