RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C YPL191CQ08930 360 aa3.75□□□□□ -1.81
SQS1YNL224C SLP1Q12232 587 aa3.75□□□□□ -1.81
SQS1YNL224C RRP36Q12481 300 aaPredicted RBP3.75□□□□□ -1.81
SQS1YNL224C TUF1P02992 437 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C STE11P23561 717 aa3.75□□□□□ -1.81
SQS1YNL224C ILV3P39522 585 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C IRR1P40541 1150 aa3.75□□□□□ -1.81
SQS1YNL224C IOC3P43596 787 aa3.75□□□□□ -1.81
SQS1YNL224C DAS1P47005 663 aa3.75□□□□□ -1.81
SQS1YNL224C CCM1P48237 864 aaPredicted RBP3.75□□□□□ -1.81
SQS1YNL224C YGR016WP53209 190 aa3.75□□□□□ -1.81
SQS1YNL224C ALG12P53730 551 aa3.75□□□□□ -1.81
SQS1YNL224C YNL247WP53852 767 aaKnown RBP3.75□□□□□ -1.81
SQS1YNL224C RPN4Q03465 531 aa3.75□□□□□ -1.81
SQS1YNL224C ORM2Q06144 216 aa3.75□□□□□ -1.81
SQS1YNL224C YPR097WQ06839 1073 aa3.75□□□□□ -1.81
SQS1YNL224C YDL073WQ07454 984 aa3.75□□□□□ -1.81
SQS1YNL224C YIL002W-AQ3E7Z5 69 aa3.75□□□□□ -1.81
SQS1YNL224C LSO1Q3E827 93 aa3.75□□□□□ -1.81
SQS1YNL224C NAT1P12945 854 aaKnown RBP3.74□□□□□ -1.81
SQS1YNL224C RIM101P33400 625 aa3.74□□□□□ -1.81
SQS1YNL224C TIM54P47045 478 aa3.74□□□□□ -1.81
SQS1YNL224C GRC3Q07845 632 aa3.74□□□□□ -1.81
SQS1YNL224C BRR1Q99177 341 aaPredicted RBP3.74□□□□□ -1.81
SQS1YNL224C AAD3P25612 363 aa3.73□□□□□ -1.81
SQS1YNL224C SWC3P31376 625 aa3.73□□□□□ -1.81
SQS1YNL224C SLD2P34252 453 aa3.73□□□□□ -1.81
SQS1YNL224C RRF1P38771 230 aa3.73□□□□□ -1.81
SQS1YNL224C APE4P38821 490 aa3.73□□□□□ -1.81
SQS1YNL224C FMP10P40098 244 aa3.73□□□□□ -1.81
SQS1YNL224C SMC3P47037 1230 aa3.73□□□□□ -1.81
SQS1YNL224C NNF1P47149 201 aa3.73□□□□□ -1.81
SQS1YNL224C RSC1P53236 928 aa3.73□□□□□ -1.81
SQS1YNL224C SPP382Q06411 708 aaPredicted RBP3.73□□□□□ -1.81
SQS1YNL224C YOL098CQ12496 1037 aa3.73□□□□□ -1.81
SQS1YNL224C ATE1P16639 503 aa3.73□□□□□ -1.81
SQS1YNL224C HNM1P19807 563 aa3.73□□□□□ -1.81
SQS1YNL224C MED8P38304 223 aa3.73□□□□□ -1.81
SQS1YNL224C RRP8P38961 392 aaKnown RBP3.73□□□□□ -1.81
SQS1YNL224C MXR1P40029 184 aa3.73□□□□□ -1.81
SQS1YNL224C IES5P40060 125 aa3.73□□□□□ -1.81
SQS1YNL224C ACF4P47129 309 aa3.73□□□□□ -1.81
SQS1YNL224C YGR153WP48238 217 aa3.73□□□□□ -1.81
SQS1YNL224C ITC1P53125 1264 aa3.73□□□□□ -1.81
SQS1YNL224C BTN2P53286 410 aa3.73□□□□□ -1.81
SQS1YNL224C RTC4P53850 401 aa3.73□□□□□ -1.81
SQS1YNL224C CST9Q06032 482 aa3.73□□□□□ -1.81
SQS1YNL224C YAH1Q12184 172 aaKnown RBP3.73□□□□□ -1.81
SQS1YNL224C FAR1P21268 830 aa3.72□□□□□ -1.81
SQS1YNL224C PSO2P30620 661 aa3.72□□□□□ -1.81
SQS1YNL224C UTP18P40362 594 aaPredicted RBP3.72□□□□□ -1.81
SQS1YNL224C BUD27P43573 796 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SQS1YNL224C SET2P46995 733 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C RIM21P48565 533 aa3.72□□□□□ -1.81
SQS1YNL224C NUP42P49686 430 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C HOP2P53187 214 aa3.72□□□□□ -1.81
SQS1YNL224C ALF1P53904 254 aa3.72□□□□□ -1.81
SQS1YNL224C DBP9Q06218 594 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C YBL111CQ3E7Y5 667 aa3.72□□□□□ -1.81
SQS1YNL224C HMG1P12683 1054 aa3.72□□□□□ -1.81
SQS1YNL224C KAR3P17119 729 aa3.72□□□□□ -1.81
SQS1YNL224C GLC3P32775 704 aa3.72□□□□□ -1.81
SQS1YNL224C RPC37P36121 282 aa3.72□□□□□ -1.81
SQS1YNL224C SWD1P39706 426 aa3.72□□□□□ -1.81
SQS1YNL224C VID27P40157 782 aa3.72□□□□□ -1.81
SQS1YNL224C ATG32P40458 529 aa3.72□□□□□ -1.81
SQS1YNL224C SEC26P41810 973 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C ATG1P53104 897 aa3.72□□□□□ -1.81
SQS1YNL224C PNG1Q02890 363 aa3.72□□□□□ -1.81
SQS1YNL224C YDR286CQ05530 114 aa3.72□□□□□ -1.81
SQS1YNL224C CFT1Q06632 1357 aaKnown RBP3.72□□□□□ -1.81
SQS1YNL224C YDJ1P25491 409 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C URA1P28272 314 aaPredicted RBP3.71□□□□□ -1.82
SQS1YNL224C ETP1P38748 585 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C IPL1P38991 367 aa3.71□□□□□ -1.82
SQS1YNL224C BUD6P41697 788 aa3.71□□□□□ -1.82
SQS1YNL224C BNA1P47096 177 aa3.71□□□□□ -1.82
SQS1YNL224C PIF1P07271 859 aa3.71□□□□□ -1.82
SQS1YNL224C EUG1P32474 517 aa3.71□□□□□ -1.82
SQS1YNL224C PPG1P32838 368 aa3.71□□□□□ -1.82
SQS1YNL224C NUF2P33895 451 aa3.71□□□□□ -1.82
SQS1YNL224C SAS3P34218 831 aa3.71□□□□□ -1.82
SQS1YNL224C COY1P34237 679 aa3.71□□□□□ -1.82
SQS1YNL224C APL2P36000 726 aaPredicted RBP3.71□□□□□ -1.82
SQS1YNL224C TBS1P38114 1094 aa3.71□□□□□ -1.82
SQS1YNL224C ECM1P39715 212 aa3.71□□□□□ -1.82
SQS1YNL224C SDS3P40505 327 aa3.71□□□□□ -1.82
SQS1YNL224C SRB7P47822 140 aa3.71□□□□□ -1.82
SQS1YNL224C SNZ1Q03148 297 aa3.71□□□□□ -1.82
SQS1YNL224C SXM1Q04175 944 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C RAD33Q04231 177 aa3.71□□□□□ -1.82
SQS1YNL224C SSQ1Q05931 657 aaPredicted RBP3.71□□□□□ -1.82
SQS1YNL224C UTP13Q05946 817 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C VIP1Q06685 1146 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C NOB1Q08444 459 aaKnown RBP3.71□□□□□ -1.82
SQS1YNL224C YOR378WQ08902 515 aa3.71□□□□□ -1.82
SQS1YNL224C MCD1Q12158 566 aa3.71□□□□□ -1.82
SQS1YNL224C LEU1P07264 779 aaKnown RBP3.7□□□□□ -1.82
SQS1YNL224C SRP54P20424 541 aaKnown RBP3.7□□□□□ -1.82
SQS1YNL224C PUF4P25339 888 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms