RNA–Protein interactions for RNA: tC(GCA)G

tC(GCA)G, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)G, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)GtC(GCA)G IRA1P18963 3092 aa4.44□□□□□ -1.7
tC(GCA)GtC(GCA)G CAN1P04817 590 aa4.43□□□□□ -1.7
tC(GCA)GtC(GCA)G YJL007CP47080 104 aa4.43□□□□□ -1.7
tC(GCA)GtC(GCA)G MAP1Q01662 387 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
tC(GCA)GtC(GCA)G FMP30Q02883 468 aa4.43□□□□□ -1.7
tC(GCA)GtC(GCA)G SSP2Q08646 371 aa4.43□□□□□ -1.7
tC(GCA)GtC(GCA)G STB3Q12427 513 aa4.43□□□□□ -1.7
tC(GCA)GtC(GCA)G GCN1P33892 2672 aaKnown RBP4.42□□□□□ -1.7
tC(GCA)GtC(GCA)G SPT21P35209 758 aa4.42□□□□□ -1.7
tC(GCA)GtC(GCA)G PRP42Q03776 544 aaKnown RBP4.42□□□□□ -1.7
tC(GCA)GtC(GCA)G FMP27Q06179 2628 aa4.42□□□□□ -1.7
tC(GCA)GtC(GCA)G ARP8Q12386 881 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
tC(GCA)GtC(GCA)G MDM20Q12387 796 aaKnown RBP4.42□□□□□ -1.7
tC(GCA)GtC(GCA)G ACC1Q00955 2233 aaKnown RBP4.42□□□□□ -1.7
tC(GCA)GtC(GCA)G MLP1Q02455 1875 aaKnown RBP4.41□□□□□ -1.7
tC(GCA)GtC(GCA)G SIS1P25294 352 aaKnown RBP4.41□□□□□ -1.7
tC(GCA)GtC(GCA)G RDH54P38086 958 aa4.41□□□□□ -1.7
tC(GCA)GtC(GCA)G SPL2P38839 148 aa4.41□□□□□ -1.7
tC(GCA)GtC(GCA)G KEL1P38853 1164 aaKnown RBP4.41□□□□□ -1.7
tC(GCA)GtC(GCA)G ICL2Q12031 575 aa4.41□□□□□ -1.7
tC(GCA)GtC(GCA)G YDJ1P25491 409 aaKnown RBP4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G CDC60P26637 1090 aaKnown RBP4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G IRE1P32361 1115 aa4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G AVT3P36062 692 aa4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G ICP55P40051 511 aa4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G ZDS2P54786 942 aa4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G YPR204WQ08995 1032 aa4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G SSK22P25390 1331 aaPredicted RBP4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G TUS1Q06412 1307 aa4.4□□□□□ -1.71
tC(GCA)GtC(GCA)G SRS2P12954 1174 aa4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G KCC4P25389 1037 aa4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G GRX4P32642 244 aa4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G NET1P47035 1189 aa4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G YJR107WP47145 328 aa4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G ZDS1P50111 915 aaKnown RBP4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G CTF4Q01454 927 aa4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G CFT2Q12102 859 aaPredicted RBP4.39□□□□□ -1.71
tC(GCA)GtC(GCA)G AIM21P40563 679 aa4.38□□□□□ -1.71
tC(GCA)GtC(GCA)G YJL171CP46992 396 aa4.38□□□□□ -1.71
tC(GCA)GtC(GCA)G VPS64Q03944 604 aa4.38□□□□□ -1.71
tC(GCA)GtC(GCA)G AOS1Q06624 347 aa4.38□□□□□ -1.71
tC(GCA)GtC(GCA)G TY3A-GQ12173 290 aa4.38□□□□□ -1.71
tC(GCA)GtC(GCA)G DPH6Q12429 685 aa4.38□□□□□ -1.71
tC(GCA)GtC(GCA)G TY3A-IQ99219 290 aa4.38□□□□□ -1.71
tC(GCA)GtC(GCA)G ARG82P07250 355 aa4.37□□□□□ -1.71
tC(GCA)GtC(GCA)G BCS1P32839 456 aa4.37□□□□□ -1.71
tC(GCA)GtC(GCA)G MCD4P36051 919 aa4.37□□□□□ -1.71
tC(GCA)GtC(GCA)G TPS3P38426 1054 aaKnown RBP4.37□□□□□ -1.71
tC(GCA)GtC(GCA)G FKH1P40466 484 aa4.37□□□□□ -1.71
tC(GCA)GtC(GCA)G UBX2Q04228 584 aa4.37□□□□□ -1.71
tC(GCA)GtC(GCA)G TAP42Q04372 366 aa4.37□□□□□ -1.71
tC(GCA)GtC(GCA)G RPL40AP0CH08 128 aaKnown RBP4.36□□□□□ -1.71
tC(GCA)GtC(GCA)G RPL40BP0CH09 128 aaKnown RBP4.36□□□□□ -1.71
tC(GCA)GtC(GCA)G RTG3P38165 486 aa4.36□□□□□ -1.71
tC(GCA)GtC(GCA)G FCP1Q03254 732 aa4.36□□□□□ -1.71
tC(GCA)GtC(GCA)G ECM29P38737 1868 aa4.35□□□□□ -1.71
tC(GCA)GtC(GCA)G GRS1P38088 690 aaKnown RBP4.35□□□□□ -1.71
tC(GCA)GtC(GCA)G KSP1P38691 1029 aaKnown RBP4.35□□□□□ -1.71
tC(GCA)GtC(GCA)G IRC4Q03036 179 aa4.35□□□□□ -1.71
tC(GCA)GtC(GCA)G PRE10P21242 288 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
tC(GCA)GtC(GCA)G RAD53P22216 821 aa4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G LCB1P25045 558 aaKnown RBP4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G MGM1P32266 881 aa4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G OCT1P35999 772 aa4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G AKL1P38080 1108 aaKnown RBP4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G MAP2P38174 421 aaKnown RBP4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G JHD1P40034 492 aa4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G MCM6P53091 1017 aaKnown RBP4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G THI3Q07471 609 aa4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G YDR524C-BQ3E6R4 66 aa4.34□□□□□ -1.71
tC(GCA)GtC(GCA)G CAD1P24813 409 aaKnown RBP4.33□□□□□ -1.72
tC(GCA)GtC(GCA)G NGR1P32831 672 aaKnown RBP4.33□□□□□ -1.72
tC(GCA)GtC(GCA)G ACA1P39970 489 aa4.33□□□□□ -1.72
tC(GCA)GtC(GCA)G RSC8P43609 557 aaKnown RBP4.33□□□□□ -1.72
tC(GCA)GtC(GCA)G ART5P53244 586 aaKnown RBP4.33□□□□□ -1.72
tC(GCA)GtC(GCA)G ADR1P07248 1323 aa4.32□□□□□ -1.72
tC(GCA)GtC(GCA)G POL5P39985 1022 aaKnown RBP4.32□□□□□ -1.72
tC(GCA)GtC(GCA)G PKH1Q03407 766 aa4.32□□□□□ -1.72
tC(GCA)GtC(GCA)G ACK1Q07622 623 aaPredicted RBP4.32□□□□□ -1.72
tC(GCA)GtC(GCA)G MET7Q08645 548 aa4.32□□□□□ -1.72
tC(GCA)GtC(GCA)G YDR461C-AQ2V2P7 80 aa4.32□□□□□ -1.72
tC(GCA)GtC(GCA)G PMA1P05030 918 aaKnown RBP4.31□□□□□ -1.72
tC(GCA)GtC(GCA)G NTH2P35172 780 aa4.31□□□□□ -1.72
tC(GCA)GtC(GCA)G YTA12P40341 825 aa4.31□□□□□ -1.72
tC(GCA)GtC(GCA)G WRS1Q12109 432 aaKnown RBP4.31□□□□□ -1.72
tC(GCA)GtC(GCA)G LDB19Q12502 818 aa4.31□□□□□ -1.72
tC(GCA)GtC(GCA)G SWI1P09547 1314 aa4.3□□□□□ -1.72
tC(GCA)GtC(GCA)G KAR2P16474 682 aaKnown RBP4.3□□□□□ -1.72
tC(GCA)GtC(GCA)G MXR1P40029 184 aa4.3□□□□□ -1.72
tC(GCA)GtC(GCA)G JJJ2P46997 583 aa4.3□□□□□ -1.72
tC(GCA)GtC(GCA)G FOL2P51601 243 aaKnown RBP4.3□□□□□ -1.72
tC(GCA)GtC(GCA)G PAP2P53632 584 aaKnown RBP4.3□□□□□ -1.72
tC(GCA)GtC(GCA)G DNM1P54861 757 aa4.3□□□□□ -1.72
tC(GCA)GtC(GCA)G TUB2P02557 457 aaKnown RBP4.29□□□□□ -1.72
tC(GCA)GtC(GCA)G ADP1P25371 1049 aa4.29□□□□□ -1.72
tC(GCA)GtC(GCA)G RPT3P33298 428 aaKnown RBP4.29□□□□□ -1.72
tC(GCA)GtC(GCA)G LYS14P40971 790 aa4.29□□□□□ -1.72
tC(GCA)GtC(GCA)G OYE3P41816 400 aaPredicted RBP4.29□□□□□ -1.72
tC(GCA)GtC(GCA)G MCM3P24279 971 aaKnown RBP4.28□□□□□ -1.72
tC(GCA)GtC(GCA)G EUG1P32474 517 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms