RNA–Protein interactions for RNA: snR59

snR59, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR59, Length 78 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR59	snR59	SUT1	P53032	299 aa	Known RBP	4.91	□□□□□ -1.62
snR59	snR59	CUZ1	P53899	274 aa		4.91	□□□□□ -1.62
snR59	snR59	YDL176W	Q12027	708 aa		4.91	□□□□□ -1.62
snR59	snR59	CCP1	P00431	361 aa		4.9	□□□□□ -1.63
snR59	snR59	CEM1	P39525	442 aa		4.9	□□□□□ -1.63
snR59	snR59	FIR1	P40020	876 aa		4.9	□□□□□ -1.63
snR59	snR59	APC11	Q12157	165 aa		4.9	□□□□□ -1.63
snR59	snR59	RPB10	P22139	70 aa		4.89	□□□□□ -1.63
snR59	snR59	SLD2	P34252	453 aa		4.89	□□□□□ -1.63
snR59	snR59	YBR287W	P38355	427 aa		4.89	□□□□□ -1.63
snR59	snR59	HXT8	P40886	569 aa		4.89	□□□□□ -1.63
snR59	snR59	KRE33	P53914	1056 aa	Known RBP	4.89	□□□□□ -1.63
snR59	snR59	CUS1	Q02554	436 aa	Predicted RBP	4.89	□□□□□ -1.63
snR59	snR59	YML020W	Q03722	664 aa		4.89	□□□□□ -1.63
snR59	snR59	RPC31	P17890	251 aa		4.88	□□□□□ -1.63
snR59	snR59	FPS1	P23900	669 aa		4.88	□□□□□ -1.63
snR59	snR59	SMC1	P32908	1225 aa		4.88	□□□□□ -1.63
snR59	snR59	NCL1	P38205	684 aa	Known RBP	4.88	□□□□□ -1.63
snR59	snR59	STM1	P39015	273 aa	Known RBP	4.88	□□□□□ -1.63
snR59	snR59	ACF4	P47129	309 aa		4.88	□□□□□ -1.63
snR59	snR59	SKP1	P52286	194 aa		4.88	□□□□□ -1.63
snR59	snR59	ADE12	P80210	433 aa	Known RBP	4.88	□□□□□ -1.63
snR59	snR59	YOR296W	Q08748	1289 aa		4.88	□□□□□ -1.63
snR59	snR59	TRL1	P09880	827 aa	Known RBP	4.87	□□□□□ -1.63
snR59	snR59	ISW1	P38144	1129 aa		4.87	□□□□□ -1.63
snR59	snR59	GIP1	P38229	639 aa		4.87	□□□□□ -1.63
snR59	snR59	LYS5	P50113	272 aa		4.87	□□□□□ -1.63
snR59	snR59	UFD2	P54860	961 aa		4.87	□□□□□ -1.63
snR59	snR59	YDR461C-A	Q2V2P7	80 aa		4.87	□□□□□ -1.63
snR59	snR59	BSD2	P38356	321 aa		4.86	□□□□□ -1.63
snR59	snR59	APM2	P38700	605 aa		4.86	□□□□□ -1.63
snR59	snR59	MDJ2	P42834	146 aa		4.86	□□□□□ -1.63
snR59	snR59	YGR035C	P53222	116 aa		4.86	□□□□□ -1.63
snR59	snR59	MSN1	P22148	382 aa		4.85	□□□□□ -1.63
snR59	snR59	RAD55	P38953	406 aa		4.85	□□□□□ -1.63
snR59	snR59	HEH2	Q03281	663 aa		4.85	□□□□□ -1.63
snR59	snR59	SYT1	Q06836	1226 aa		4.85	□□□□□ -1.63
snR59	snR59	SEC20	P28791	383 aa		4.84	□□□□□ -1.63
snR59	snR59	KTR2	P33550	425 aa		4.84	□□□□□ -1.63
snR59	snR59	YHL050C	P38721	697 aa		4.84	□□□□□ -1.63
snR59	snR59	YHR219W	P38900	624 aa		4.84	□□□□□ -1.63
snR59	snR59	TRS120	Q04183	1289 aa		4.84	□□□□□ -1.63
snR59	snR59	HPF1	Q05164	967 aa		4.84	□□□□□ -1.63
snR59	snR59	NOP8	Q08287	484 aa	Predicted RBP	4.84	□□□□□ -1.63
snR59	snR59	DPH6	Q12429	685 aa		4.84	□□□□□ -1.63
snR59	snR59	NTA1	P40354	457 aa		4.83	□□□□□ -1.64
snR59	snR59	JJJ3	P47138	172 aa		4.83	□□□□□ -1.64
snR59	snR59	NUT2	Q06213	157 aa		4.83	□□□□□ -1.64
snR59	snR59	IRS4	P36115	615 aa	Known RBP	4.82	□□□□□ -1.64
snR59	snR59	AIM46	P38885	310 aa		4.82	□□□□□ -1.64
snR59	snR59	RGD2	P43556	714 aa		4.82	□□□□□ -1.64
snR59	snR59	ITC1	P53125	1264 aa		4.82	□□□□□ -1.64
snR59	snR59	YNR040W	P53736	256 aa		4.82	□□□□□ -1.64
snR59	snR59	FRT1	Q99332	602 aa		4.82	□□□□□ -1.64
snR59	snR59	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
snR59	snR59	PPX1	P38698	397 aa		4.81	□□□□□ -1.64
snR59	snR59	TY1A-DR2	Q03964	440 aa	Known RBP	4.81	□□□□□ -1.64
snR59	snR59	RSC2	Q06488	889 aa		4.81	□□□□□ -1.64
snR59	snR59	MSC6	Q08818	692 aa	Known RBP	4.81	□□□□□ -1.64
snR59	snR59	TIF6	Q12522	245 aa	Known RBP	4.81	□□□□□ -1.64
snR59	snR59	MSC7	P38694	644 aa		4.8	□□□□□ -1.64
snR59	snR59	YER156C	P40093	338 aa	Known RBP	4.8	□□□□□ -1.64
snR59	snR59	PSY2	P40164	858 aa		4.8	□□□□□ -1.64
snR59	snR59	YIL165C	P40446	119 aa		4.8	□□□□□ -1.64
snR59	snR59	THI12	P42883	340 aa		4.8	□□□□□ -1.64
snR59	snR59	THI5	P43534	340 aa		4.8	□□□□□ -1.64
snR59	snR59	THI11	P47183	340 aa		4.8	□□□□□ -1.64
snR59	snR59	SEN54	Q02825	467 aa	Predicted RBP	4.8	□□□□□ -1.64
snR59	snR59	THI13	Q07748	340 aa		4.8	□□□□□ -1.64
snR59	snR59	IPL1	P38991	367 aa		4.79	□□□□□ -1.64
snR59	snR59	YNL011C	P53980	444 aa		4.79	□□□□□ -1.64
snR59	snR59	CDC55	Q00362	526 aa		4.79	□□□□□ -1.64
snR59	snR59	EMG1	Q06287	252 aa	Known RBP	4.79	□□□□□ -1.64
snR59	snR59	IDI1	P15496	288 aa		4.78	□□□□□ -1.64
snR59	snR59	PRK1	P40494	810 aa		4.78	□□□□□ -1.64
snR59	snR59	PPT1	P53043	513 aa		4.78	□□□□□ -1.64
snR59	snR59	GPM1	P00950	247 aa	Known RBP	4.77	□□□□□ -1.65
snR59	snR59	PDC5	P16467	563 aa	Known RBP	4.77	□□□□□ -1.65
snR59	snR59	TRK2	P28584	889 aa		4.77	□□□□□ -1.65
snR59	snR59	KNS1	P32350	737 aa	Predicted RBP	4.77	□□□□□ -1.65
snR59	snR59	ECM2	P38241	364 aa	Known RBP	4.77	□□□□□ -1.65
snR59	snR59	RSC4	Q02206	625 aa		4.77	□□□□□ -1.65
snR59	snR59	BSC2	Q05611	235 aa		4.77	□□□□□ -1.65
snR59	snR59	SAM37	P50110	327 aa		4.76	□□□□□ -1.65
snR59	snR59	MNL2	Q12205	849 aa		4.76	□□□□□ -1.65
snR59	snR59	HEM3	P28789	327 aa		4.75	□□□□□ -1.65
snR59	snR59	GCD6	P32501	712 aa	Known RBP	4.75	□□□□□ -1.65
snR59	snR59	YJL181W	P46987	611 aa		4.75	□□□□□ -1.65
snR59	snR59	NOC3	Q07896	663 aa	Predicted RBP	4.75	□□□□□ -1.65
snR59	snR59	AI1	P03875	834 aa		4.74	□□□□□ -1.65
snR59	snR59	FUS1	P11710	512 aa		4.74	□□□□□ -1.65
snR59	snR59	YHL008C	P38750	627 aa		4.74	□□□□□ -1.65
snR59	snR59	CIC1	P38779	376 aa	Known RBP	4.74	□□□□□ -1.65
snR59	snR59	GPI13	Q07830	1017 aa		4.74	□□□□□ -1.65
snR59	snR59	WHI5	Q12416	295 aa		4.74	□□□□□ -1.65
snR59	snR59	PYC2	P32327	1180 aa	Known RBP	4.73	□□□□□ -1.65
snR59	snR59	MET4	P32389	672 aa		4.73	□□□□□ -1.65
snR59	snR59	ASF1	P32447	279 aa		4.73	□□□□□ -1.65
snR59	snR59	MET1	P36150	593 aa		4.73	□□□□□ -1.65
snR59	snR59	ALG14	P38242	237 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms