RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeastyeast

Gene ATG29, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG29YPL166W SKP1P52286 194 aa7.68□□□□□ -1.18
ATG29YPL166W SUB2Q07478 446 aaKnown RBP7.68□□□□□ -1.18
ATG29YPL166W CUS1Q02554 436 aaPredicted RBP7.67□□□□□ -1.18
ATG29YPL166W YDR215CQ12240 137 aa7.67□□□□□ -1.18
ATG29YPL166W NCL1P38205 684 aaKnown RBP7.66□□□□□ -1.18
ATG29YPL166W SLN1P39928 1220 aaPredicted RBP7.66□□□□□ -1.18
ATG29YPL166W PUP1P25043 261 aa7.65□□□□□ -1.18
ATG29YPL166W CWH41P53008 833 aa7.65□□□□□ -1.18
ATG29YPL166W UBX7P38349 436 aa7.64□□□□□ -1.19
ATG29YPL166W PRK1P40494 810 aa7.64□□□□□ -1.19
ATG29YPL166W TRS33Q99394 268 aa7.64□□□□□ -1.19
ATG29YPL166W SBP1P10080 294 aaKnown RBP7.63□□□□□ -1.19
ATG29YPL166W SUV3P32580 737 aa7.63□□□□□ -1.19
ATG29YPL166W APM2P38700 605 aa7.63□□□□□ -1.19
ATG29YPL166W QDR2P40474 542 aa7.63□□□□□ -1.19
ATG29YPL166W YNR040WP53736 256 aa7.63□□□□□ -1.19
ATG29YPL166W NOB1Q08444 459 aaKnown RBP7.63□□□□□ -1.19
ATG29YPL166W RPC31P17890 251 aa7.62□□□□□ -1.19
ATG29YPL166W PRY1P47032 299 aa7.61□□□□□ -1.19
ATG29YPL166W CAB1Q04430 367 aa7.61□□□□□ -1.19
ATG29YPL166W PGM2P37012 569 aaKnown RBP7.6□□□□□ -1.19
ATG29YPL166W TAT1P38085 619 aa7.6□□□□□ -1.19
ATG29YPL166W ALG14P38242 237 aa7.6□□□□□ -1.19
ATG29YPL166W YML083CQ04526 418 aa7.6□□□□□ -1.19
ATG29YPL166W MCA1Q08601 432 aa7.6□□□□□ -1.19
ATG29YPL166W NHA1Q99271 985 aa7.6□□□□□ -1.19
ATG29YPL166W FOX2Q02207 900 aaKnown RBP7.58□□□□□ -1.2
ATG29YPL166W SSA1P10591 642 aaKnown RBP7.57□□□□□ -1.2
ATG29YPL166W MRPL33P20084 86 aa7.57□□□□□ -1.2
ATG29YPL166W AMN1P38285 549 aaPredicted RBP7.57□□□□□ -1.2
ATG29YPL166W TPS3P38426 1054 aaKnown RBP7.57□□□□□ -1.2
ATG29YPL166W LSB6P42951 607 aa7.57□□□□□ -1.2
ATG29YPL166W NAR1P23503 491 aaKnown RBP7.56□□□□□ -1.2
ATG29YPL166W VMA3P25515 160 aa7.56□□□□□ -1.2
ATG29YPL166W NAB2P32505 525 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
ATG29YPL166W YBR197CP38306 217 aa7.55□□□□□ -1.2
ATG29YPL166W NRD1P53617 575 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
ATG29YPL166W GIS4Q04233 774 aa7.55□□□□□ -1.2
ATG29YPL166W ITC1P53125 1264 aa7.54□□□□□ -1.2
ATG29YPL166W MRP10O75012 95 aa7.53□□□□□ -1.2
ATG29YPL166W DYS1P38791 387 aa7.53□□□□□ -1.2
ATG29YPL166W ALD4P46367 519 aaKnown RBP7.53□□□□□ -1.2
ATG29YPL166W BUD9P53226 547 aa7.53□□□□□ -1.2
ATG29YPL166W RPL34AP87262 121 aaPredicted RBP7.53□□□□□ -1.2
ATG29YPL166W YOR296WQ08748 1289 aa7.53□□□□□ -1.2
ATG29YPL166W IDI1P15496 288 aa7.52□□□□□ -1.21
ATG29YPL166W PUF6Q04373 656 aaKnown RBP7.52□□□□□ -1.21
ATG29YPL166W PUN1Q06991 263 aa7.52□□□□□ -1.21
ATG29YPL166W LDH1P38139 375 aa7.51□□□□□ -1.21
ATG29YPL166W ISC10P32645 267 aa7.5□□□□□ -1.21
ATG29YPL166W GIP1P38229 639 aa7.5□□□□□ -1.21
ATG29YPL166W BSD2P38356 321 aa7.5□□□□□ -1.21
ATG29YPL166W YPL034WQ03083 165 aa7.5□□□□□ -1.21
ATG29YPL166W GEF1P37020 779 aa7.49□□□□□ -1.21
ATG29YPL166W YER156CP40093 338 aaKnown RBP7.49□□□□□ -1.21
ATG29YPL166W GLT1Q12680 2145 aaKnown RBP7.48□□□□□ -1.21
ATG29YPL166W RRM3P38766 723 aa7.47□□□□□ -1.21
ATG29YPL166W SRS2P12954 1174 aa7.46□□□□□ -1.22
ATG29YPL166W GAS5Q08193 484 aa7.46□□□□□ -1.22
ATG29YPL166W ISW1P38144 1129 aa7.45□□□□□ -1.22
ATG29YPL166W AI3P03877 415 aa7.44□□□□□ -1.22
ATG29YPL166W CWC15Q03772 175 aaKnown RBP7.44□□□□□ -1.22
ATG29YPL166W MSN1P22148 382 aa7.43□□□□□ -1.22
ATG29YPL166W SAC7P17121 654 aa7.42□□□□□ -1.22
ATG29YPL166W YIL165CP40446 119 aa7.42□□□□□ -1.22
ATG29YPL166W RSC2Q06488 889 aa7.42□□□□□ -1.22
ATG29YPL166W SLP1Q12232 587 aa7.42□□□□□ -1.22
ATG29YPL166W YJL181WP46987 611 aa7.41□□□□□ -1.22
ATG29YPL166W TY4B-PA0A0B7P3V8 1104 aa7.4□□□□□ -1.22
ATG29YPL166W CDC3P32457 520 aaKnown RBP7.4□□□□□ -1.22
ATG29YPL166W SFA1P32771 386 aa7.4□□□□□ -1.22
ATG29YPL166W GIP2P40036 548 aa7.4□□□□□ -1.22
ATG29YPL166W TED1P40533 473 aa7.4□□□□□ -1.22
ATG29YPL166W SOK2P53438 785 aaPredicted RBP7.4□□□□□ -1.22
ATG29YPL166W PNP1Q05788 311 aa7.4□□□□□ -1.22
ATG29YPL166W TY4A-HQ6Q5P6 413 aa7.4□□□□□ -1.22
ATG29YPL166W PPT1P53043 513 aa7.39□□□□□ -1.23
ATG29YPL166W RRN6P32786 894 aa7.38□□□□□ -1.23
ATG29YPL166W FIR1P40020 876 aa7.38□□□□□ -1.23
ATG29YPL166W HXT8P40886 569 aa7.38□□□□□ -1.23
ATG29YPL166W ARI1P53111 347 aaKnown RBP7.38□□□□□ -1.23
ATG29YPL166W ALO1P54783 526 aaKnown RBP7.38□□□□□ -1.23
ATG29YPL166W YBR287WP38355 427 aa7.37□□□□□ -1.23
ATG29YPL166W EMG1Q06287 252 aaKnown RBP7.37□□□□□ -1.23
ATG29YPL166W MAC1P35192 417 aa7.36□□□□□ -1.23
ATG29YPL166W PGM1P33401 570 aaKnown RBP7.35□□□□□ -1.23
ATG29YPL166W SUT1P53032 299 aaKnown RBP7.35□□□□□ -1.23
ATG29YPL166W FUR4P05316 633 aaKnown RBP7.34□□□□□ -1.23
ATG29YPL166W BOI1P38041 980 aaKnown RBP7.34□□□□□ -1.23
ATG29YPL166W AIM46P38885 310 aa7.34□□□□□ -1.23
ATG29YPL166W INP51P40559 946 aaKnown RBP7.34□□□□□ -1.23
ATG29YPL166W RSC6P25632 483 aa7.33□□□□□ -1.24
ATG29YPL166W RGD2P43556 714 aa7.33□□□□□ -1.24
ATG29YPL166W KAR5Q04746 504 aa7.33□□□□□ -1.24
ATG29YPL166W TY1A-NL1Q12391 440 aaKnown RBP7.33□□□□□ -1.24
ATG29YPL166W KTR2P33550 425 aa7.32□□□□□ -1.24
ATG29YPL166W OMA1P36163 345 aa7.32□□□□□ -1.24
ATG29YPL166W APC11Q12157 165 aa7.32□□□□□ -1.24
ATG29YPL166W COQ2P32378 372 aa7.31□□□□□ -1.24
ATG29YPL166W BIO5P53744 561 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms