RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	AIM9	P40053	627 aa	Known RBP	12.34	□□□□□ -0.43
HHO1	YPL127C	DUR1,2	P32528	1835 aa	Known RBP	12.33	□□□□□ -0.44
HHO1	YPL127C	CLC1	P17891	233 aa		12.33	□□□□□ -0.44
HHO1	YPL127C	ROX1	P25042	368 aa		12.33	□□□□□ -0.44
HHO1	YPL127C	FRD1	P32614	470 aa	Known RBP	12.33	□□□□□ -0.44
HHO1	YPL127C	NPL4	P33755	580 aa		12.33	□□□□□ -0.44
HHO1	YPL127C	KRI1	P42846	591 aa	Known RBP	12.33	□□□□□ -0.44
HHO1	YPL127C	BBC1	P47068	1157 aa		12.33	□□□□□ -0.44
HHO1	YPL127C	IRC3	Q06683	689 aa		12.33	□□□□□ -0.44
HHO1	YPL127C	MSP1	P28737	362 aa		12.32	□□□□□ -0.44
HHO1	YPL127C	DJP1	P40564	432 aa		12.32	□□□□□ -0.44
HHO1	YPL127C	PKH3	Q03306	898 aa	Predicted RBP	12.32	□□□□□ -0.44
HHO1	YPL127C	VPS20	Q04272	221 aa		12.31	□□□□□ -0.44
HHO1	YPL127C	GEF1	P37020	779 aa		12.3	□□□□□ -0.44
HHO1	YPL127C	NPA3	P47122	385 aa		12.3	□□□□□ -0.44
HHO1	YPL127C	CWH41	P53008	833 aa		12.3	□□□□□ -0.44
HHO1	YPL127C	TAH18	Q12181	623 aa		12.3	□□□□□ -0.44
HHO1	YPL127C	KRE2	P27809	442 aa		12.29	□□□□□ -0.44
HHO1	YPL127C	RPN1	P38764	993 aa	Known RBP	12.29	□□□□□ -0.44
HHO1	YPL127C	BDH2	P39713	417 aa		12.29	□□□□□ -0.44
HHO1	YPL127C	ENP2	P48234	707 aa	Known RBP	12.29	□□□□□ -0.44
HHO1	YPL127C	SAS4	Q04003	481 aa		12.29	□□□□□ -0.44
HHO1	YPL127C	CYB2	P00175	591 aa		12.28	□□□□□ -0.44
HHO1	YPL127C	SPL2	P38839	148 aa		12.28	□□□□□ -0.44
HHO1	YPL127C	HAP5	Q02516	242 aa		12.28	□□□□□ -0.44
HHO1	YPL127C	ERO1	Q03103	563 aa		12.28	□□□□□ -0.44
HHO1	YPL127C	KAR5	Q04746	504 aa		12.28	□□□□□ -0.44
HHO1	YPL127C	SSF2	Q12153	453 aa	Predicted RBP	12.28	□□□□□ -0.44
HHO1	YPL127C	LAM4	P38800	1345 aa		12.28	□□□□□ -0.44
HHO1	YPL127C	RPL19A	P0CX82	189 aa	Known RBP	12.27	□□□□□ -0.45
HHO1	YPL127C	RPL19B	P0CX83	189 aa	Predicted RBP	12.27	□□□□□ -0.45
HHO1	YPL127C	MET1	P36150	593 aa		12.27	□□□□□ -0.45
HHO1	YPL127C	YMR147W	P40218	223 aa	Known RBP	12.27	□□□□□ -0.45
HHO1	YPL127C	UBX2	Q04228	584 aa		12.27	□□□□□ -0.45
HHO1	YPL127C	COG8	Q04632	607 aa		12.27	□□□□□ -0.45
HHO1	YPL127C	BIK1	P11709	440 aa		12.26	□□□□□ -0.45
HHO1	YPL127C	LEO1	P38439	464 aa		12.26	□□□□□ -0.45
HHO1	YPL127C	IOC3	P43596	787 aa		12.26	□□□□□ -0.45
HHO1	YPL127C	RPT4	P53549	437 aa	Known RBP	12.26	□□□□□ -0.45
HHO1	YPL127C	INM2	Q05533	292 aa		12.26	□□□□□ -0.45
HHO1	YPL127C	PSF3	Q12146	194 aa		12.26	□□□□□ -0.45
HHO1	YPL127C	CAF20	P12962	161 aa	Known RBP	12.25	□□□□□ -0.45
HHO1	YPL127C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	12.25	□□□□□ -0.45	not detected
HHO1	YPL127C	ERT1	P38140	529 aa		12.25	□□□□□ -0.45
HHO1	YPL127C	CIC1	P38779	376 aa	Known RBP	12.25	□□□□□ -0.45
HHO1	YPL127C	HYR1	P40581	163 aa	Known RBP	12.25	□□□□□ -0.45
HHO1	YPL127C	HST1	P53685	503 aa		12.25	□□□□□ -0.45
HHO1	YPL127C	HRQ1	Q05549	1077 aa		12.25	□□□□□ -0.45
HHO1	YPL127C	PSK2	Q08217	1101 aa		12.25	□□□□□ -0.45
HHO1	YPL127C	LCB1	P25045	558 aa	Known RBP	12.24	□□□□□ -0.45
HHO1	YPL127C	PEP3	P27801	918 aa		12.24	□□□□□ -0.45
HHO1	YPL127C	ARL1	P38116	183 aa	Known RBP	12.24	□□□□□ -0.45
HHO1	YPL127C	IRC8	P47046	822 aa		12.24	□□□□□ -0.45
HHO1	YPL127C	TTI1	P36097	1038 aa		12.23	□□□□□ -0.45
HHO1	YPL127C	GRX7	P38068	203 aa		12.23	□□□□□ -0.45
HHO1	YPL127C	CRG1	P38892	291 aa	RIP-Chip data	12.23	□□□□□ -0.45	not detected
HHO1	YPL127C	IRC4	Q03036	179 aa		12.23	□□□□□ -0.45
HHO1	YPL127C	SMY1	P32364	656 aa	Known RBP	12.22	□□□□□ -0.45
HHO1	YPL127C	YKL222C	P35995	705 aa		12.22	□□□□□ -0.45
HHO1	YPL127C	ARP5	P53946	755 aa		12.22	□□□□□ -0.45
HHO1	YPL127C	YIR042C	P40586	236 aa		12.21	□□□□□ -0.45
HHO1	YPL127C	YFH7	P43591	353 aa		12.21	□□□□□ -0.45
HHO1	YPL127C	MSN5	P52918	1224 aa		12.21	□□□□□ -0.45
HHO1	YPL127C	SPN1	Q06505	410 aa	Predicted RBP	12.21	□□□□□ -0.45
HHO1	YPL127C	PPM2	Q08282	695 aa		12.21	□□□□□ -0.45
HHO1	YPL127C	PGA3	Q12746	312 aa	Known RBP	12.21	□□□□□ -0.45
HHO1	YPL127C	IMP2'	P32351	346 aa		12.2	□□□□□ -0.46
HHO1	YPL127C	FBP26	P32604	452 aa		12.2	□□□□□ -0.46
HHO1	YPL127C	YHL017W	P38745	532 aa		12.2	□□□□□ -0.46
HHO1	YPL127C	ECM23	Q02710	187 aa		12.2	□□□□□ -0.46
HHO1	YPL127C	ESF1	Q06344	628 aa	Known RBP	12.2	□□□□□ -0.46
HHO1	YPL127C	PMD1	P32634	1753 aa		12.2	□□□□□ -0.46
HHO1	YPL127C	MATALPHA2	P0CY08	210 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	HMLALPHA2	P0CY09	210 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	SIS2	P36024	562 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	BOI1	P38041	980 aa	Known RBP	12.19	□□□□□ -0.46
HHO1	YPL127C	VID28	P40547	921 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	CTF18	P49956	741 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	YKE2	P52553	114 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	PEX14	P53112	341 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	GRX6	Q12438	231 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	FIG2	P25653	1609 aa		12.19	□□□□□ -0.46
HHO1	YPL127C	COQ1	P18900	473 aa		12.18	□□□□□ -0.46
HHO1	YPL127C	PTK1	P36002	662 aa	Predicted RBP	12.18	□□□□□ -0.46
HHO1	YPL127C	SLN1	P39928	1220 aa	Predicted RBP	12.18	□□□□□ -0.46
HHO1	YPL127C	CIR1	P42940	261 aa		12.18	□□□□□ -0.46
HHO1	YPL127C	JJJ2	P46997	583 aa		12.18	□□□□□ -0.46
HHO1	YPL127C	ELG1	Q12050	791 aa		12.18	□□□□□ -0.46
HHO1	YPL127C	YPL150W	Q12152	901 aa		12.18	□□□□□ -0.46
HHO1	YPL127C	CTT1	P06115	562 aa		12.17	□□□□□ -0.46
HHO1	YPL127C	RET1	P22276	1149 aa	Known RBP	12.17	□□□□□ -0.46
HHO1	YPL127C	RRP8	P38961	392 aa	Known RBP	12.17	□□□□□ -0.46
HHO1	YPL127C	TSR3	Q12094	313 aa	Known RBP	12.17	□□□□□ -0.46
HHO1	YPL127C	WRS1	Q12109	432 aa	Known RBP	12.17	□□□□□ -0.46
HHO1	YPL127C	AIM44	Q99299	758 aa		12.17	□□□□□ -0.46
HHO1	YPL127C	KEX1	P09620	729 aa		12.16	□□□□□ -0.46
HHO1	YPL127C	ELM1	P32801	640 aa		12.16	□□□□□ -0.46
HHO1	YPL127C	PRX1	P34227	261 aa	Known RBP	12.16	□□□□□ -0.46
HHO1	YPL127C	RER2	P35196	286 aa		12.16	□□□□□ -0.46
HHO1	YPL127C	YGL081W	P53156	320 aa		12.16	□□□□□ -0.46

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms