RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C RSF2P46974 1380 aa3.91□□□□□ -1.78
RPA135YPR010C MDL2P33311 773 aa3.9□□□□□ -1.78
RPA135YPR010C PMC1P38929 1173 aaPredicted RBP3.9□□□□□ -1.78
RPA135YPR010C MLC1P53141 149 aa3.9□□□□□ -1.78
RPA135YPR010C APC11Q12157 165 aa3.9□□□□□ -1.78
RPA135YPR010C HSP82P02829 709 aaKnown RBP3.9□□□□□ -1.79
RPA135YPR010C RNR2P09938 399 aaKnown RBP3.9□□□□□ -1.79
RPA135YPR010C DIT2P21595 489 aa3.9□□□□□ -1.79
RPA135YPR010C FRD1P32614 470 aaKnown RBP3.9□□□□□ -1.79
RPA135YPR010C SET1P38827 1080 aaKnown RBP3.9□□□□□ -1.79
RPA135YPR010C SLN1P39928 1220 aaPredicted RBP3.9□□□□□ -1.79
RPA135YPR010C PEX14P53112 341 aa3.9□□□□□ -1.79
RPA135YPR010C NOB1Q08444 459 aaKnown RBP3.9□□□□□ -1.79
RPA135YPR010C RIM20Q12033 661 aa3.9□□□□□ -1.79
RPA135YPR010C AIM7Q12156 149 aa3.9□□□□□ -1.79
RPA135YPR010C NOC2P39744 710 aaKnown RBP3.9□□□□□ -1.79
RPA135YPR010C NPA3P47122 385 aa3.9□□□□□ -1.79
RPA135YPR010C MRD1Q06106 887 aaKnown RBP3.9□□□□□ -1.79
RPA135YPR010C RRP15Q06511 250 aaPredicted RBP3.9□□□□□ -1.79
RPA135YPR010C GRX1P25373 110 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C EPL1P43572 832 aa3.89□□□□□ -1.79
RPA135YPR010C MRPS35P53292 345 aa3.89□□□□□ -1.79
RPA135YPR010C ALO1P54783 526 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C RIX7Q07844 837 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C YPR204WQ08995 1032 aa3.89□□□□□ -1.79
RPA135YPR010C SWI1P09547 1314 aa3.89□□□□□ -1.79
RPA135YPR010C RPL19AP0CX82 189 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C RPL19BP0CX83 189 aaPredicted RBP3.89□□□□□ -1.79
RPA135YPR010C SAC6P32599 642 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C YGL242CP53066 181 aa3.89□□□□□ -1.79
RPA135YPR010C BRE1Q07457 700 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C SSA2P10592 639 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C SNF2P22082 1703 aa3.89□□□□□ -1.79
RPA135YPR010C ROX1P25042 368 aa3.89□□□□□ -1.79
RPA135YPR010C TOA1P32773 286 aa3.89□□□□□ -1.79
RPA135YPR010C BUD6P41697 788 aa3.89□□□□□ -1.79
RPA135YPR010C ALD2P47771 506 aa3.89□□□□□ -1.79
RPA135YPR010C CTF18P49956 741 aa3.89□□□□□ -1.79
RPA135YPR010C TFB3Q03290 321 aa3.89□□□□□ -1.79
RPA135YPR010C SGD1Q06132 899 aa3.89□□□□□ -1.79
RPA135YPR010C GRE2Q12068 342 aaKnown RBP3.89□□□□□ -1.79
RPA135YPR010C APC1P53886 1748 aa3.88□□□□□ -1.79
RPA135YPR010C SES1P07284 462 aaKnown RBP3.88□□□□□ -1.79
RPA135YPR010C SEC18P18759 758 aaKnown RBP3.88□□□□□ -1.79
RPA135YPR010C ACE2P21192 770 aa3.88□□□□□ -1.79
RPA135YPR010C ASF1P32447 279 aa3.88□□□□□ -1.79
RPA135YPR010C SVL3Q03088 825 aaKnown RBP3.88□□□□□ -1.79
RPA135YPR010C TPM1P17536 199 aaKnown RBP3.88□□□□□ -1.79
RPA135YPR010C MIC60P36112 540 aa3.88□□□□□ -1.79
RPA135YPR010C RSC1P53236 928 aa3.88□□□□□ -1.79
RPA135YPR010C INM2Q05533 292 aa3.88□□□□□ -1.79
RPA135YPR010C THI3Q07471 609 aa3.88□□□□□ -1.79
RPA135YPR010C BUG1Q12191 341 aa3.88□□□□□ -1.79
RPA135YPR010C PIL1P53252 339 aaKnown RBP3.88□□□□□ -1.79
RPA135YPR010C DCD1P06773 312 aa3.87□□□□□ -1.79
RPA135YPR010C RGP1P16664 663 aa3.87□□□□□ -1.79
RPA135YPR010C SNF7P39929 240 aaKnown RBP3.87□□□□□ -1.79
RPA135YPR010C RPT4P53549 437 aaKnown RBP3.87□□□□□ -1.79
RPA135YPR010C BDF2Q07442 638 aa3.87□□□□□ -1.79
RPA135YPR010C TRS33Q99394 268 aa3.87□□□□□ -1.79
RPA135YPR010C TY1B-NL2Q99337 1749 aaKnown RBP3.87□□□□□ -1.79
RPA135YPR010C ARG8P18544 423 aa3.87□□□□□ -1.79
RPA135YPR010C KTR1P27810 393 aaKnown RBP3.87□□□□□ -1.79
RPA135YPR010C MSP1P28737 362 aa3.87□□□□□ -1.79
RPA135YPR010C RFC5P38251 354 aa3.87□□□□□ -1.79
RPA135YPR010C YDR306CQ06640 478 aa3.87□□□□□ -1.79
RPA135YPR010C RPA135P22138 1203 aaKnown RBP3.87□□□□□ -1.79
RPA135YPR010C YKR075CP36155 307 aa3.86□□□□□ -1.79
RPA135YPR010C YAF9P53930 226 aa3.86□□□□□ -1.79
RPA135YPR010C SVF1Q05515 481 aa3.86□□□□□ -1.79
RPA135YPR010C SMD2Q06217 110 aaKnown RBP3.86□□□□□ -1.79
RPA135YPR010C SIR4P11978 1358 aa3.86□□□□□ -1.79
RPA135YPR010C AAP1P37898 856 aaKnown RBP3.86□□□□□ -1.79
RPA135YPR010C RPG1P38249 964 aaKnown RBP3.86□□□□□ -1.79
RPA135YPR010C ATG32P40458 529 aa3.86□□□□□ -1.79
RPA135YPR010C JJJ2P46997 583 aa3.86□□□□□ -1.79
RPA135YPR010C UBP16Q02863 499 aa3.86□□□□□ -1.79
RPA135YPR010C PSR2Q07949 397 aa3.86□□□□□ -1.79
RPA135YPR010C HAT1Q12341 374 aa3.86□□□□□ -1.79
RPA135YPR010C EDE1P34216 1381 aa3.86□□□□□ -1.79
RPA135YPR010C PBS2P08018 668 aa3.85□□□□□ -1.79
RPA135YPR010C BUD31P25337 157 aaPredicted RBP3.85□□□□□ -1.79
RPA135YPR010C MGM1P32266 881 aa3.85□□□□□ -1.79
RPA135YPR010C YKE2P52553 114 aa3.85□□□□□ -1.79
RPA135YPR010C CSC1Q06538 782 aa3.85□□□□□ -1.79
RPA135YPR010C GYP5Q12344 894 aa3.85□□□□□ -1.79
RPA135YPR010C ERG12P07277 443 aa3.85□□□□□ -1.79
RPA135YPR010C RRP43P25359 394 aaPredicted RBP3.85□□□□□ -1.79
RPA135YPR010C PRX1P34227 261 aaKnown RBP3.85□□□□□ -1.79
RPA135YPR010C RSM25P40496 264 aa3.85□□□□□ -1.79
RPA135YPR010C EIS1Q05050 843 aaKnown RBP3.85□□□□□ -1.79
RPA135YPR010C PHM7Q12252 991 aa3.85□□□□□ -1.79
RPA135YPR010C NYV1Q12255 253 aa3.85□□□□□ -1.79
RPA135YPR010C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
RPA135YPR010C MAG2Q06436 670 aaKnown RBP3.85□□□□□ -1.79
RPA135YPR010C TFC8Q12308 588 aa3.85□□□□□ -1.79
RPA135YPR010C GCD7P32502 381 aaPredicted RBP3.84□□□□□ -1.79
RPA135YPR010C KTR3P38130 404 aaPredicted RBP3.84□□□□□ -1.79
RPA135YPR010C RVS167P39743 482 aaKnown RBP3.84□□□□□ -1.79
RPA135YPR010C PTK1P36002 662 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms