RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	ARO80	Q04052	950 aa		4.73	□□□□□ -1.65
VAC7	YNL054W	CMS1	Q07897	291 aa	Known RBP	4.73	□□□□□ -1.65
VAC7	YNL054W	RAV1	P47104	1357 aa		4.73	□□□□□ -1.65
VAC7	YNL054W	PDC1	P06169	563 aa	Known RBP	4.72	□□□□□ -1.65
VAC7	YNL054W	GCD2	P12754	651 aa	Predicted RBP	4.72	□□□□□ -1.65
VAC7	YNL054W	MRPS28	P21771	286 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	CLB4	P24871	460 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	PSO2	P30620	661 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	NPL6	P32832	435 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
VAC7	YNL054W	MPE1	P35728	441 aa	Known RBP	4.72	□□□□□ -1.65
VAC7	YNL054W	RSC8	P43609	557 aa	Known RBP	4.72	□□□□□ -1.65
VAC7	YNL054W	HCR1	Q05775	265 aa	Known RBP	4.72	□□□□□ -1.65
VAC7	YNL054W	MCM16	Q12262	181 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	CPA2	P03965	1118 aa	Known RBP	4.72	□□□□□ -1.65
VAC7	YNL054W	RPO26	P20435	155 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	DPB3	P27344	201 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	CDC11	P32458	415 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	SEC66	P33754	206 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	YKR018C	P36114	725 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	SFH1	Q06168	426 aa		4.72	□□□□□ -1.65
VAC7	YNL054W	RPC82	P32349	654 aa		4.71	□□□□□ -1.65
VAC7	YNL054W	YKR023W	P36119	530 aa	Known RBP	4.71	□□□□□ -1.65
VAC7	YNL054W	HYR1	P40581	163 aa	Known RBP	4.71	□□□□□ -1.65
VAC7	YNL054W	ILM1	P47155	203 aa		4.71	□□□□□ -1.65
VAC7	YNL054W	ZPR1	P53303	486 aa	Known RBP	4.71	□□□□□ -1.65
VAC7	YNL054W	SRT1	Q03175	343 aa		4.71	□□□□□ -1.65
VAC7	YNL054W	UBX2	Q04228	584 aa		4.71	□□□□□ -1.65
VAC7	YNL054W	TY1B-A	O13527	1196 aa	Known RBP	4.71	□□□□□ -1.66
VAC7	YNL054W	ARG1	P22768	420 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	MPH1	P40562	993 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	INA22	P40576	216 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	BUD6	P41697	788 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	TRS85	P46944	698 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	RRP15	Q06511	250 aa	Predicted RBP	4.71	□□□□□ -1.66
VAC7	YNL054W	YLL054C	Q12244	843 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	LYS2	P07702	1392 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	BUD14	P27637	709 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	CAF130	P53280	1122 aa	Predicted RBP	4.71	□□□□□ -1.66
VAC7	YNL054W	ESF2	P53743	316 aa	Known RBP	4.71	□□□□□ -1.66
VAC7	YNL054W	OSH2	Q12451	1283 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	NCB2	Q92317	146 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	YML133C	Q03099	1374 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	YLL067C	Q07888	1374 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	YLL066C	Q99208	1374 aa		4.71	□□□□□ -1.66
VAC7	YNL054W	BNI1	P41832	1953 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	BUD3	P25558	1636 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	PDR1	P12383	1068 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	BTN2	P53286	410 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	RCM1	P53972	490 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	GIR2	Q03768	265 aa	Predicted RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	YKU80	Q04437	629 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	TSR1	Q07381	788 aa	Known RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	VTH1	P40438	1549 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	VTH2	P40890	1549 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	KRS1	P15180	591 aa	Known RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	RGP1	P16664	663 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	RAD53	P22216	821 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	SSE1	P32589	693 aa	Known RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	PTH2	P34222	208 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	ATG9	Q12142	997 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	PDR18	P53756	1333 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	DNF2	Q12675	1612 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	PRP16	P15938	1071 aa	Predicted RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	RPC19	P28000	142 aa	Known RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	SEC65	P29478	273 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	EXO84	P38261	753 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	AIM20	P40451	204 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	ATG36	P46983	293 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	VPS64	Q03944	604 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	PGA3	Q12746	312 aa	Known RBP	4.7	□□□□□ -1.66
VAC7	YNL054W	ATG2	P53855	1592 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	YOR093C	Q12275	1648 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	BNR1	P40450	1375 aa		4.7	□□□□□ -1.66
VAC7	YNL054W	IMP2'	P32351	346 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	SEG2	P34250	1132 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	DSL1	P53847	754 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	VPS75	P53853	264 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	YOR223W	Q12015	292 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	RRP6	Q12149	733 aa	Known RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	GSY2	P27472	705 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	STM1	P39015	273 aa	Known RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	YRB1	P41920	201 aa	Known RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	ERP6	P53198	216 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	MMR1	Q06324	491 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	HCA4	P20448	770 aa	Known RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	SRP40	P32583	406 aa	Predicted RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	CIC1	P38779	376 aa	Known RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	AIM9	P40053	627 aa	Known RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	MIC19	P43594	170 aa		4.69	□□□□□ -1.66
VAC7	YNL054W	FYV8	P46949	817 aa	Known RBP	4.69	□□□□□ -1.66
VAC7	YNL054W	DPS1	P04802	557 aa	Known RBP	4.68	□□□□□ -1.66
VAC7	YNL054W	MBR1	P23493	339 aa		4.68	□□□□□ -1.66
VAC7	YNL054W	ELM1	P32801	640 aa		4.68	□□□□□ -1.66
VAC7	YNL054W	ECM4	P36156	370 aa		4.68	□□□□□ -1.66
VAC7	YNL054W	VTC2	P43585	828 aa		4.68	□□□□□ -1.66
VAC7	YNL054W	UFD2	P54860	961 aa		4.68	□□□□□ -1.66
VAC7	YNL054W	NDL1	Q06568	189 aa		4.68	□□□□□ -1.66
VAC7	YNL054W	RIM20	Q12033	661 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms