RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C CRF1Q04930 467 aa9.73□□□□□ -0.85
LSP1YPL004C PSF3Q12146 194 aa9.73□□□□□ -0.85
LSP1YPL004C GAP1P19145 602 aaPredicted RBP9.72□□□□□ -0.85
LSP1YPL004C YGR117CP53270 476 aa9.72□□□□□ -0.85
LSP1YPL004C TOS4Q06266 489 aa9.72□□□□□ -0.85
LSP1YPL004C WRS1Q12109 432 aaKnown RBP9.72□□□□□ -0.85
LSP1YPL004C TFA1P36100 482 aa9.71□□□□□ -0.86
LSP1YPL004C HAL5P38970 855 aaKnown RBP9.71□□□□□ -0.86
LSP1YPL004C FET4P40988 552 aa9.71□□□□□ -0.86
LSP1YPL004C TIM50Q02776 476 aa9.71□□□□□ -0.86
LSP1YPL004C AI2P03876 854 aa9.7□□□□□ -0.86
LSP1YPL004C ARG82P07250 355 aa9.7□□□□□ -0.86
LSP1YPL004C SLA1P32790 1244 aa9.7□□□□□ -0.86
LSP1YPL004C GSM1P42950 618 aa9.7□□□□□ -0.86
LSP1YPL004C TRM44Q02648 567 aaKnown RBP9.7□□□□□ -0.86
LSP1YPL004C NCB2Q92317 146 aa9.7□□□□□ -0.86
LSP1YPL004C PIF1P07271 859 aa9.69□□□□□ -0.86
LSP1YPL004C FLO11P08640 1367 aa9.69□□□□□ -0.86
LSP1YPL004C JJJ2P46997 583 aa9.69□□□□□ -0.86
LSP1YPL004C YFH7P43591 353 aa9.68□□□□□ -0.86
LSP1YPL004C YGL242CP53066 181 aa9.68□□□□□ -0.86
LSP1YPL004C YNL193WP53870 558 aa9.68□□□□□ -0.86
LSP1YPL004C RPN7Q06103 429 aaKnown RBP9.68□□□□□ -0.86
LSP1YPL004C ACK1Q07622 623 aaPredicted RBP9.68□□□□□ -0.86
LSP1YPL004C STV1P37296 890 aa9.67□□□□□ -0.86
LSP1YPL004C NMD2P38798 1089 aaKnown RBP9.67□□□□□ -0.86
LSP1YPL004C EMP47P43555 445 aa9.67□□□□□ -0.86
LSP1YPL004C VPS4P52917 437 aa9.67□□□□□ -0.86
LSP1YPL004C GSC2P40989 1895 aa9.67□□□□□ -0.86
LSP1YPL004C KTR3P38130 404 aaPredicted RBP9.66□□□□□ -0.86
LSP1YPL004C YJL171CP46992 396 aa9.66□□□□□ -0.86
LSP1YPL004C RRI2Q12348 645 aa9.66□□□□□ -0.86
LSP1YPL004C HPR1P17629 752 aaKnown RBP9.65□□□□□ -0.86
LSP1YPL004C RPS7AP26786 190 aaKnown RBP9.65□□□□□ -0.86
LSP1YPL004C RPT3P33298 428 aaKnown RBP9.65□□□□□ -0.86
LSP1YPL004C UTP7P40055 554 aaKnown RBP9.65□□□□□ -0.86
LSP1YPL004C PEA2P40091 420 aa9.65□□□□□ -0.86
LSP1YPL004C MTC3P53077 123 aa9.65□□□□□ -0.86
LSP1YPL004C AIM7Q12156 149 aa9.65□□□□□ -0.86
LSP1YPL004C NOT3P06102 836 aaKnown RBP9.64□□□□□ -0.87
LSP1YPL004C FPR3P38911 411 aaKnown RBP9.64□□□□□ -0.87
LSP1YPL004C VHR2P40041 505 aa9.64□□□□□ -0.87
LSP1YPL004C MLC1P53141 149 aa9.64□□□□□ -0.87
LSP1YPL004C ALO1P54783 526 aaKnown RBP9.64□□□□□ -0.87
LSP1YPL004C INM2Q05533 292 aa9.64□□□□□ -0.87
LSP1YPL004C CDC16P09798 840 aa9.63□□□□□ -0.87
LSP1YPL004C SNF3P10870 884 aa9.63□□□□□ -0.87
LSP1YPL004C YIR042CP40586 236 aa9.63□□□□□ -0.87
LSP1YPL004C CYB2P00175 591 aa9.62□□□□□ -0.87
LSP1YPL004C PTK1P36002 662 aaPredicted RBP9.62□□□□□ -0.87
LSP1YPL004C ECM21P38167 1117 aaKnown RBP9.62□□□□□ -0.87
LSP1YPL004C BDP1P46678 594 aa9.62□□□□□ -0.87
LSP1YPL004C PUS6P53294 404 aa9.62□□□□□ -0.87
LSP1YPL004C YIL089WP40500 205 aa9.61□□□□□ -0.87
LSP1YPL004C SEN54Q02825 467 aaPredicted RBP9.61□□□□□ -0.87
LSP1YPL004C TYW1Q08960 810 aaKnown RBP9.61□□□□□ -0.87
LSP1YPL004C PDR18P53756 1333 aa9.6□□□□□ -0.87
LSP1YPL004C NPL4P33755 580 aa9.6□□□□□ -0.87
LSP1YPL004C APL6P46682 809 aa9.6□□□□□ -0.87
LSP1YPL004C CWC15Q03772 175 aaKnown RBP9.6□□□□□ -0.87
LSP1YPL004C CBP1P07252 654 aa9.59□□□□□ -0.87
LSP1YPL004C RFC1P38630 861 aaKnown RBP9.59□□□□□ -0.87
LSP1YPL004C EPS1P40557 701 aa9.59□□□□□ -0.87
LSP1YPL004C ECM16Q04217 1267 aaKnown RBP9.59□□□□□ -0.87
LSP1YPL004C TSR3Q12094 313 aaKnown RBP9.59□□□□□ -0.87
LSP1YPL004C GEF1P37020 779 aa9.58□□□□□ -0.88
LSP1YPL004C GRX7P38068 203 aa9.58□□□□□ -0.88
LSP1YPL004C MDL2P33311 773 aa9.57□□□□□ -0.88
LSP1YPL004C BOI1P38041 980 aaKnown RBP9.57□□□□□ -0.88
LSP1YPL004C NIT1P40447 199 aa9.57□□□□□ -0.88
LSP1YPL004C MRPS35P53292 345 aa9.57□□□□□ -0.88
LSP1YPL004C RPL17AP05740 184 aaKnown RBP9.56□□□□□ -0.88
LSP1YPL004C NOP2P40991 618 aaKnown RBP9.56□□□□□ -0.88
LSP1YPL004C RPL17BP46990 184 aaKnown RBP9.56□□□□□ -0.88
LSP1YPL004C PIB2P53191 635 aa9.56□□□□□ -0.88
LSP1YPL004C NKP2Q06162 153 aa9.56□□□□□ -0.88
LSP1YPL004C BRE1Q07457 700 aaKnown RBP9.56□□□□□ -0.88
LSP1YPL004C FLO1P32768 1537 aa9.56□□□□□ -0.88
LSP1YPL004C OSH3P38713 996 aaKnown RBP9.55□□□□□ -0.88
LSP1YPL004C NSG2P53898 299 aa9.55□□□□□ -0.88
LSP1YPL004C CSR2Q12734 1121 aa9.55□□□□□ -0.88
LSP1YPL004C KTR1P27810 393 aaKnown RBP9.54□□□□□ -0.88
LSP1YPL004C ETP1P38748 585 aaKnown RBP9.54□□□□□ -0.88
LSP1YPL004C IOC3P43596 787 aa9.54□□□□□ -0.88
LSP1YPL004C RRT6P53117 311 aaPredicted RBP9.54□□□□□ -0.88
LSP1YPL004C KAR5Q04746 504 aa9.54□□□□□ -0.88
LSP1YPL004C PCL8Q08966 492 aa9.54□□□□□ -0.88
LSP1YPL004C GAL2P13181 574 aa9.53□□□□□ -0.88
LSP1YPL004C RAD53P22216 821 aa9.53□□□□□ -0.88
LSP1YPL004C PBY1P38254 753 aa9.53□□□□□ -0.88
LSP1YPL004C PNT1P38969 423 aa9.53□□□□□ -0.88
LSP1YPL004C RRD1P40454 393 aaKnown RBP9.53□□□□□ -0.88
LSP1YPL004C BBC1P47068 1157 aa9.53□□□□□ -0.88
LSP1YPL004C PIP2P52960 996 aa9.53□□□□□ -0.88
LSP1YPL004C PKH3Q03306 898 aaPredicted RBP9.53□□□□□ -0.88
LSP1YPL004C RMD1Q03441 430 aa9.53□□□□□ -0.88
LSP1YPL004C IRC8P47046 822 aa9.52□□□□□ -0.89
LSP1YPL004C RAD50P12753 1312 aa9.52□□□□□ -0.89
LSP1YPL004C OPI1P21957 404 aa9.51□□□□□ -0.89
LSP1YPL004C ADP1P25371 1049 aa9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms