RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	TRL1	P09880	827 aa	Known RBP	4.62	□□□□□ -1.67
DBF20	YPR111W	GLO3	P38682	493 aa	Known RBP	4.62	□□□□□ -1.67
DBF20	YPR111W	ERP5	P38819	212 aa		4.62	□□□□□ -1.67
DBF20	YPR111W	STM1	P39015	273 aa	Known RBP	4.62	□□□□□ -1.67
DBF20	YPR111W	FIR1	P40020	876 aa		4.62	□□□□□ -1.67
DBF20	YPR111W	QDR1	P40475	563 aa		4.62	□□□□□ -1.67
DBF20	YPR111W	CUZ1	P53899	274 aa		4.62	□□□□□ -1.67
DBF20	YPR111W	RPC31	P17890	251 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	SMC1	P32908	1225 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	HXT8	P40886	569 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	LYS5	P50113	272 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	STB3	Q12427	513 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	YDR461C-A	Q2V2P7	80 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	BOI1	P38041	980 aa	Known RBP	4.61	□□□□□ -1.67
DBF20	YPR111W	CEM1	P39525	442 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	KRE33	P53914	1056 aa	Known RBP	4.61	□□□□□ -1.67
DBF20	YPR111W	YDL176W	Q12027	708 aa		4.61	□□□□□ -1.67
DBF20	YPR111W	CCP1	P00431	361 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	FPS1	P23900	669 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	GRS1	P38088	690 aa	Known RBP	4.6	□□□□□ -1.67
DBF20	YPR111W	ISW1	P38144	1129 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	NCL1	P38205	684 aa	Known RBP	4.6	□□□□□ -1.67
DBF20	YPR111W	GIP1	P38229	639 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	APM2	P38700	605 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	SUT1	P53032	299 aa	Known RBP	4.6	□□□□□ -1.67
DBF20	YPR111W	UFD2	P54860	961 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	HEH2	Q03281	663 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	YOR296W	Q08748	1289 aa		4.6	□□□□□ -1.67
DBF20	YPR111W	MDJ2	P42834	146 aa		4.59	□□□□□ -1.67
DBF20	YPR111W	CUS1	Q02554	436 aa	Predicted RBP	4.59	□□□□□ -1.67
DBF20	YPR111W	MSN1	P22148	382 aa		4.58	□□□□□ -1.68
DBF20	YPR111W	ADE12	P80210	433 aa	Known RBP	4.58	□□□□□ -1.68
DBF20	YPR111W	SYT1	Q06836	1226 aa		4.58	□□□□□ -1.68
DBF20	YPR111W	DPH6	Q12429	685 aa		4.58	□□□□□ -1.68
DBF20	YPR111W	SEC20	P28791	383 aa		4.57	□□□□□ -1.68
DBF20	YPR111W	NTA1	P40354	457 aa		4.57	□□□□□ -1.68
DBF20	YPR111W	SEN54	Q02825	467 aa	Predicted RBP	4.57	□□□□□ -1.68
DBF20	YPR111W	TRS120	Q04183	1289 aa		4.57	□□□□□ -1.68
DBF20	YPR111W	RAD55	P38953	406 aa		4.56	□□□□□ -1.68
DBF20	YPR111W	YGR035C	P53222	116 aa		4.56	□□□□□ -1.68
DBF20	YPR111W	MSC6	Q08818	692 aa	Known RBP	4.56	□□□□□ -1.68
DBF20	YPR111W	RPB10	P22139	70 aa		4.55	□□□□□ -1.68
DBF20	YPR111W	IRS4	P36115	615 aa	Known RBP	4.55	□□□□□ -1.68
DBF20	YPR111W	YHL050C	P38721	697 aa		4.55	□□□□□ -1.68
DBF20	YPR111W	YHR219W	P38900	624 aa		4.55	□□□□□ -1.68
DBF20	YPR111W	YPL062W	Q02781	134 aa		4.55	□□□□□ -1.68
DBF20	YPR111W	HPF1	Q05164	967 aa		4.55	□□□□□ -1.68
DBF20	YPR111W	KTR2	P33550	425 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	BSD2	P38356	321 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	PPX1	P38698	397 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	AIM46	P38885	310 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	RGD2	P43556	714 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	YNL011C	P53980	444 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	RSC4	Q02206	625 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	NUT2	Q06213	157 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	RSC2	Q06488	889 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	YER156C	P40093	338 aa	Known RBP	4.54	□□□□□ -1.68
DBF20	YPR111W	PSY2	P40164	858 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	YIL165C	P40446	119 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	JJJ3	P47138	172 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	ITC1	P53125	1264 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	YNR040W	P53736	256 aa		4.54	□□□□□ -1.68
DBF20	YPR111W	HEM3	P28789	327 aa		4.53	□□□□□ -1.68
DBF20	YPR111W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
DBF20	YPR111W	MSC7	P38694	644 aa		4.53	□□□□□ -1.68
DBF20	YPR111W	TY1A-DR2	Q03964	440 aa	Known RBP	4.53	□□□□□ -1.68
DBF20	YPR111W	CDC55	Q00362	526 aa		4.52	□□□□□ -1.69
DBF20	YPR111W	TIF6	Q12522	245 aa	Known RBP	4.52	□□□□□ -1.69
DBF20	YPR111W	TRK2	P28584	889 aa		4.51	□□□□□ -1.69
DBF20	YPR111W	EMG1	Q06287	252 aa	Known RBP	4.51	□□□□□ -1.69
DBF20	YPR111W	MNL2	Q12205	849 aa		4.51	□□□□□ -1.69
DBF20	YPR111W	FRT1	Q99332	602 aa		4.51	□□□□□ -1.69
DBF20	YPR111W	KNS1	P32350	737 aa	Predicted RBP	4.51	□□□□□ -1.69
DBF20	YPR111W	SAM37	P50110	327 aa		4.51	□□□□□ -1.69
DBF20	YPR111W	GPM1	P00950	247 aa	Known RBP	4.5	□□□□□ -1.69
DBF20	YPR111W	PRK1	P40494	810 aa		4.5	□□□□□ -1.69
DBF20	YPR111W	IDI1	P15496	288 aa		4.49	□□□□□ -1.69
DBF20	YPR111W	PDC5	P16467	563 aa	Known RBP	4.49	□□□□□ -1.69
DBF20	YPR111W	ECM2	P38241	364 aa	Known RBP	4.49	□□□□□ -1.69
DBF20	YPR111W	IPL1	P38991	367 aa		4.49	□□□□□ -1.69
DBF20	YPR111W	BSC2	Q05611	235 aa		4.49	□□□□□ -1.69
DBF20	YPR111W	ASF1	P32447	279 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	GCD6	P32501	712 aa	Known RBP	4.48	□□□□□ -1.69
DBF20	YPR111W	MET1	P36150	593 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	THI12	P42883	340 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	THI5	P43534	340 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	THI11	P47183	340 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	THI13	Q07748	340 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	VPS35	P34110	944 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	CIC1	P38779	376 aa	Known RBP	4.48	□□□□□ -1.69
DBF20	YPR111W	PPT1	P53043	513 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	GPI13	Q07830	1017 aa		4.48	□□□□□ -1.69
DBF20	YPR111W	AI1	P03875	834 aa		4.47	□□□□□ -1.69
DBF20	YPR111W	NOC3	Q07896	663 aa	Predicted RBP	4.47	□□□□□ -1.69
DBF20	YPR111W	YHL008C	P38750	627 aa		4.46	□□□□□ -1.7
DBF20	YPR111W	LEM3	P42838	414 aa		4.46	□□□□□ -1.7
DBF20	YPR111W	SLP1	Q12232	587 aa		4.46	□□□□□ -1.7
DBF20	YPR111W	PHO4	P07270	312 aa	Known RBP	4.45	□□□□□ -1.7
DBF20	YPR111W	FUS1	P11710	512 aa		4.45	□□□□□ -1.7
DBF20	YPR111W	MET4	P32389	672 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms