RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 TY4B-PA0A0B7P3V8 1104 aa1.87□□□□□ -2.11
snR47snR47 MAK16P10962 306 aaPredicted RBP1.87□□□□□ -2.11
snR47snR47 SKP1P52286 194 aa1.87□□□□□ -2.11
snR47snR47 TY4A-HQ6Q5P6 413 aa1.87□□□□□ -2.11
snR47snR47 NFS1P25374 497 aa1.86□□□□□ -2.11
snR47snR47 YHL008CP38750 627 aa1.86□□□□□ -2.11
snR47snR47 YNR065CP53751 1116 aa1.86□□□□□ -2.11
snR47snR47 YNL165WP53891 406 aa1.86□□□□□ -2.11
snR47snR47 SDH1Q00711 640 aa1.86□□□□□ -2.11
snR47snR47 HPC2Q01448 625 aa1.86□□□□□ -2.11
snR47snR47 YML122CQ03207 126 aa1.86□□□□□ -2.11
snR47snR47 PRP6P19735 899 aaPredicted RBP1.84□□□□□ -2.11
snR47snR47 NCL1P38205 684 aaKnown RBP1.84□□□□□ -2.11
snR47snR47 MRP10O75012 95 aa1.83□□□□□ -2.12
snR47snR47 MCM1P11746 286 aa1.83□□□□□ -2.12
snR47snR47 YTA6P40328 754 aa1.83□□□□□ -2.12
snR47snR47 HDA3Q06623 655 aa1.83□□□□□ -2.12
snR47snR47 GCD1P09032 578 aaPredicted RBP1.82□□□□□ -2.12
snR47snR47 DSE4P53753 1117 aa1.82□□□□□ -2.12
snR47snR47 ABZ1P37254 787 aaPredicted RBP1.81□□□□□ -2.12
snR47snR47 ATF2P53296 535 aa1.81□□□□□ -2.12
snR47snR47 UTP13Q05946 817 aaKnown RBP1.81□□□□□ -2.12
snR47snR47 SWI5P08153 709 aa1.8□□□□□ -2.12
snR47snR47 MLF3P32047 452 aa1.8□□□□□ -2.12
snR47snR47 GIP2P40036 548 aa1.8□□□□□ -2.12
snR47snR47 TED1P40533 473 aa1.8□□□□□ -2.12
snR47snR47 EMP47P43555 445 aa1.8□□□□□ -2.12
snR47snR47 IDI1P15496 288 aa1.79□□□□□ -2.12
snR47snR47 APM2P38700 605 aa1.79□□□□□ -2.12
snR47snR47 YNR040WP53736 256 aa1.79□□□□□ -2.12
snR47snR47 YER156CP40093 338 aaKnown RBP1.78□□□□□ -2.12
snR47snR47 CSN12P47130 423 aa1.78□□□□□ -2.12
snR47snR47 CUS1Q02554 436 aaPredicted RBP1.78□□□□□ -2.12
snR47snR47 PNS1Q12412 539 aa1.78□□□□□ -2.12
snR47snR47 HSP78P33416 811 aa1.77□□□□□ -2.13
snR47snR47 SNM1P40993 198 aa1.77□□□□□ -2.13
snR47snR47 NCE103P53615 221 aa1.77□□□□□ -2.13
snR47snR47 ORC3P54790 616 aa1.77□□□□□ -2.13
snR47snR47 TFB3Q03290 321 aa1.77□□□□□ -2.13
snR47snR47 UTP4Q06679 776 aaKnown RBP1.77□□□□□ -2.13
snR47snR47 RPC31P17890 251 aa1.76□□□□□ -2.13
snR47snR47 ISF1P32488 338 aa1.76□□□□□ -2.13
snR47snR47 MTO1P53070 669 aa1.76□□□□□ -2.13
snR47snR47 MSH6Q03834 1242 aa1.76□□□□□ -2.13
snR47snR47 Q0182Q9ZZW1 134 aa1.76□□□□□ -2.13
snR47snR47 TUB2P02557 457 aaKnown RBP1.75□□□□□ -2.13
snR47snR47 RIM8P53179 542 aa1.75□□□□□ -2.13
snR47snR47 SOK2P53438 785 aaPredicted RBP1.75□□□□□ -2.13
snR47snR47 KAP122P32767 1081 aa1.74□□□□□ -2.13
snR47snR47 SOH1P38633 127 aa1.74□□□□□ -2.13
snR47snR47 ATG3P40344 310 aa1.74□□□□□ -2.13
snR47snR47 CBC2Q08920 208 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
snR47snR47 AIM3P38266 947 aaKnown RBP1.73□□□□□ -2.13
snR47snR47 GIC2Q06648 383 aa1.73□□□□□ -2.13
snR47snR47 RPS6AP0CX37 236 aaKnown RBP1.72□□□□□ -2.13
snR47snR47 RPS6BP0CX38 236 aaPredicted RBP1.72□□□□□ -2.13
snR47snR47 SPT5P27692 1063 aaKnown RBP1.72□□□□□ -2.13
snR47snR47 PAN5P38787 379 aa1.72□□□□□ -2.13
snR47snR47 AIM9P40053 627 aaKnown RBP1.72□□□□□ -2.13
snR47snR47 ITC1P53125 1264 aa1.72□□□□□ -2.13
snR47snR47 SLI1P53304 468 aa1.72□□□□□ -2.13
snR47snR47 YNR021WP53723 404 aaKnown RBP1.72□□□□□ -2.13
snR47snR47 CLU1Q03690 1277 aaKnown RBP1.72□□□□□ -2.13
snR47snR47 YLR358CO13565 187 aa1.71□□□□□ -2.14
snR47snR47 SOD2P00447 233 aa1.71□□□□□ -2.14
snR47snR47 SPB4P25808 606 aaPredicted RBP1.71□□□□□ -2.14
snR47snR47 CTS1P29029 562 aa1.71□□□□□ -2.14
snR47snR47 CSE4P36012 229 aa1.71□□□□□ -2.14
snR47snR47 SHM2P37291 469 aaKnown RBP1.71□□□□□ -2.14
snR47snR47 POL5P39985 1022 aaKnown RBP1.71□□□□□ -2.14
snR47snR47 SAS10Q12136 610 aaPredicted RBP1.71□□□□□ -2.14
snR47snR47 GLC3P32775 704 aa1.7□□□□□ -2.14
snR47snR47 MAE1P36013 669 aaKnown RBP1.7□□□□□ -2.14
snR47snR47 MMM1P41800 426 aa1.7□□□□□ -2.14
snR47snR47 LEM3P42838 414 aa1.7□□□□□ -2.14
snR47snR47 CIT3P43635 486 aa1.7□□□□□ -2.14
snR47snR47 PUS9Q12069 462 aa1.7□□□□□ -2.14
snR47snR47 NSI1Q12457 570 aa1.7□□□□□ -2.14
snR47snR47 OYE3P41816 400 aaPredicted RBP1.69□□□□□ -2.14
snR47snR47 GUP1P53154 560 aa1.69□□□□□ -2.14
snR47snR47 YOR059CQ08448 450 aaKnown RBP1.69□□□□□ -2.14
snR47snR47 AIM7Q12156 149 aa1.69□□□□□ -2.14
snR47snR47 TOD6P34219 525 aa1.68□□□□□ -2.14
snR47snR47 SCD5P34758 872 aa1.68□□□□□ -2.14
snR47snR47 WHI3P34761 661 aaKnown RBP1.68□□□□□ -2.14
snR47snR47 YFL034WP43564 1073 aa1.68□□□□□ -2.14
snR47snR47 MRPL22P53881 309 aa1.68□□□□□ -2.14
snR47snR47 LPX1Q12405 387 aaKnown RBP1.68□□□□□ -2.14
snR47snR47 RDS2P19541 446 aaKnown RBP1.67□□□□□ -2.14
snR47snR47 NTH2P35172 780 aa1.67□□□□□ -2.14
snR47snR47 RCM1P53972 490 aa1.67□□□□□ -2.14
snR47snR47 RSC2Q06488 889 aa1.67□□□□□ -2.14
snR47snR47 SOG2Q08817 791 aa1.67□□□□□ -2.14
snR47snR47 ELG1Q12050 791 aa1.67□□□□□ -2.14
snR47snR47 YDL177CQ12257 170 aa1.67□□□□□ -2.14
snR47snR47 SSA2P10592 639 aaKnown RBP1.66□□□□□ -2.14
snR47snR47 PRE10P21242 288 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
snR47snR47 RAD53P22216 821 aa1.66□□□□□ -2.14
snR47snR47 ADP1P25371 1049 aa1.66□□□□□ -2.14
snR47snR47 YDJ1P25491 409 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 26 ms