RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK2YNR031C GRX1P25373 110 aaKnown RBP1.9□□□□□ -2.11
SSK2YNR031C MDG1P53885 366 aa1.9□□□□□ -2.11
SSK2YNR031C SWE1P32944 819 aa1.89□□□□□ -2.11
SSK2YNR031C PTC4P38089 393 aa1.89□□□□□ -2.11
SSK2YNR031C RSC8P43609 557 aaKnown RBP1.89□□□□□ -2.11
SSK2YNR031C CRF1Q04930 467 aa1.89□□□□□ -2.11
SSK2YNR031C NOP7P53261 605 aaKnown RBP1.89□□□□□ -2.11
SSK2YNR031C EAF1Q06337 982 aa1.89□□□□□ -2.11
SSK2YNR031C RIX7Q07844 837 aaKnown RBP1.89□□□□□ -2.11
SSK2YNR031C CAF20P12962 161 aaKnown RBP1.89□□□□□ -2.11
SSK2YNR031C FAR11P53917 953 aa1.89□□□□□ -2.11
SSK2YNR031C SLM3Q12093 417 aa1.89□□□□□ -2.11
SSK2YNR031C UTP20P35194 2493 aaKnown RBP1.89□□□□□ -2.11
SSK2YNR031C SEN1Q00416 2231 aaKnown RBP1.89□□□□□ -2.11
SSK2YNR031C DRE2P36152 348 aa1.89□□□□□ -2.11
SSK2YNR031C ESL2P36168 1195 aa1.89□□□□□ -2.11
SSK2YNR031C ICL2Q12031 575 aa1.89□□□□□ -2.11
SSK2YNR031C SMY1P32364 656 aaKnown RBP1.88□□□□□ -2.11
SSK2YNR031C PDR3P33200 976 aa1.88□□□□□ -2.11
SSK2YNR031C HUL4P40985 892 aa1.88□□□□□ -2.11
SSK2YNR031C ECM23Q02710 187 aa1.88□□□□□ -2.11
SSK2YNR031C YLR271WQ06152 274 aa1.88□□□□□ -2.11
SSK2YNR031C MAK21Q12176 1025 aaKnown RBP1.88□□□□□ -2.11
SSK2YNR031C YLR422WQ06409 1932 aa1.88□□□□□ -2.11
SSK2YNR031C RPP2AP05319 106 aaKnown RBP1.88□□□□□ -2.11
SSK2YNR031C RAM1P22007 431 aa1.88□□□□□ -2.11
SSK2YNR031C YJL007CP47080 104 aa1.88□□□□□ -2.11
SSK2YNR031C ENT3P47160 408 aa1.88□□□□□ -2.11
SSK2YNR031C GRX3Q03835 250 aa1.88□□□□□ -2.11
SSK2YNR031C TY3A-GQ12173 290 aa1.88□□□□□ -2.11
SSK2YNR031C TY3A-IQ99219 290 aa1.88□□□□□ -2.11
SSK2YNR031C PDR18P53756 1333 aa1.88□□□□□ -2.11
SSK2YNR031C BOI1P38041 980 aaKnown RBP1.88□□□□□ -2.11
SSK2YNR031C ISW1P38144 1129 aa1.88□□□□□ -2.11
SSK2YNR031C VNX1P42839 908 aa1.88□□□□□ -2.11
SSK2YNR031C AI2P03876 854 aa1.87□□□□□ -2.11
SSK2YNR031C UIP5P36137 443 aa1.87□□□□□ -2.11
SSK2YNR031C SFB3P38810 929 aa1.87□□□□□ -2.11
SSK2YNR031C YJL171CP46992 396 aa1.87□□□□□ -2.11
SSK2YNR031C PUF4P25339 888 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SSK2YNR031C NAB3P38996 802 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SSK2YNR031C RAD26P40352 1085 aa1.87□□□□□ -2.11
SSK2YNR031C MTR4P47047 1073 aaKnown RBP1.87□□□□□ -2.11
SSK2YNR031C TPO2P53283 614 aa1.87□□□□□ -2.11
SSK2YNR031C DIB1Q06819 143 aaPredicted RBP1.87□□□□□ -2.11
SSK2YNR031C CLB5P30283 435 aa1.87□□□□□ -2.11
SSK2YNR031C DEF1P35732 738 aaKnown RBP1.86□□□□□ -2.11
SSK2YNR031C GAL2P13181 574 aa1.86□□□□□ -2.11
SSK2YNR031C ATG1P53104 897 aa1.86□□□□□ -2.11
SSK2YNR031C SUP35P05453 685 aaKnown RBP1.86□□□□□ -2.11
SSK2YNR031C TRM44Q02648 567 aaKnown RBP1.86□□□□□ -2.11
SSK2YNR031C SEN54Q02825 467 aaPredicted RBP1.86□□□□□ -2.11
SSK2YNR031C HEM1P09950 548 aaPredicted RBP1.86□□□□□ -2.11
SSK2YNR031C IDI1P15496 288 aa1.86□□□□□ -2.11
SSK2YNR031C SIT4P20604 311 aa1.86□□□□□ -2.11
SSK2YNR031C TOM1Q03280 3268 aa1.86□□□□□ -2.11
SSK2YNR031C SCJ1P25303 377 aa1.85□□□□□ -2.11
SSK2YNR031C XKS1P42826 600 aa1.85□□□□□ -2.11
SSK2YNR031C YGR266WP53326 701 aa1.85□□□□□ -2.11
SSK2YNR031C TAF13P11747 167 aa1.85□□□□□ -2.11
SSK2YNR031C SYN8P31377 255 aa1.85□□□□□ -2.11
SSK2YNR031C PES4P39684 611 aa1.85□□□□□ -2.11
SSK2YNR031C SSL1Q04673 461 aaPredicted RBP1.85□□□□□ -2.11
SSK2YNR031C ERG7P38604 731 aa1.85□□□□□ -2.11
SSK2YNR031C CHS7P38843 316 aa1.85□□□□□ -2.11
SSK2YNR031C JHD1P40034 492 aa1.85□□□□□ -2.11
SSK2YNR031C RSM7P47150 247 aa1.85□□□□□ -2.11
SSK2YNR031C DPL1Q05567 589 aa1.85□□□□□ -2.11
SSK2YNR031C YOR131CQ12486 218 aa1.85□□□□□ -2.11
SSK2YNR031C YER158CP40095 573 aa1.85□□□□□ -2.11
SSK2YNR031C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
SSK2YNR031C MDM20Q12387 796 aaKnown RBP1.85□□□□□ -2.11
SSK2YNR031C AIM44Q99299 758 aa1.85□□□□□ -2.11
SSK2YNR031C RPP1BP10622 106 aaKnown RBP1.84□□□□□ -2.11
SSK2YNR031C DAL5P15365 543 aa1.84□□□□□ -2.11
SSK2YNR031C POL3P15436 1097 aa1.84□□□□□ -2.11
SSK2YNR031C HPR1P17629 752 aaKnown RBP1.84□□□□□ -2.11
SSK2YNR031C SPT5P27692 1063 aaKnown RBP1.84□□□□□ -2.11
SSK2YNR031C WSC3Q12215 556 aa1.84□□□□□ -2.11
SSK2YNR031C MIC60P36112 540 aa1.84□□□□□ -2.11
SSK2YNR031C GRS1P38088 690 aaKnown RBP1.84□□□□□ -2.11
SSK2YNR031C RCR1P38212 213 aa1.84□□□□□ -2.11
SSK2YNR031C SUB1P54000 292 aaKnown RBP1.84□□□□□ -2.11
SSK2YNR031C NOP8Q08287 484 aaPredicted RBP1.84□□□□□ -2.11
SSK2YNR031C AIR2Q12476 344 aaKnown RBP1.84□□□□□ -2.11
SSK2YNR031C RPS9AO13516 197 aaKnown RBP1.84□□□□□ -2.12
SSK2YNR031C QCR6P00127 147 aa1.84□□□□□ -2.12
SSK2YNR031C GEF1P37020 779 aa1.84□□□□□ -2.12
SSK2YNR031C TRP2P00899 507 aaKnown RBP1.83□□□□□ -2.12
SSK2YNR031C HIP1P06775 603 aa1.83□□□□□ -2.12
SSK2YNR031C GCD7P32502 381 aaPredicted RBP1.83□□□□□ -2.12
SSK2YNR031C GRX4P32642 244 aa1.83□□□□□ -2.12
SSK2YNR031C PNT1P38969 423 aa1.83□□□□□ -2.12
SSK2YNR031C YDR306CQ06640 478 aa1.83□□□□□ -2.12
SSK2YNR031C IRC10Q08118 586 aa1.83□□□□□ -2.12
SSK2YNR031C YOR238WQ08634 303 aa1.83□□□□□ -2.12
SSK2YNR031C TPS3P38426 1054 aaKnown RBP1.83□□□□□ -2.12
SSK2YNR031C GIN4Q12263 1142 aa1.83□□□□□ -2.12
SSK2YNR031C RPP2BP02400 110 aaKnown RBP1.83□□□□□ -2.12
SSK2YNR031C SPT2P06843 333 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms