RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	HAL5	P38970	855 aa	Known RBP	13.86	□□□□□ -0.19
CUE1	YMR264W	CTH1	P47976	325 aa		13.86	□□□□□ -0.19
CUE1	YMR264W	BDF2	Q07442	638 aa		13.86	□□□□□ -0.19
CUE1	YMR264W	TSR3	Q12094	313 aa	Known RBP	13.86	□□□□□ -0.19
CUE1	YMR264W	DPH6	Q12429	685 aa		13.86	□□□□□ -0.19
CUE1	YMR264W	MGM1	P32266	881 aa		13.85	□□□□□ -0.19
CUE1	YMR264W	BBC1	P47068	1157 aa		13.85	□□□□□ -0.19
CUE1	YMR264W	ALD3	P54114	506 aa		13.85	□□□□□ -0.19
CUE1	YMR264W	HPC2	Q01448	625 aa		13.85	□□□□□ -0.19
CUE1	YMR264W	PGA3	Q12746	312 aa	Known RBP	13.85	□□□□□ -0.19
CUE1	YMR264W	SYF1	Q04048	859 aa	Predicted RBP	13.84	□□□□□ -0.19
CUE1	YMR264W	PMD1	P32634	1753 aa		13.83	□□□□□ -0.19
CUE1	YMR264W	GLO3	P38682	493 aa	Known RBP	13.83	□□□□□ -0.2
CUE1	YMR264W	ICP55	P40051	511 aa		13.83	□□□□□ -0.2
CUE1	YMR264W	ENP2	P48234	707 aa	Known RBP	13.83	□□□□□ -0.2
CUE1	YMR264W	LAM4	P38800	1345 aa		13.83	□□□□□ -0.2
CUE1	YMR264W	TOS1	P38288	455 aa		13.82	□□□□□ -0.2
CUE1	YMR264W	NUG1	P40010	520 aa	Known RBP	13.82	□□□□□ -0.2
CUE1	YMR264W	CTF18	P49956	741 aa		13.82	□□□□□ -0.2
CUE1	YMR264W	ARP5	P53946	755 aa		13.82	□□□□□ -0.2
CUE1	YMR264W	HYR1	P40581	163 aa	Known RBP	13.81	□□□□□ -0.2
CUE1	YMR264W	CIR1	P42940	261 aa		13.81	□□□□□ -0.2
CUE1	YMR264W	ALD2	P47771	506 aa		13.81	□□□□□ -0.2
CUE1	YMR264W	PKH3	Q03306	898 aa	Predicted RBP	13.81	□□□□□ -0.2
CUE1	YMR264W	TAH18	Q12181	623 aa		13.81	□□□□□ -0.2
CUE1	YMR264W	KEX1	P09620	729 aa		13.8	□□□□□ -0.2
CUE1	YMR264W	VID28	P40547	921 aa		13.8	□□□□□ -0.2
CUE1	YMR264W	FAS2	P19097	1887 aa	Known RBP	13.79	□□□□□ -0.2
CUE1	YMR264W	PEP3	P27801	918 aa		13.79	□□□□□ -0.2
CUE1	YMR264W	KNS1	P32350	737 aa	Predicted RBP	13.79	□□□□□ -0.2
CUE1	YMR264W	TTI1	P36097	1038 aa		13.79	□□□□□ -0.2
CUE1	YMR264W	MET1	P36150	593 aa		13.79	□□□□□ -0.2
CUE1	YMR264W	PEX14	P53112	341 aa		13.79	□□□□□ -0.2
CUE1	YMR264W	IRC3	Q06683	689 aa		13.79	□□□□□ -0.2
CUE1	YMR264W	SSF2	Q12153	453 aa	Predicted RBP	13.79	□□□□□ -0.2
CUE1	YMR264W	IMP2'	P32351	346 aa		13.78	□□□□□ -0.2
CUE1	YMR264W	PRX1	P34227	261 aa	Known RBP	13.78	□□□□□ -0.2
CUE1	YMR264W	YIR042C	P40586	236 aa		13.78	□□□□□ -0.2
CUE1	YMR264W	KAR5	Q04746	504 aa		13.78	□□□□□ -0.2
CUE1	YMR264W	INM2	Q05533	292 aa		13.78	□□□□□ -0.2
CUE1	YMR264W	ESF1	Q06344	628 aa	Known RBP	13.78	□□□□□ -0.2
CUE1	YMR264W	FIG2	P25653	1609 aa		13.78	□□□□□ -0.2
CUE1	YMR264W	SSA2	P10592	639 aa	Known RBP	13.77	□□□□□ -0.21
CUE1	YMR264W	FRD1	P32614	470 aa	Known RBP	13.77	□□□□□ -0.21
CUE1	YMR264W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.77	□□□□□ -0.21	not detected
CUE1	YMR264W	RPN1	P38764	993 aa	Known RBP	13.77	□□□□□ -0.21
CUE1	YMR264W	IRC8	P47046	822 aa		13.77	□□□□□ -0.21
CUE1	YMR264W	YKE2	P52553	114 aa		13.77	□□□□□ -0.21
CUE1	YMR264W	PEX19	Q07418	342 aa		13.77	□□□□□ -0.21
CUE1	YMR264W	PSK2	Q08217	1101 aa		13.77	□□□□□ -0.21
CUE1	YMR264W	RVS167	P39743	482 aa	Known RBP	13.76	□□□□□ -0.21
CUE1	YMR264W	ENT3	P47160	408 aa		13.76	□□□□□ -0.21
CUE1	YMR264W	RPT4	P53549	437 aa	Known RBP	13.76	□□□□□ -0.21
CUE1	YMR264W	SAS4	Q04003	481 aa		13.76	□□□□□ -0.21
CUE1	YMR264W	AIM44	Q99299	758 aa		13.76	□□□□□ -0.21
CUE1	YMR264W	FBP26	P32604	452 aa		13.75	□□□□□ -0.21
CUE1	YMR264W	SIS2	P36024	562 aa		13.75	□□□□□ -0.21
CUE1	YMR264W	GRX7	P38068	203 aa		13.75	□□□□□ -0.21
CUE1	YMR264W	YBL086C	P38177	466 aa		13.75	□□□□□ -0.21
CUE1	YMR264W	YHL017W	P38745	532 aa		13.75	□□□□□ -0.21
CUE1	YMR264W	GTT3	P39996	337 aa		13.75	□□□□□ -0.21
CUE1	YMR264W	ELG1	Q12050	791 aa		13.75	□□□□□ -0.21
CUE1	YMR264W	CPA2	P03965	1118 aa	Known RBP	13.74	□□□□□ -0.21
CUE1	YMR264W	CAF20	P12962	161 aa	Known RBP	13.74	□□□□□ -0.21
CUE1	YMR264W	RPN12	P32496	274 aa		13.74	□□□□□ -0.21
CUE1	YMR264W	SPL2	P38839	148 aa		13.74	□□□□□ -0.21
CUE1	YMR264W	RSM25	P40496	264 aa		13.74	□□□□□ -0.21
CUE1	YMR264W	MATALPHA2	P0CY08	210 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	HMLALPHA2	P0CY09	210 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	NPL4	P33755	580 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	IOC3	P43596	787 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	YPR148C	Q06523	435 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	PPM2	Q08282	695 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	YPL150W	Q12152	901 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	APC11	Q12157	165 aa		13.73	□□□□□ -0.21
CUE1	YMR264W	HKR1	P41809	1802 aa		13.72	□□□□□ -0.21
CUE1	YMR264W	CYB2	P00175	591 aa		13.72	□□□□□ -0.21
CUE1	YMR264W	GEF1	P37020	779 aa		13.72	□□□□□ -0.21
CUE1	YMR264W	PFF1	P38244	976 aa		13.72	□□□□□ -0.21
CUE1	YMR264W	RRP8	P38961	392 aa	Known RBP	13.72	□□□□□ -0.21
CUE1	YMR264W	ECM23	Q02710	187 aa		13.72	□□□□□ -0.21
CUE1	YMR264W	IRC4	Q03036	179 aa		13.72	□□□□□ -0.21
CUE1	YMR264W	SPN1	Q06505	410 aa	Predicted RBP	13.72	□□□□□ -0.21
CUE1	YMR264W	SIT4	P20604	311 aa		13.71	□□□□□ -0.21
CUE1	YMR264W	KRE2	P27809	442 aa		13.71	□□□□□ -0.21
CUE1	YMR264W	CRG1	P38892	291 aa	RIP-Chip data	13.71	□□□□□ -0.21	not detected
CUE1	YMR264W	RSC1	P53236	928 aa		13.71	□□□□□ -0.21
CUE1	YMR264W	COQ1	P18900	473 aa		13.69	□□□□□ -0.22
CUE1	YMR264W	ELM1	P32801	640 aa		13.69	□□□□□ -0.22
CUE1	YMR264W	DID4	P36108	232 aa		13.69	□□□□□ -0.22
CUE1	YMR264W	UGA2	P38067	497 aa		13.69	□□□□□ -0.22
CUE1	YMR264W	CCT5	P40413	562 aa	Known RBP	13.69	□□□□□ -0.22
CUE1	YMR264W	BUD6	P41697	788 aa		13.69	□□□□□ -0.22
CUE1	YMR264W	PIL1	P53252	339 aa	Known RBP	13.69	□□□□□ -0.22
CUE1	YMR264W	KRE33	P53914	1056 aa	Known RBP	13.69	□□□□□ -0.22
CUE1	YMR264W	LCD1	Q04377	747 aa		13.69	□□□□□ -0.22
CUE1	YMR264W	MBR1	P23493	339 aa		13.68	□□□□□ -0.22
CUE1	YMR264W	LCB1	P25045	558 aa	Known RBP	13.68	□□□□□ -0.22
CUE1	YMR264W	RPT3	P33298	428 aa	Known RBP	13.68	□□□□□ -0.22
CUE1	YMR264W	RER2	P35196	286 aa		13.68	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms