RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRT8	YOL048C	ADR1	P07248	1323 aa		10.4	□□□□□ -0.74
RRT8	YOL048C	MRPS35	P53292	345 aa		10.4	□□□□□ -0.74
RRT8	YOL048C	RPT4	P53549	437 aa	Known RBP	10.4	□□□□□ -0.74
RRT8	YOL048C	ERO1	Q03103	563 aa		10.4	□□□□□ -0.74
RRT8	YOL048C	POM152	P39685	1337 aa		10.39	□□□□□ -0.75
RRT8	YOL048C	STM1	P39015	273 aa	Known RBP	10.39	□□□□□ -0.75
RRT8	YOL048C	KTR1	P27810	393 aa	Known RBP	10.38	□□□□□ -0.75
RRT8	YOL048C	HXT13	P39924	564 aa		10.38	□□□□□ -0.75
RRT8	YOL048C	PIB2	P53191	635 aa		10.38	□□□□□ -0.75
RRT8	YOL048C	HXT17	P53631	564 aa		10.38	□□□□□ -0.75
RRT8	YOL048C	RIM20	Q12033	661 aa		10.38	□□□□□ -0.75
RRT8	YOL048C	CTT1	P06115	562 aa		10.37	□□□□□ -0.75
RRT8	YOL048C	ERT1	P38140	529 aa		10.37	□□□□□ -0.75
RRT8	YOL048C	NUG1	P40010	520 aa	Known RBP	10.37	□□□□□ -0.75
RRT8	YOL048C	KRI1	P42846	591 aa	Known RBP	10.37	□□□□□ -0.75
RRT8	YOL048C	RSM7	P47150	247 aa		10.37	□□□□□ -0.75
RRT8	YOL048C	PIF1	P07271	859 aa		10.36	□□□□□ -0.75
RRT8	YOL048C	KRE2	P27809	442 aa		10.36	□□□□□ -0.75
RRT8	YOL048C	SPL2	P38839	148 aa		10.36	□□□□□ -0.75
RRT8	YOL048C	RLF2	Q12495	606 aa		10.36	□□□□□ -0.75
RRT8	YOL048C	HAL5	P38970	855 aa	Known RBP	10.35	□□□□□ -0.75
RRT8	YOL048C	YER156C	P40093	338 aa	Known RBP	10.35	□□□□□ -0.75
RRT8	YOL048C	YMR147W	P40218	223 aa	Known RBP	10.35	□□□□□ -0.75
RRT8	YOL048C	EPS1	P40557	701 aa		10.35	□□□□□ -0.75
RRT8	YOL048C	YIR042C	P40586	236 aa		10.35	□□□□□ -0.75
RRT8	YOL048C	IRC4	Q03036	179 aa		10.35	□□□□□ -0.75
RRT8	YOL048C	INM2	Q05533	292 aa		10.35	□□□□□ -0.75
RRT8	YOL048C	GRX6	Q12438	231 aa		10.35	□□□□□ -0.75
RRT8	YOL048C	TOP1	P04786	769 aa		10.34	□□□□□ -0.75
RRT8	YOL048C	ICL1	P28240	557 aa	Predicted RBP	10.34	□□□□□ -0.75
RRT8	YOL048C	SLX5	P32828	619 aa	Known RBP	10.34	□□□□□ -0.75
RRT8	YOL048C	YIR014W	P40570	242 aa		10.34	□□□□□ -0.75
RRT8	YOL048C	GSM1	P42950	618 aa		10.34	□□□□□ -0.75
RRT8	YOL048C	ENP2	P48234	707 aa	Known RBP	10.34	□□□□□ -0.75
RRT8	YOL048C	RET1	P22276	1149 aa	Known RBP	10.33	□□□□□ -0.76
RRT8	YOL048C	RPT3	P33298	428 aa	Known RBP	10.33	□□□□□ -0.76
RRT8	YOL048C	AAP1	P37898	856 aa	Known RBP	10.33	□□□□□ -0.76
RRT8	YOL048C	OSH3	P38713	996 aa	Known RBP	10.33	□□□□□ -0.76
RRT8	YOL048C	UBX2	Q04228	584 aa		10.33	□□□□□ -0.76
RRT8	YOL048C	YKU70	P32807	602 aa		10.32	□□□□□ -0.76
RRT8	YOL048C	GLO3	P38682	493 aa	Known RBP	10.32	□□□□□ -0.76
RRT8	YOL048C	TIF4632	P39936	914 aa	Known RBP	10.32	□□□□□ -0.76
RRT8	YOL048C	KIN4	Q01919	800 aa		10.32	□□□□□ -0.76
RRT8	YOL048C	TPM1	P17536	199 aa	Known RBP	10.31	□□□□□ -0.76
RRT8	YOL048C	LCB1	P25045	558 aa	Known RBP	10.31	□□□□□ -0.76
RRT8	YOL048C	JJJ2	P46997	583 aa		10.31	□□□□□ -0.76
RRT8	YOL048C	MDL2	P33311	773 aa		10.3	□□□□□ -0.76
RRT8	YOL048C	PTK1	P36002	662 aa	Predicted RBP	10.3	□□□□□ -0.76
RRT8	YOL048C	SET4	P42948	560 aa		10.29	□□□□□ -0.76
RRT8	YOL048C	YFH7	P43591	353 aa		10.29	□□□□□ -0.76
RRT8	YOL048C	TOS4	Q06266	489 aa		10.29	□□□□□ -0.76
RRT8	YOL048C	PCT1	P13259	424 aa		10.28	□□□□□ -0.76
RRT8	YOL048C	OPI1	P21957	404 aa		10.28	□□□□□ -0.76
RRT8	YOL048C	GRX7	P38068	203 aa		10.28	□□□□□ -0.76
RRT8	YOL048C	OPY1	P38271	328 aa		10.28	□□□□□ -0.76
RRT8	YOL048C	IRC8	P47046	822 aa		10.28	□□□□□ -0.76
RRT8	YOL048C	PSF3	Q12146	194 aa		10.28	□□□□□ -0.76
RRT8	YOL048C	PMD1	P32634	1753 aa		10.28	□□□□□ -0.76
RRT8	YOL048C	RNR2	P09938	399 aa	Known RBP	10.27	□□□□□ -0.77
RRT8	YOL048C	BOI1	P38041	980 aa	Known RBP	10.27	□□□□□ -0.77
RRT8	YOL048C	SSP1	P38871	571 aa		10.27	□□□□□ -0.77
RRT8	YOL048C	RRP8	P38961	392 aa	Known RBP	10.27	□□□□□ -0.77
RRT8	YOL048C	TAH18	Q12181	623 aa		10.27	□□□□□ -0.77
RRT8	YOL048C	SRS2	P12954	1174 aa		10.26	□□□□□ -0.77
RRT8	YOL048C	CIC1	P38779	376 aa	Known RBP	10.26	□□□□□ -0.77
RRT8	YOL048C	BBC1	P47068	1157 aa		10.26	□□□□□ -0.77
RRT8	YOL048C	PRP42	Q03776	544 aa	Known RBP	10.26	□□□□□ -0.77
RRT8	YOL048C	GAS5	Q08193	484 aa		10.26	□□□□□ -0.77
RRT8	YOL048C	RRG1	Q12167	365 aa	Predicted RBP	10.26	□□□□□ -0.77
RRT8	YOL048C	PGA3	Q12746	312 aa	Known RBP	10.26	□□□□□ -0.77
RRT8	YOL048C	CYB2	P00175	591 aa		10.25	□□□□□ -0.77
RRT8	YOL048C	TRL1	P09880	827 aa	Known RBP	10.25	□□□□□ -0.77
RRT8	YOL048C	DPL1	Q05567	589 aa		10.25	□□□□□ -0.77
RRT8	YOL048C	ESF1	Q06344	628 aa	Known RBP	10.25	□□□□□ -0.77
RRT8	YOL048C	WRS1	Q12109	432 aa	Known RBP	10.25	□□□□□ -0.77
RRT8	YOL048C	IMP2'	P32351	346 aa		10.24	□□□□□ -0.77
RRT8	YOL048C	MET1	P36150	593 aa		10.24	□□□□□ -0.77
RRT8	YOL048C	SLN1	P39928	1220 aa	Predicted RBP	10.24	□□□□□ -0.77
RRT8	YOL048C	SQS1	P53866	767 aa	Known RBP	10.24	□□□□□ -0.77
RRT8	YOL048C	ARP5	P53946	755 aa		10.24	□□□□□ -0.77
RRT8	YOL048C	SEN54	Q02825	467 aa	Predicted RBP	10.24	□□□□□ -0.77
RRT8	YOL048C	PKH3	Q03306	898 aa	Predicted RBP	10.24	□□□□□ -0.77
RRT8	YOL048C	KAR5	Q04746	504 aa		10.24	□□□□□ -0.77
RRT8	YOL048C	LAM4	P38800	1345 aa		10.24	□□□□□ -0.77
RRT8	YOL048C	IOC3	P43596	787 aa		10.23	□□□□□ -0.77
RRT8	YOL048C	PIP2	P52960	996 aa		10.23	□□□□□ -0.77
RRT8	YOL048C	ARG82	P07250	355 aa		10.22	□□□□□ -0.77
RRT8	YOL048C	AFG2	P32794	780 aa		10.22	□□□□□ -0.77
RRT8	YOL048C	SIS2	P36024	562 aa		10.22	□□□□□ -0.77
RRT8	YOL048C	SHC1	P39000	512 aa		10.22	□□□□□ -0.77
RRT8	YOL048C	PUS6	P53294	404 aa		10.22	□□□□□ -0.77
RRT8	YOL048C	EAF7	P53911	425 aa	Known RBP	10.22	□□□□□ -0.77
RRT8	YOL048C	SSF2	Q12153	453 aa	Predicted RBP	10.22	□□□□□ -0.77
RRT8	YOL048C	COQ1	P18900	473 aa		10.21	□□□□□ -0.77
RRT8	YOL048C	RPS7A	P26786	190 aa	Known RBP	10.21	□□□□□ -0.77
RRT8	YOL048C	IME2	P32581	645 aa		10.21	□□□□□ -0.77
RRT8	YOL048C	NPL4	P33755	580 aa		10.21	□□□□□ -0.77
RRT8	YOL048C	GEF1	P37020	779 aa		10.21	□□□□□ -0.77
RRT8	YOL048C	AIM9	P40053	627 aa	Known RBP	10.21	□□□□□ -0.77
RRT8	YOL048C	TGL3	P40308	642 aa		10.21	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 56.3 ms