RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W DSD1P53095 428 aa6.15□□□□□ -1.42
SPG4YMR107W SRT1Q03175 343 aa6.15□□□□□ -1.42
SPG4YMR107W RNR2P09938 399 aaKnown RBP6.14□□□□□ -1.43
SPG4YMR107W RNA1P11745 407 aaKnown RBP6.14□□□□□ -1.43
SPG4YMR107W TAF13P11747 167 aa6.14□□□□□ -1.43
SPG4YMR107W CLB1P24868 471 aa6.14□□□□□ -1.43
SPG4YMR107W MRC1P25588 1096 aa6.14□□□□□ -1.43
SPG4YMR107W GCD7P32502 381 aaPredicted RBP6.14□□□□□ -1.43
SPG4YMR107W SAP190P36123 1033 aa6.14□□□□□ -1.43
SPG4YMR107W SLI15P38283 698 aa6.14□□□□□ -1.43
SPG4YMR107W RFC1P38630 861 aaKnown RBP6.14□□□□□ -1.43
SPG4YMR107W STR2P47164 639 aa6.14□□□□□ -1.43
SPG4YMR107W YGL081WP53156 320 aa6.14□□□□□ -1.43
SPG4YMR107W PEX29Q03370 554 aa6.14□□□□□ -1.43
SPG4YMR107W COG4Q06096 861 aa6.14□□□□□ -1.43
SPG4YMR107W CTI6Q08923 506 aa6.14□□□□□ -1.43
SPG4YMR107W YRF1-2P40105 1681 aa6.14□□□□□ -1.43
SPG4YMR107W USO1P25386 1790 aa6.13□□□□□ -1.43
SPG4YMR107W RAD54P32863 898 aa6.13□□□□□ -1.43
SPG4YMR107W TTI1P36097 1038 aa6.13□□□□□ -1.43
SPG4YMR107W RTT107P38850 1070 aa6.13□□□□□ -1.43
SPG4YMR107W IPL1P38991 367 aa6.13□□□□□ -1.43
SPG4YMR107W CCT5P40413 562 aaKnown RBP6.13□□□□□ -1.43
SPG4YMR107W SPO1P53541 631 aa6.13□□□□□ -1.43
SPG4YMR107W CAB1Q04430 367 aa6.13□□□□□ -1.43
SPG4YMR107W YDR344CQ05510 147 aa6.13□□□□□ -1.43
SPG4YMR107W KAR2P16474 682 aaKnown RBP6.12□□□□□ -1.43
SPG4YMR107W PCS60P38137 543 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SPG4YMR107W YNG2P38806 282 aaKnown RBP6.12□□□□□ -1.43
SPG4YMR107W CCC2P38995 1004 aa6.12□□□□□ -1.43
SPG4YMR107W GYP7P48365 746 aa6.12□□□□□ -1.43
SPG4YMR107W DDP1Q99321 188 aaKnown RBP6.12□□□□□ -1.43
SPG4YMR107W TRS33Q99394 268 aa6.12□□□□□ -1.43
SPG4YMR107W TY1B-NL2Q99337 1749 aaKnown RBP6.11□□□□□ -1.43
SPG4YMR107W RPO41P13433 1351 aaKnown RBP6.11□□□□□ -1.43
SPG4YMR107W YNL050CP53952 270 aa6.11□□□□□ -1.43
SPG4YMR107W RNT1Q02555 471 aa6.11□□□□□ -1.43
SPG4YMR107W YDR090CQ03193 310 aa6.11□□□□□ -1.43
SPG4YMR107W PRP3Q03338 469 aaPredicted RBP6.11□□□□□ -1.43
SPG4YMR107W TLG2Q08144 397 aa6.11□□□□□ -1.43
SPG4YMR107W MPC54Q08550 464 aa6.11□□□□□ -1.43
SPG4YMR107W SPB4P25808 606 aaPredicted RBP6.1□□□□□ -1.43
SPG4YMR107W PSE1P32337 1089 aaKnown RBP6.1□□□□□ -1.43
SPG4YMR107W AAP1P37898 856 aaKnown RBP6.1□□□□□ -1.43
SPG4YMR107W PRE3P38624 215 aa6.1□□□□□ -1.43
SPG4YMR107W FYV10P40492 516 aa6.1□□□□□ -1.43
SPG4YMR107W PRP31P49704 494 aaPredicted RBP6.1□□□□□ -1.43
SPG4YMR107W YPL150WQ12152 901 aa6.1□□□□□ -1.43
SPG4YMR107W SRP40P32583 406 aaPredicted RBP6.09□□□□□ -1.43
SPG4YMR107W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
SPG4YMR107W CTH1P47976 325 aa6.09□□□□□ -1.43
SPG4YMR107W ELP4Q02884 456 aaKnown RBP6.09□□□□□ -1.43
SPG4YMR107W AOS1Q06624 347 aa6.09□□□□□ -1.43
SPG4YMR107W GPA1P08539 472 aa6.08□□□□□ -1.44
SPG4YMR107W DAL7P21826 554 aa6.08□□□□□ -1.44
SPG4YMR107W CHL1P22516 861 aaPredicted RBP6.08□□□□□ -1.44
SPG4YMR107W MFT1P33441 392 aaKnown RBP6.08□□□□□ -1.44
SPG4YMR107W NTH2P35172 780 aa6.08□□□□□ -1.44
SPG4YMR107W DEF1P35732 738 aaKnown RBP6.08□□□□□ -1.44
SPG4YMR107W KIC1P38692 1080 aa6.08□□□□□ -1.44
SPG4YMR107W ARH1P48360 493 aa6.08□□□□□ -1.44
SPG4YMR107W YGR122WP53272 402 aa6.08□□□□□ -1.44
SPG4YMR107W SRC1Q03707 834 aa6.08□□□□□ -1.44
SPG4YMR107W RPN7Q06103 429 aaKnown RBP6.08□□□□□ -1.44
SPG4YMR107W ADE6P38972 1358 aaKnown RBP6.07□□□□□ -1.44
SPG4YMR107W LEU2P04173 364 aaPredicted RBP6.07□□□□□ -1.44
SPG4YMR107W SES1P07284 462 aaKnown RBP6.07□□□□□ -1.44
SPG4YMR107W SWI3P32591 825 aa6.07□□□□□ -1.44
SPG4YMR107W GRX4P32642 244 aa6.07□□□□□ -1.44
SPG4YMR107W PRX1P34227 261 aaKnown RBP6.07□□□□□ -1.44
SPG4YMR107W MUD2P36084 527 aaKnown RBP6.07□□□□□ -1.44
SPG4YMR107W AKL1P38080 1108 aaKnown RBP6.07□□□□□ -1.44
SPG4YMR107W PCH2P38126 564 aa6.07□□□□□ -1.44
SPG4YMR107W PSY4P38193 441 aa6.07□□□□□ -1.44
SPG4YMR107W RGD1P38339 666 aa6.07□□□□□ -1.44
SPG4YMR107W MSH4P40965 878 aaPredicted RBP6.07□□□□□ -1.44
SPG4YMR107W PRP43P53131 767 aaKnown RBP6.07□□□□□ -1.44
SPG4YMR107W YNL011CP53980 444 aa6.07□□□□□ -1.44
SPG4YMR107W DPL1Q05567 589 aa6.07□□□□□ -1.44
SPG4YMR107W SFH1Q06168 426 aa6.07□□□□□ -1.44
SPG4YMR107W MCM16Q12262 181 aa6.07□□□□□ -1.44
SPG4YMR107W PDI1P17967 522 aaKnown RBP6.06□□□□□ -1.44
SPG4YMR107W RAD51P25454 400 aa6.06□□□□□ -1.44
SPG4YMR107W RDS1P25611 832 aa6.06□□□□□ -1.44
SPG4YMR107W RAD24P32641 659 aa6.06□□□□□ -1.44
SPG4YMR107W PAP2P53632 584 aaKnown RBP6.06□□□□□ -1.44
SPG4YMR107W RIA1P53893 1110 aa6.06□□□□□ -1.44
SPG4YMR107W ECM23Q02710 187 aa6.06□□□□□ -1.44
SPG4YMR107W WAR1Q03631 944 aa6.06□□□□□ -1.44
SPG4YMR107W CDC73Q06697 393 aa6.06□□□□□ -1.44
SPG4YMR107W ETT1Q08421 412 aaKnown RBP6.06□□□□□ -1.44
SPG4YMR107W APL4Q12028 832 aa6.06□□□□□ -1.44
SPG4YMR107W CPA2P03965 1118 aaKnown RBP6.05□□□□□ -1.44
SPG4YMR107W PBS2P08018 668 aa6.05□□□□□ -1.44
SPG4YMR107W RPL19AP0CX82 189 aaKnown RBP6.05□□□□□ -1.44
SPG4YMR107W RPL19BP0CX83 189 aaPredicted RBP6.05□□□□□ -1.44
SPG4YMR107W SWH1P35845 1188 aa6.05□□□□□ -1.44
SPG4YMR107W KTR3P38130 404 aaPredicted RBP6.05□□□□□ -1.44
SPG4YMR107W GDT1P38301 280 aaPredicted RBP6.05□□□□□ -1.44
SPG4YMR107W RCM1P53972 490 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms