RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C CPA2P03965 1118 aaKnown RBP9.95□□□□□ -0.82
RPD3YNL330C OPI1P21957 404 aa9.95□□□□□ -0.82
RPD3YNL330C GRX1P25373 110 aaKnown RBP9.95□□□□□ -0.82
RPD3YNL330C SLA1P32790 1244 aa9.95□□□□□ -0.82
RPD3YNL330C LEO1P38439 464 aa9.95□□□□□ -0.82
RPD3YNL330C NPR3P38742 1146 aa9.95□□□□□ -0.82
RPD3YNL330C YHL017WP38745 532 aa9.95□□□□□ -0.82
RPD3YNL330C EPS1P40557 701 aa9.95□□□□□ -0.82
RPD3YNL330C ENV9Q08651 330 aa9.95□□□□□ -0.82
RPD3YNL330C CYC8P14922 966 aa9.94□□□□□ -0.82
RPD3YNL330C FRS2P15625 503 aaKnown RBP9.94□□□□□ -0.82
RPD3YNL330C YGL015CP33199 130 aa9.94□□□□□ -0.82
RPD3YNL330C FCP1Q03254 732 aa9.94□□□□□ -0.82
RPD3YNL330C DDP1Q99321 188 aaKnown RBP9.94□□□□□ -0.82
RPD3YNL330C SEC18P18759 758 aaKnown RBP9.93□□□□□ -0.82
RPD3YNL330C MBR1P23493 339 aa9.93□□□□□ -0.82
RPD3YNL330C CIC1P38779 376 aaKnown RBP9.93□□□□□ -0.82
RPD3YNL330C TPM2P40414 161 aa9.93□□□□□ -0.82
RPD3YNL330C YKE2P52553 114 aa9.93□□□□□ -0.82
RPD3YNL330C RDS1P25611 832 aa9.92□□□□□ -0.82
RPD3YNL330C VID28P40547 921 aa9.92□□□□□ -0.82
RPD3YNL330C STU2P46675 888 aa9.92□□□□□ -0.82
RPD3YNL330C DCD1P06773 312 aa9.91□□□□□ -0.82
RPD3YNL330C MATALPHA2P0CY08 210 aa9.91□□□□□ -0.82
RPD3YNL330C HMLALPHA2P0CY09 210 aa9.91□□□□□ -0.82
RPD3YNL330C SIS2P36024 562 aa9.91□□□□□ -0.82
RPD3YNL330C MAL33P38157 468 aa9.91□□□□□ -0.82
RPD3YNL330C ENT3P47160 408 aa9.91□□□□□ -0.82
RPD3YNL330C TRS33Q99394 268 aa9.91□□□□□ -0.82
RPD3YNL330C SAC3P46674 1301 aa9.91□□□□□ -0.82
RPD3YNL330C AI2P03876 854 aa9.9□□□□□ -0.82
RPD3YNL330C ATE1P16639 503 aa9.9□□□□□ -0.82
RPD3YNL330C PEP3P27801 918 aa9.9□□□□□ -0.82
RPD3YNL330C FBP26P32604 452 aa9.9□□□□□ -0.82
RPD3YNL330C SGD1Q06132 899 aa9.9□□□□□ -0.82
RPD3YNL330C PGA3Q12746 312 aaKnown RBP9.9□□□□□ -0.82
RPD3YNL330C BUD6P41697 788 aa9.89□□□□□ -0.83
RPD3YNL330C YGL082WP53155 381 aa9.89□□□□□ -0.83
RPD3YNL330C UBP16Q02863 499 aa9.89□□□□□ -0.83
RPD3YNL330C RPN7Q06103 429 aaKnown RBP9.89□□□□□ -0.83
RPD3YNL330C ESF1Q06344 628 aaKnown RBP9.89□□□□□ -0.83
RPD3YNL330C COBP00163 385 aa9.88□□□□□ -0.83
RPD3YNL330C SES1P07284 462 aaKnown RBP9.88□□□□□ -0.83
RPD3YNL330C RFC5P38251 354 aa9.88□□□□□ -0.83
RPD3YNL330C YNL193WP53870 558 aa9.88□□□□□ -0.83
RPD3YNL330C TIM50Q02776 476 aa9.88□□□□□ -0.83
RPD3YNL330C HOS3Q02959 697 aaKnown RBP9.88□□□□□ -0.83
RPD3YNL330C SER1P33330 395 aaKnown RBP9.87□□□□□ -0.83
RPD3YNL330C CDC27P38042 758 aa9.87□□□□□ -0.83
RPD3YNL330C RRM3P38766 723 aa9.87□□□□□ -0.83
RPD3YNL330C BBC1P47068 1157 aa9.87□□□□□ -0.83
RPD3YNL330C SSL2Q00578 843 aa9.87□□□□□ -0.83
RPD3YNL330C IMH1Q06704 911 aaKnown RBP9.87□□□□□ -0.83
RPD3YNL330C SSF2Q12153 453 aaPredicted RBP9.87□□□□□ -0.83
RPD3YNL330C PIF1P07271 859 aa9.86□□□□□ -0.83
RPD3YNL330C IMP2'P32351 346 aa9.86□□□□□ -0.83
RPD3YNL330C SKI2P35207 1287 aaKnown RBP RIP-Chip data9.86□□□□□ -0.83not detected
RPD3YNL330C RPN1P38764 993 aaKnown RBP9.86□□□□□ -0.83
RPD3YNL330C ENP2P48234 707 aaKnown RBP9.86□□□□□ -0.83
RPD3YNL330C YPT11P48559 417 aa9.86□□□□□ -0.83
RPD3YNL330C UBP10P53874 792 aaPredicted RBP9.86□□□□□ -0.83
RPD3YNL330C YLR407WQ06070 228 aa9.86□□□□□ -0.83
RPD3YNL330C RRI2Q12348 645 aa9.86□□□□□ -0.83
RPD3YNL330C ADR1P07248 1323 aa9.86□□□□□ -0.83
RPD3YNL330C GPA1P08539 472 aa9.85□□□□□ -0.83
RPD3YNL330C PGI1P12709 554 aaKnown RBP9.85□□□□□ -0.83
RPD3YNL330C MET1P36150 593 aa9.85□□□□□ -0.83
RPD3YNL330C RFT1P38206 574 aaPredicted RBP9.85□□□□□ -0.83
RPD3YNL330C YER130CP39959 443 aa9.85□□□□□ -0.83
RPD3YNL330C TFG2P41896 400 aaPredicted RBP9.85□□□□□ -0.83
RPD3YNL330C ECM23Q02710 187 aa9.85□□□□□ -0.83
RPD3YNL330C PKH3Q03306 898 aaPredicted RBP9.85□□□□□ -0.83
RPD3YNL330C YAH1Q12184 172 aaKnown RBP9.85□□□□□ -0.83
RPD3YNL330C RIM15P43565 1770 aa9.85□□□□□ -0.83
RPD3YNL330C QCR6P00127 147 aa9.84□□□□□ -0.83
RPD3YNL330C TCD1P38756 429 aa9.84□□□□□ -0.83
RPD3YNL330C APP1P53933 587 aa9.84□□□□□ -0.83
RPD3YNL330C TAH18Q12181 623 aa9.84□□□□□ -0.83
RPD3YNL330C LAM4P38800 1345 aa9.84□□□□□ -0.83
RPD3YNL330C YKT6P36015 200 aaKnown RBP9.83□□□□□ -0.84
RPD3YNL330C YKR075CP36155 307 aa9.83□□□□□ -0.84
RPD3YNL330C YMR147WP40218 223 aaKnown RBP9.83□□□□□ -0.84
RPD3YNL330C DOT5P40553 215 aa9.83□□□□□ -0.84
RPD3YNL330C FOX2Q02207 900 aaKnown RBP9.83□□□□□ -0.84
RPD3YNL330C TFC8Q12308 588 aa9.83□□□□□ -0.84
RPD3YNL330C HAT1Q12341 374 aa9.83□□□□□ -0.84
RPD3YNL330C UTP10P42945 1769 aaKnown RBP9.83□□□□□ -0.84
RPD3YNL330C MPH3P0CE00 602 aa9.82□□□□□ -0.84
RPD3YNL330C MFT1P33441 392 aaKnown RBP9.82□□□□□ -0.84
RPD3YNL330C CRG1P38892 291 aaRIP-Chip data9.82□□□□□ -0.84 RIP-Chip
RPD3YNL330C LAM6Q08001 693 aa9.82□□□□□ -0.84
RPD3YNL330C POM152P39685 1337 aa9.82□□□□□ -0.84
RPD3YNL330C SPN1Q06505 410 aaPredicted RBP9.82□□□□□ -0.84
RPD3YNL330C GSY2P27472 705 aa9.81□□□□□ -0.84
RPD3YNL330C SPC110P32380 944 aa9.81□□□□□ -0.84
RPD3YNL330C CEP3P40969 608 aa9.81□□□□□ -0.84
RPD3YNL330C FAR11P53917 953 aa9.81□□□□□ -0.84
RPD3YNL330C VMS1Q04311 632 aaKnown RBP9.81□□□□□ -0.84
RPD3YNL330C NYV1Q12255 253 aa9.81□□□□□ -0.84
RPD3YNL330C MSB4Q12317 492 aa9.81□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms