RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeastyeast

Gene YPT6, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT6YLR262C HXT5P38695 592 aa6.74□□□□□ -1.33
YPT6YLR262C SKP1P52286 194 aa6.74□□□□□ -1.33
YPT6YLR262C CWH41P53008 833 aa6.74□□□□□ -1.33
YPT6YLR262C TAT1P38085 619 aa6.73□□□□□ -1.33
YPT6YLR262C SLN1P39928 1220 aaPredicted RBP6.73□□□□□ -1.33
YPT6YLR262C CUS1Q02554 436 aaPredicted RBP6.73□□□□□ -1.33
YPT6YLR262C ECM23Q02710 187 aa6.73□□□□□ -1.33
YPT6YLR262C TRS33Q99394 268 aa6.72□□□□□ -1.33
YPT6YLR262C ALG14P38242 237 aa6.71□□□□□ -1.34
YPT6YLR262C PRK1P40494 810 aa6.71□□□□□ -1.34
YPT6YLR262C NHA1Q99271 985 aa6.71□□□□□ -1.34
YPT6YLR262C PGM2P37012 569 aaKnown RBP6.7□□□□□ -1.34
YPT6YLR262C APM2P38700 605 aa6.7□□□□□ -1.34
YPT6YLR262C NRD1P53617 575 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
YPT6YLR262C QDR2P40474 542 aa6.69□□□□□ -1.34
YPT6YLR262C MCA1Q08601 432 aa6.69□□□□□ -1.34
YPT6YLR262C AMN1P38285 549 aaPredicted RBP6.68□□□□□ -1.34
YPT6YLR262C UBX7P38349 436 aa6.68□□□□□ -1.34
YPT6YLR262C TPS3P38426 1054 aaKnown RBP6.68□□□□□ -1.34
YPT6YLR262C PRY1P47032 299 aa6.68□□□□□ -1.34
YPT6YLR262C RPC31P17890 251 aa6.67□□□□□ -1.34
YPT6YLR262C LSB6P42951 607 aa6.67□□□□□ -1.34
YPT6YLR262C YNR040WP53736 256 aa6.67□□□□□ -1.34
YPT6YLR262C CAB1Q04430 367 aa6.66□□□□□ -1.34
YPT6YLR262C NAR1P23503 491 aaKnown RBP6.65□□□□□ -1.34
YPT6YLR262C FOX2Q02207 900 aaKnown RBP6.65□□□□□ -1.34
YPT6YLR262C SSA4P22202 642 aaKnown RBP6.64□□□□□ -1.35
YPT6YLR262C NAB2P32505 525 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
YPT6YLR262C SUV3P32580 737 aa6.64□□□□□ -1.35
YPT6YLR262C GIS4Q04233 774 aa6.64□□□□□ -1.35
YPT6YLR262C YML083CQ04526 418 aa6.64□□□□□ -1.35
YPT6YLR262C PUP1P25043 261 aa6.63□□□□□ -1.35
YPT6YLR262C MRPL33P20084 86 aa6.62□□□□□ -1.35
YPT6YLR262C VMA3P25515 160 aa6.62□□□□□ -1.35
YPT6YLR262C DYS1P38791 387 aa6.62□□□□□ -1.35
YPT6YLR262C YPL034WQ03083 165 aa6.62□□□□□ -1.35
YPT6YLR262C BUD9P53226 547 aa6.61□□□□□ -1.35
YPT6YLR262C SUB2Q07478 446 aaKnown RBP6.61□□□□□ -1.35
YPT6YLR262C NOB1Q08444 459 aaKnown RBP6.61□□□□□ -1.35
YPT6YLR262C YOR296WQ08748 1289 aa6.61□□□□□ -1.35
YPT6YLR262C IDI1P15496 288 aa6.6□□□□□ -1.35
YPT6YLR262C YBR197CP38306 217 aa6.6□□□□□ -1.35
YPT6YLR262C ITC1P53125 1264 aa6.6□□□□□ -1.35
YPT6YLR262C LDH1P38139 375 aa6.59□□□□□ -1.35
YPT6YLR262C YER156CP40093 338 aaKnown RBP6.59□□□□□ -1.35
YPT6YLR262C ALD4P46367 519 aaKnown RBP6.59□□□□□ -1.35
YPT6YLR262C GIP1P38229 639 aa6.58□□□□□ -1.36
YPT6YLR262C RRM3P38766 723 aa6.58□□□□□ -1.36
YPT6YLR262C PUF6Q04373 656 aaKnown RBP6.58□□□□□ -1.36
YPT6YLR262C PUN1Q06991 263 aa6.58□□□□□ -1.36
YPT6YLR262C MRP10O75012 95 aa6.57□□□□□ -1.36
YPT6YLR262C AI3P03877 415 aa6.56□□□□□ -1.36
YPT6YLR262C ISC10P32645 267 aa6.56□□□□□ -1.36
YPT6YLR262C ISW1P38144 1129 aa6.56□□□□□ -1.36
YPT6YLR262C BSD2P38356 321 aa6.56□□□□□ -1.36
YPT6YLR262C RSC2Q06488 889 aa6.56□□□□□ -1.36
YPT6YLR262C SLP1Q12232 587 aa6.56□□□□□ -1.36
YPT6YLR262C GAS5Q08193 484 aa6.55□□□□□ -1.36
YPT6YLR262C SAC7P17121 654 aa6.54□□□□□ -1.36
YPT6YLR262C MAC1P35192 417 aa6.54□□□□□ -1.36
YPT6YLR262C SRS2P12954 1174 aa6.53□□□□□ -1.36
YPT6YLR262C SFA1P32771 386 aa6.52□□□□□ -1.37
YPT6YLR262C YBR287WP38355 427 aa6.52□□□□□ -1.37
YPT6YLR262C MSN1P22148 382 aa6.51□□□□□ -1.37
YPT6YLR262C YJL181WP46987 611 aa6.51□□□□□ -1.37
YPT6YLR262C ARI1P53111 347 aaKnown RBP6.51□□□□□ -1.37
YPT6YLR262C ALO1P54783 526 aaKnown RBP6.51□□□□□ -1.37
YPT6YLR262C FIR1P40020 876 aa6.5□□□□□ -1.37
YPT6YLR262C GIP2P40036 548 aa6.5□□□□□ -1.37
YPT6YLR262C YIL165CP40446 119 aa6.5□□□□□ -1.37
YPT6YLR262C PPT1P53043 513 aa6.5□□□□□ -1.37
YPT6YLR262C SOK2P53438 785 aaPredicted RBP6.5□□□□□ -1.37
YPT6YLR262C TED1P40533 473 aa6.49□□□□□ -1.37
YPT6YLR262C TY4B-PA0A0B7P3V8 1104 aa6.48□□□□□ -1.37
YPT6YLR262C SSA1P10591 642 aaKnown RBP6.48□□□□□ -1.37
YPT6YLR262C RSC6P25632 483 aa6.48□□□□□ -1.37
YPT6YLR262C COQ2P32378 372 aa6.48□□□□□ -1.37
YPT6YLR262C OMA1P36163 345 aa6.48□□□□□ -1.37
YPT6YLR262C CWC15Q03772 175 aaKnown RBP6.48□□□□□ -1.37
YPT6YLR262C TY4A-HQ6Q5P6 413 aa6.48□□□□□ -1.37
YPT6YLR262C RRN6P32786 894 aa6.47□□□□□ -1.37
YPT6YLR262C PGM1P33401 570 aaKnown RBP6.47□□□□□ -1.37
YPT6YLR262C HXT8P40886 569 aa6.47□□□□□ -1.37
YPT6YLR262C RPL34AP87262 121 aaPredicted RBP6.47□□□□□ -1.37
YPT6YLR262C PNP1Q05788 311 aa6.47□□□□□ -1.37
YPT6YLR262C INP51P40559 946 aaKnown RBP6.45□□□□□ -1.38
YPT6YLR262C DSE4P53753 1117 aa6.45□□□□□ -1.38
YPT6YLR262C EMG1Q06287 252 aaKnown RBP6.45□□□□□ -1.38
YPT6YLR262C AIM46P38885 310 aa6.44□□□□□ -1.38
YPT6YLR262C KAE1P36132 386 aa6.43□□□□□ -1.38
YPT6YLR262C SUT1P53032 299 aaKnown RBP6.43□□□□□ -1.38
YPT6YLR262C TY1A-NL1Q12391 440 aaKnown RBP6.43□□□□□ -1.38
YPT6YLR262C INP52P50942 1183 aa6.42□□□□□ -1.38
YPT6YLR262C GEF1P37020 779 aa6.41□□□□□ -1.38
YPT6YLR262C LEM3P42838 414 aa6.41□□□□□ -1.38
YPT6YLR262C GUP1P53154 560 aa6.41□□□□□ -1.38
YPT6YLR262C RGD2P43556 714 aa6.4□□□□□ -1.38
YPT6YLR262C BIO5P53744 561 aaKnown RBP6.4□□□□□ -1.38
YPT6YLR262C MED7Q08278 222 aa6.4□□□□□ -1.38
YPT6YLR262C APC11Q12157 165 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms