RNA–Protein interactions for RNA: YLR180W

SAM1, Transcript of S-adenosylmethionine synthetase, yeast

Gene SAM1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM1	YLR180W	IRC4	Q03036	179 aa		12	□□□□□ -0.49
SAM1	YLR180W	YLR225C	Q05948	407 aa	Known RBP	12	□□□□□ -0.49
SAM1	YLR180W	NOP2	P40991	618 aa	Known RBP	11.99	□□□□□ -0.49
SAM1	YLR180W	LCB1	P25045	558 aa	Known RBP	11.98	□□□□□ -0.49
SAM1	YLR180W	SRC1	Q03707	834 aa		11.98	□□□□□ -0.49
SAM1	YLR180W	THI22	Q06490	572 aa		11.98	□□□□□ -0.49
SAM1	YLR180W	YDR306C	Q06640	478 aa		11.98	□□□□□ -0.49
SAM1	YLR180W	PSH1	Q12161	406 aa		11.98	□□□□□ -0.49
SAM1	YLR180W	SET1	P38827	1080 aa	Known RBP	11.97	□□□□□ -0.49
SAM1	YLR180W	SPR3	P41901	512 aa		11.97	□□□□□ -0.49
SAM1	YLR180W	JJJ2	P46997	583 aa		11.97	□□□□□ -0.49
SAM1	YLR180W	RTT109	Q07794	436 aa		11.97	□□□□□ -0.49
SAM1	YLR180W	WRS1	Q12109	432 aa	Known RBP	11.96	□□□□□ -0.49
SAM1	YLR180W	PAH1	P32567	862 aa		11.95	□□□□□ -0.5
SAM1	YLR180W	GIN4	Q12263	1142 aa		11.95	□□□□□ -0.5
SAM1	YLR180W	MRP7	P12687	371 aa		11.94	□□□□□ -0.5
SAM1	YLR180W	YJL171C	P46992	396 aa		11.94	□□□□□ -0.5
SAM1	YLR180W	MPP10	P47083	593 aa	Known RBP	11.94	□□□□□ -0.5
SAM1	YLR180W	PEX29	Q03370	554 aa		11.94	□□□□□ -0.5
SAM1	YLR180W	PSF3	Q12146	194 aa		11.94	□□□□□ -0.5
SAM1	YLR180W	FBP1	P09201	348 aa		11.93	□□□□□ -0.5
SAM1	YLR180W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.92	□□□□□ -0.5	not detected
SAM1	YLR180W	SRT1	Q03175	343 aa		11.92	□□□□□ -0.5
SAM1	YLR180W	MTC5	Q03897	1148 aa		11.92	□□□□□ -0.5
SAM1	YLR180W	RVB2	Q12464	471 aa	Known RBP	11.92	□□□□□ -0.5
SAM1	YLR180W	NUG1	P40010	520 aa	Known RBP	11.91	□□□□□ -0.5
SAM1	YLR180W	SUP35	P05453	685 aa	Known RBP	11.9	□□□□□ -0.5
SAM1	YLR180W	SUI2	P20459	304 aa	Known RBP	11.9	□□□□□ -0.5
SAM1	YLR180W	YVH1	Q02256	364 aa	Known RBP	11.9	□□□□□ -0.5
SAM1	YLR180W	ULP1	Q02724	621 aa		11.9	□□□□□ -0.5
SAM1	YLR180W	TPS3	P38426	1054 aa	Known RBP	11.89	□□□□□ -0.51
SAM1	YLR180W	PSF2	P40359	213 aa		11.89	□□□□□ -0.51
SAM1	YLR180W	AAD16	Q02895	342 aa		11.89	□□□□□ -0.51
SAM1	YLR180W	PPM2	Q08282	695 aa		11.89	□□□□□ -0.51
SAM1	YLR180W	PUS6	P53294	404 aa		11.88	□□□□□ -0.51
SAM1	YLR180W	SNU66	Q12420	587 aa	Predicted RBP	11.88	□□□□□ -0.51
SAM1	YLR180W	ADR1	P07248	1323 aa		11.86	□□□□□ -0.51
SAM1	YLR180W	KEL1	P38853	1164 aa	Known RBP	11.86	□□□□□ -0.51
SAM1	YLR180W	RAD53	P22216	821 aa		11.85	□□□□□ -0.51
SAM1	YLR180W	RPT3	P33298	428 aa	Known RBP	11.85	□□□□□ -0.51
SAM1	YLR180W	ERG7	P38604	731 aa		11.85	□□□□□ -0.51
SAM1	YLR180W	YFH7	P43591	353 aa		11.85	□□□□□ -0.51
SAM1	YLR180W	CLA4	P48562	842 aa		11.85	□□□□□ -0.51
SAM1	YLR180W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.85	□□□□□ -0.51	not detected
SAM1	YLR180W	TPD3	P31383	635 aa		11.84	□□□□□ -0.51
SAM1	YLR180W	YGR122W	P53272	402 aa		11.84	□□□□□ -0.51
SAM1	YLR180W	HEF3	P53978	1044 aa	Known RBP	11.84	□□□□□ -0.51
SAM1	YLR180W	YPR117W	Q06116	2489 aa		11.83	□□□□□ -0.52
SAM1	YLR180W	IXR1	P33417	597 aa		11.83	□□□□□ -0.52
SAM1	YLR180W	ATG1	P53104	897 aa		11.83	□□□□□ -0.52
SAM1	YLR180W	UBP12	P39538	1254 aa		11.82	□□□□□ -0.52
SAM1	YLR180W	HXT10	P43581	546 aa		11.82	□□□□□ -0.52
SAM1	YLR180W	NET1	P47035	1189 aa		11.82	□□□□□ -0.52
SAM1	YLR180W	TAO3	P40468	2376 aa		11.81	□□□□□ -0.52
SAM1	YLR180W	SWC3	P31376	625 aa		11.81	□□□□□ -0.52
SAM1	YLR180W	VPS62	P53285	467 aa		11.81	□□□□□ -0.52
SAM1	YLR180W	PMA1	P05030	918 aa	Known RBP	11.8	□□□□□ -0.52
SAM1	YLR180W	LDH1	P38139	375 aa		11.8	□□□□□ -0.52
SAM1	YLR180W	APL6	P46682	809 aa		11.8	□□□□□ -0.52
SAM1	YLR180W	NOP8	Q08287	484 aa	Predicted RBP	11.8	□□□□□ -0.52
SAM1	YLR180W	FLO1	P32768	1537 aa		11.8	□□□□□ -0.52
SAM1	YLR180W	DUR1,2	P32528	1835 aa	Known RBP	11.79	□□□□□ -0.52
SAM1	YLR180W	ADP1	P25371	1049 aa		11.79	□□□□□ -0.52
SAM1	YLR180W	OCT1	P35999	772 aa		11.79	□□□□□ -0.52
SAM1	YLR180W	MCD4	P36051	919 aa		11.77	□□□□□ -0.53
SAM1	YLR180W	TFA1	P36100	482 aa		11.77	□□□□□ -0.53
SAM1	YLR180W	TY3A-G	Q12173	290 aa		11.77	□□□□□ -0.53
SAM1	YLR180W	MAK21	Q12176	1025 aa	Known RBP	11.77	□□□□□ -0.53
SAM1	YLR180W	TY3A-I	Q99219	290 aa		11.77	□□□□□ -0.53
SAM1	YLR180W	CDC60	P26637	1090 aa	Known RBP	11.76	□□□□□ -0.53
SAM1	YLR180W	RAD24	P32641	659 aa		11.76	□□□□□ -0.53
SAM1	YLR180W	EAR1	Q03212	550 aa		11.76	□□□□□ -0.53
SAM1	YLR180W	CFT2	Q12102	859 aa	Predicted RBP	11.76	□□□□□ -0.53
SAM1	YLR180W	RAD2	P07276	1031 aa		11.75	□□□□□ -0.53
SAM1	YLR180W	DLD1	P32891	587 aa		11.75	□□□□□ -0.53
SAM1	YLR180W	FPR3	P38911	411 aa	Known RBP	11.75	□□□□□ -0.53
SAM1	YLR180W	ACA1	P39970	489 aa		11.75	□□□□□ -0.53
SAM1	YLR180W	YDJ1	P25491	409 aa	Known RBP	11.74	□□□□□ -0.53
SAM1	YLR180W	SNF3	P10870	884 aa		11.73	□□□□□ -0.53
SAM1	YLR180W	PTK1	P36002	662 aa	Predicted RBP	11.73	□□□□□ -0.53
SAM1	YLR180W	YIR042C	P40586	236 aa		11.73	□□□□□ -0.53
SAM1	YLR180W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.73	□□□□□ -0.53	not detected
SAM1	YLR180W	MDL2	P33311	773 aa		11.72	□□□□□ -0.53
SAM1	YLR180W	SPT21	P35209	758 aa		11.72	□□□□□ -0.53
SAM1	YLR180W	YBL028C	P38202	106 aa		11.72	□□□□□ -0.53
SAM1	YLR180W	FUN12	P39730	1002 aa	Known RBP	11.72	□□□□□ -0.53
SAM1	YLR180W	VAB2	P40003	282 aa		11.72	□□□□□ -0.53
SAM1	YLR180W	FIR1	P40020	876 aa		11.72	□□□□□ -0.53
SAM1	YLR180W	LYS14	P40971	790 aa		11.72	□□□□□ -0.53
SAM1	YLR180W	GLO3	P38682	493 aa	Known RBP	11.71	□□□□□ -0.53
SAM1	YLR180W	BOI2	P39969	1040 aa		11.71	□□□□□ -0.53
SAM1	YLR180W	YIL092W	P40497	633 aa		11.71	□□□□□ -0.53
SAM1	YLR180W	WHI3	P34761	661 aa	Known RBP	11.7	□□□□□ -0.54
SAM1	YLR180W	INM2	Q05533	292 aa		11.7	□□□□□ -0.54
SAM1	YLR180W	ECM30	Q06673	1274 aa		11.7	□□□□□ -0.54
SAM1	YLR180W	TUB2	P02557	457 aa	Known RBP	11.69	□□□□□ -0.54
SAM1	YLR180W	SRS2	P12954	1174 aa		11.69	□□□□□ -0.54
SAM1	YLR180W	ICL2	Q12031	575 aa		11.69	□□□□□ -0.54
SAM1	YLR180W	YOR131C	Q12486	218 aa		11.69	□□□□□ -0.54
SAM1	YLR180W	PCL8	Q08966	492 aa		11.68	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms