RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W PSF3Q12146 194 aa12.72□□□□□ -0.37
MSF1YPR047W PCS60P38137 543 aaKnown RBP RIP-Chip data12.71□□□□□ -0.37not detected
MSF1YPR047W BOI2P39969 1040 aa12.71□□□□□ -0.37
MSF1YPR047W UTP7P40055 554 aaKnown RBP12.71□□□□□ -0.37
MSF1YPR047W WRS1Q12109 432 aaKnown RBP12.71□□□□□ -0.37
MSF1YPR047W DUR1,2P32528 1835 aaKnown RBP12.71□□□□□ -0.38
MSF1YPR047W MTC3P53077 123 aa12.71□□□□□ -0.38
MSF1YPR047W ADR1P07248 1323 aa12.7□□□□□ -0.38
MSF1YPR047W VPS27P40343 622 aaKnown RBP12.7□□□□□ -0.38
MSF1YPR047W CST9Q06032 482 aa12.7□□□□□ -0.38
MSF1YPR047W MAK21Q12176 1025 aaKnown RBP12.69□□□□□ -0.38
MSF1YPR047W CSI1Q04368 295 aa12.68□□□□□ -0.38
MSF1YPR047W GSC2P40989 1895 aa12.67□□□□□ -0.38
MSF1YPR047W SDH2P21801 266 aa12.67□□□□□ -0.38
MSF1YPR047W NIT1P40447 199 aa12.67□□□□□ -0.38
MSF1YPR047W YJL171CP46992 396 aa12.66□□□□□ -0.38
MSF1YPR047W NCS6P53088 359 aa12.66□□□□□ -0.38
MSF1YPR047W RSC30P38781 883 aa12.65□□□□□ -0.38
MSF1YPR047W RPS19AP07280 144 aaKnown RBP12.64□□□□□ -0.39
MSF1YPR047W RPS19BP07281 144 aaPredicted RBP12.64□□□□□ -0.39
MSF1YPR047W GAL2P13181 574 aa12.64□□□□□ -0.39
MSF1YPR047W MOT2P34909 587 aaKnown RBP12.64□□□□□ -0.39
MSF1YPR047W APE3P37302 537 aaKnown RBP12.64□□□□□ -0.39
MSF1YPR047W YFH7P43591 353 aa12.64□□□□□ -0.39
MSF1YPR047W RPT3P33298 428 aaKnown RBP12.63□□□□□ -0.39
MSF1YPR047W PUS6P53294 404 aa12.62□□□□□ -0.39
MSF1YPR047W CDC45Q08032 650 aa12.62□□□□□ -0.39
MSF1YPR047W RBA50Q04418 439 aa12.62□□□□□ -0.39
MSF1YPR047W SEC18P18759 758 aaKnown RBP12.59□□□□□ -0.39
MSF1YPR047W AAD16Q02895 342 aa12.59□□□□□ -0.39
MSF1YPR047W GYP5Q12344 894 aa12.59□□□□□ -0.39
MSF1YPR047W SLA1P32790 1244 aa12.58□□□□□ -0.4
MSF1YPR047W GLO3P38682 493 aaKnown RBP12.58□□□□□ -0.4
MSF1YPR047W APL6P46682 809 aa12.57□□□□□ -0.4
MSF1YPR047W RVB2Q12464 471 aaKnown RBP12.57□□□□□ -0.4
MSF1YPR047W YIR042CP40586 236 aa12.56□□□□□ -0.4
MSF1YPR047W GIN4Q12263 1142 aa12.56□□□□□ -0.4
MSF1YPR047W RRI2Q12348 645 aa12.56□□□□□ -0.4
MSF1YPR047W PFK2P16862 959 aaKnown RBP RIP-Chip data12.55□□□□□ -0.4not detected
MSF1YPR047W PTK1P36002 662 aaPredicted RBP12.55□□□□□ -0.4
MSF1YPR047W SSF1P38789 453 aaPredicted RBP12.55□□□□□ -0.4
MSF1YPR047W JIP4Q03361 876 aa12.55□□□□□ -0.4
MSF1YPR047W INM2Q05533 292 aa12.55□□□□□ -0.4
MSF1YPR047W SNF3P10870 884 aa12.54□□□□□ -0.4
MSF1YPR047W DAL5P15365 543 aa12.54□□□□□ -0.4
MSF1YPR047W TPS3P38426 1054 aaKnown RBP12.54□□□□□ -0.4
MSF1YPR047W KEL1P38853 1164 aaKnown RBP12.54□□□□□ -0.4
MSF1YPR047W AI2P03876 854 aa12.54□□□□□ -0.4
MSF1YPR047W RAD53P22216 821 aa12.54□□□□□ -0.4
MSF1YPR047W ASH1P34233 588 aa12.54□□□□□ -0.4
MSF1YPR047W YIL092WP40497 633 aa12.54□□□□□ -0.4
MSF1YPR047W YRB30P53107 440 aaPredicted RBP12.54□□□□□ -0.4
MSF1YPR047W PEX29Q03370 554 aa12.54□□□□□ -0.4
MSF1YPR047W NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.54□□□□□ -0.4not detected
MSF1YPR047W MDL2P33311 773 aa12.53□□□□□ -0.4
MSF1YPR047W MAC1P35192 417 aa12.53□□□□□ -0.4
MSF1YPR047W HAL5P38970 855 aaKnown RBP12.53□□□□□ -0.4
MSF1YPR047W PIB1Q06651 286 aa12.53□□□□□ -0.4
MSF1YPR047W PPM2Q08282 695 aa12.53□□□□□ -0.4
MSF1YPR047W PIF1P07271 859 aa12.52□□□□□ -0.41
MSF1YPR047W YNL193WP53870 558 aa12.52□□□□□ -0.41
MSF1YPR047W PMA1P05030 918 aaKnown RBP12.51□□□□□ -0.41
MSF1YPR047W ADP1P25371 1049 aa12.51□□□□□ -0.41
MSF1YPR047W YNG2P38806 282 aaKnown RBP12.51□□□□□ -0.41
MSF1YPR047W SGD1Q06132 899 aa12.51□□□□□ -0.41
MSF1YPR047W SPR3P41901 512 aa12.5□□□□□ -0.41
MSF1YPR047W HGH1P48362 394 aaKnown RBP12.5□□□□□ -0.41
MSF1YPR047W RPN7Q06103 429 aaKnown RBP12.5□□□□□ -0.41
MSF1YPR047W GCD7P32502 381 aaPredicted RBP12.48□□□□□ -0.41
MSF1YPR047W PAM1P37304 830 aaKnown RBP12.48□□□□□ -0.41
MSF1YPR047W SPO1P53541 631 aa12.48□□□□□ -0.41
MSF1YPR047W YLR225CQ05948 407 aaKnown RBP12.48□□□□□ -0.41
MSF1YPR047W NSG2P53898 299 aa12.46□□□□□ -0.41
MSF1YPR047W FLO1P32768 1537 aa12.46□□□□□ -0.41
MSF1YPR047W NOP2P40991 618 aaKnown RBP12.45□□□□□ -0.42
MSF1YPR047W PCL8Q08966 492 aa12.45□□□□□ -0.42
MSF1YPR047W RAD2P07276 1031 aa12.45□□□□□ -0.42
MSF1YPR047W BOI1P38041 980 aaKnown RBP12.45□□□□□ -0.42
MSF1YPR047W NCB2Q92317 146 aa12.45□□□□□ -0.42
MSF1YPR047W CYB2P00175 591 aa12.44□□□□□ -0.42
MSF1YPR047W YBL028CP38202 106 aa12.44□□□□□ -0.42
MSF1YPR047W NET1P47035 1189 aa12.44□□□□□ -0.42
MSF1YPR047W PIP2P52960 996 aa12.44□□□□□ -0.42
MSF1YPR047W OCT1P35999 772 aa12.43□□□□□ -0.42
MSF1YPR047W ACA1P39970 489 aa12.43□□□□□ -0.42
MSF1YPR047W FAP1P53971 965 aa12.43□□□□□ -0.42
MSF1YPR047W ERG7P38604 731 aa12.42□□□□□ -0.42
MSF1YPR047W MSH4P40965 878 aaPredicted RBP12.42□□□□□ -0.42
MSF1YPR047W TUB2P02557 457 aaKnown RBP12.41□□□□□ -0.42
MSF1YPR047W GRX7P38068 203 aa12.41□□□□□ -0.42
MSF1YPR047W ILV3P39522 585 aaKnown RBP12.41□□□□□ -0.42
MSF1YPR047W KIN1P13185 1064 aa12.4□□□□□ -0.42
MSF1YPR047W IXR1P33417 597 aa12.4□□□□□ -0.42
MSF1YPR047W SPT21P35209 758 aa12.4□□□□□ -0.42
MSF1YPR047W SNU71P53207 620 aaKnown RBP12.39□□□□□ -0.43
MSF1YPR047W TFA1P36100 482 aa12.38□□□□□ -0.43
MSF1YPR047W YGL242CP53066 181 aa12.38□□□□□ -0.43
MSF1YPR047W YDJ1P25491 409 aaKnown RBP12.37□□□□□ -0.43
MSF1YPR047W MCD4P36051 919 aa12.37□□□□□ -0.43
MSF1YPR047W KTR3P38130 404 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms