RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C YNL165WP53891 406 aa5.64□□□□□ -1.51
SRP40YKR092C PSH1Q12161 406 aa5.64□□□□□ -1.51
SRP40YKR092C PDC6P26263 563 aaKnown RBP5.63□□□□□ -1.51
SRP40YKR092C GLO3P38682 493 aaKnown RBP5.63□□□□□ -1.51
SRP40YKR092C SBE2P42223 864 aaKnown RBP5.63□□□□□ -1.51
SRP40YKR092C NOP8Q08287 484 aaPredicted RBP5.63□□□□□ -1.51
SRP40YKR092C LSO1Q3E827 93 aa5.63□□□□□ -1.51
SRP40YKR092C RPS31P05759 152 aaKnown RBP5.62□□□□□ -1.51
SRP40YKR092C TRL1P09880 827 aaKnown RBP5.62□□□□□ -1.51
SRP40YKR092C YTA6P40328 754 aa5.62□□□□□ -1.51
SRP40YKR092C ATG1P53104 897 aa5.62□□□□□ -1.51
SRP40YKR092C MRPL33P20084 86 aa5.61□□□□□ -1.51
SRP40YKR092C FPS1P23900 669 aa5.61□□□□□ -1.51
SRP40YKR092C MLF3P32047 452 aa5.61□□□□□ -1.51
SRP40YKR092C BOI1P38041 980 aaKnown RBP5.61□□□□□ -1.51
SRP40YKR092C MRPL16P38064 232 aa5.61□□□□□ -1.51
SRP40YKR092C GRS1P38088 690 aaKnown RBP5.61□□□□□ -1.51
SRP40YKR092C QDR1P40475 563 aa5.61□□□□□ -1.51
SRP40YKR092C UTP4Q06679 776 aaKnown RBP5.61□□□□□ -1.51
SRP40YKR092C TDA6Q06466 467 aa5.6□□□□□ -1.51
SRP40YKR092C VMA3P25515 160 aa5.59□□□□□ -1.51
SRP40YKR092C STM1P39015 273 aaKnown RBP5.59□□□□□ -1.51
SRP40YKR092C MDJ2P42834 146 aa5.59□□□□□ -1.51
SRP40YKR092C ACF4P47129 309 aa5.59□□□□□ -1.51
SRP40YKR092C STB3Q12427 513 aa5.59□□□□□ -1.51
SRP40YKR092C YPR053CQ6Q5F3 151 aa5.59□□□□□ -1.51
SRP40YKR092C GPM1P00950 247 aaKnown RBP5.58□□□□□ -1.52
SRP40YKR092C CCT8P47079 568 aaKnown RBP5.58□□□□□ -1.52
SRP40YKR092C SGS1P35187 1447 aa5.57□□□□□ -1.52
SRP40YKR092C KAP122P32767 1081 aa5.57□□□□□ -1.52
SRP40YKR092C LDH1P38139 375 aa5.57□□□□□ -1.52
SRP40YKR092C QDR2P40474 542 aa5.57□□□□□ -1.52
SRP40YKR092C SPR3P41901 512 aa5.57□□□□□ -1.52
SRP40YKR092C YNR014WP53719 212 aa5.57□□□□□ -1.52
SRP40YKR092C APC11Q12157 165 aa5.57□□□□□ -1.52
SRP40YKR092C DYS1P38791 387 aa5.56□□□□□ -1.52
SRP40YKR092C SUT1P53032 299 aaKnown RBP5.56□□□□□ -1.52
SRP40YKR092C MTO1P53070 669 aa5.56□□□□□ -1.52
SRP40YKR092C LEU1P07264 779 aaKnown RBP5.55□□□□□ -1.52
SRP40YKR092C RPB10P22139 70 aa5.55□□□□□ -1.52
SRP40YKR092C YHL050CP38721 697 aa5.55□□□□□ -1.52
SRP40YKR092C YHR219WP38900 624 aa5.55□□□□□ -1.52
SRP40YKR092C ALD2P47771 506 aa5.55□□□□□ -1.52
SRP40YKR092C SEN54Q02825 467 aaPredicted RBP5.55□□□□□ -1.52
SRP40YKR092C YMR187CQ03236 431 aa5.55□□□□□ -1.52
SRP40YKR092C MSC6Q08818 692 aaKnown RBP5.55□□□□□ -1.52
SRP40YKR092C GLT1Q12680 2145 aaKnown RBP5.54□□□□□ -1.52
SRP40YKR092C SEC20P28791 383 aa5.54□□□□□ -1.52
SRP40YKR092C SKN7P38889 622 aa5.54□□□□□ -1.52
SRP40YKR092C HXT8P40886 569 aa5.54□□□□□ -1.52
SRP40YKR092C IPL1P38991 367 aa5.53□□□□□ -1.52
SRP40YKR092C FIR1P40020 876 aa5.53□□□□□ -1.52
SRP40YKR092C TY1A-DR2Q03964 440 aaKnown RBP5.53□□□□□ -1.52
SRP40YKR092C SPA2P23201 1466 aaKnown RBP5.52□□□□□ -1.53
SRP40YKR092C PDC5P16467 563 aaKnown RBP5.52□□□□□ -1.53
SRP40YKR092C HEM3P28789 327 aa5.52□□□□□ -1.53
SRP40YKR092C BOI2P39969 1040 aa5.52□□□□□ -1.53
SRP40YKR092C UFD2P54860 961 aa5.52□□□□□ -1.53
SRP40YKR092C TRS120Q04183 1289 aa5.52□□□□□ -1.53
SRP40YKR092C NUT2Q06213 157 aa5.52□□□□□ -1.53
SRP40YKR092C FRT1Q99332 602 aa5.52□□□□□ -1.53
SRP40YKR092C RGP1P16664 663 aa5.51□□□□□ -1.53
SRP40YKR092C RPC31P17890 251 aa5.51□□□□□ -1.53
SRP40YKR092C MSN1P22148 382 aa5.51□□□□□ -1.53
SRP40YKR092C KNS1P32350 737 aaPredicted RBP5.51□□□□□ -1.53
SRP40YKR092C SMC1P32908 1225 aa5.51□□□□□ -1.53
SRP40YKR092C KTR2P33550 425 aa5.51□□□□□ -1.53
SRP40YKR092C MCX1P38323 520 aaPredicted RBP5.51□□□□□ -1.53
SRP40YKR092C YBR287WP38355 427 aa5.51□□□□□ -1.53
SRP40YKR092C YRB30P53107 440 aaPredicted RBP5.51□□□□□ -1.53
SRP40YKR092C YCK2P23292 546 aaKnown RBP5.5□□□□□ -1.53
SRP40YKR092C ISW1P38144 1129 aa5.5□□□□□ -1.53
SRP40YKR092C GIP1P38229 639 aa5.5□□□□□ -1.53
SRP40YKR092C MSC7P38694 644 aa5.5□□□□□ -1.53
SRP40YKR092C THI12P42883 340 aa5.5□□□□□ -1.53
SRP40YKR092C THI5P43534 340 aa5.5□□□□□ -1.53
SRP40YKR092C THI11P47183 340 aa5.5□□□□□ -1.53
SRP40YKR092C SKP1P52286 194 aa5.5□□□□□ -1.53
SRP40YKR092C CUS1Q02554 436 aaPredicted RBP5.5□□□□□ -1.53
SRP40YKR092C THI13Q07748 340 aa5.5□□□□□ -1.53
SRP40YKR092C PPX1P38698 397 aa5.49□□□□□ -1.53
SRP40YKR092C RAD55P38953 406 aa5.49□□□□□ -1.53
SRP40YKR092C AIM44Q99299 758 aa5.49□□□□□ -1.53
SRP40YKR092C RPP1AP05318 106 aaPredicted RBP5.48□□□□□ -1.53
SRP40YKR092C NAB2P32505 525 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53 RIP-Chip
SRP40YKR092C MET1P36150 593 aa5.48□□□□□ -1.53
SRP40YKR092C BSD2P38356 321 aa5.48□□□□□ -1.53
SRP40YKR092C APM2P38700 605 aa5.48□□□□□ -1.53
SRP40YKR092C SLN1P39928 1220 aaPredicted RBP5.48□□□□□ -1.53
SRP40YKR092C YNL011CP53980 444 aa5.48□□□□□ -1.53
SRP40YKR092C YOR296WQ08748 1289 aa5.48□□□□□ -1.53
SRP40YKR092C MNL2Q12205 849 aa5.48□□□□□ -1.53
SRP40YKR092C NTA1P40354 457 aa5.47□□□□□ -1.53
SRP40YKR092C RGD2P43556 714 aa5.47□□□□□ -1.53
SRP40YKR092C YDR215CQ12240 137 aa5.47□□□□□ -1.53
SRP40YKR092C SBP1P10080 294 aaKnown RBP5.46□□□□□ -1.54
SRP40YKR092C NAP1P25293 417 aaKnown RBP5.46□□□□□ -1.54
SRP40YKR092C IRS4P36115 615 aaKnown RBP5.46□□□□□ -1.54
SRP40YKR092C NCL1P38205 684 aaKnown RBP5.46□□□□□ -1.54
SRP40YKR092C WHI5Q12416 295 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms