RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C GIS4Q04233 774 aa2.18□□□□□ -2.06
SET3YKR029C SUP45P12385 437 aaKnown RBP2.17□□□□□ -2.06
SET3YKR029C ATG3P40344 310 aa2.17□□□□□ -2.06
SET3YKR029C JJJ2P46997 583 aa2.17□□□□□ -2.06
SET3YKR029C ATG20Q07528 640 aa2.17□□□□□ -2.06
SET3YKR029C PSH1Q12161 406 aa2.17□□□□□ -2.06
SET3YKR029C DFG16Q99234 619 aa2.17□□□□□ -2.06
SET3YKR029C ALA1P40825 983 aaKnown RBP2.17□□□□□ -2.06
SET3YKR029C ENO2P00925 437 aaKnown RBP2.16□□□□□ -2.06
SET3YKR029C SSA1P10591 642 aaKnown RBP2.16□□□□□ -2.06
SET3YKR029C TEC1P18412 486 aa2.16□□□□□ -2.06
SET3YKR029C PDC6P26263 563 aaKnown RBP2.16□□□□□ -2.06
SET3YKR029C GUT2P32191 649 aa2.16□□□□□ -2.06
SET3YKR029C MRX12P47084 519 aa2.16□□□□□ -2.06
SET3YKR029C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SET3YKR029C YDJ1P25491 409 aaKnown RBP2.16□□□□□ -2.06
SET3YKR029C TTI1P36097 1038 aa2.16□□□□□ -2.06
SET3YKR029C STE20Q03497 939 aaKnown RBP2.16□□□□□ -2.06
SET3YKR029C ENO1P00924 437 aaKnown RBP2.15□□□□□ -2.06
SET3YKR029C SUB2Q07478 446 aaKnown RBP2.15□□□□□ -2.06
SET3YKR029C CPS1P27614 576 aa2.15□□□□□ -2.07
SET3YKR029C THI80P35202 319 aa2.15□□□□□ -2.07
SET3YKR029C SEA4P38164 1038 aa2.15□□□□□ -2.07
SET3YKR029C RIM21P48565 533 aa2.15□□□□□ -2.07
SET3YKR029C RPL34AP87262 121 aaPredicted RBP2.15□□□□□ -2.07
SET3YKR029C CDA2Q06703 312 aa2.15□□□□□ -2.07
SET3YKR029C GEF1P37020 779 aa2.14□□□□□ -2.07
SET3YKR029C AKR1P39010 764 aa2.14□□□□□ -2.07
SET3YKR029C EMP47P43555 445 aa2.14□□□□□ -2.07
SET3YKR029C MRX10Q05648 414 aa2.14□□□□□ -2.07
SET3YKR029C SHM1P37292 490 aaPredicted RBP2.14□□□□□ -2.07
SET3YKR029C YNR065CP53751 1116 aa2.13□□□□□ -2.07
SET3YKR029C PNS1Q12412 539 aa2.13□□□□□ -2.07
SET3YKR029C DAT1P13483 248 aaKnown RBP2.12□□□□□ -2.07
SET3YKR029C ISF1P32488 338 aa2.12□□□□□ -2.07
SET3YKR029C TGL4P36165 910 aa2.12□□□□□ -2.07
SET3YKR029C UTP13Q05946 817 aaKnown RBP2.12□□□□□ -2.07
SET3YKR029C NAM7P30771 971 aaKnown RBP2.12□□□□□ -2.07
SET3YKR029C KTR7P40504 517 aa2.12□□□□□ -2.07
SET3YKR029C SDH1Q00711 640 aa2.12□□□□□ -2.07
SET3YKR029C MSB1P21339 1137 aaKnown RBP2.11□□□□□ -2.07
SET3YKR029C PEP12P32854 288 aa2.11□□□□□ -2.07
SET3YKR029C SOH1P38633 127 aa2.11□□□□□ -2.07
SET3YKR029C YFL034WP43564 1073 aa2.11□□□□□ -2.07
SET3YKR029C GAL2P13181 574 aa2.11□□□□□ -2.07
SET3YKR029C HAP4P14064 554 aa2.11□□□□□ -2.07
SET3YKR029C PUP1P25043 261 aa2.11□□□□□ -2.07
SET3YKR029C CDC3P32457 520 aaKnown RBP2.11□□□□□ -2.07
SET3YKR029C UTP7P40055 554 aaKnown RBP2.11□□□□□ -2.07
SET3YKR029C PRK1P40494 810 aa2.11□□□□□ -2.07
SET3YKR029C YPR084WQ06821 456 aa2.11□□□□□ -2.07
SET3YKR029C RDS2P19541 446 aaKnown RBP2.1□□□□□ -2.07
SET3YKR029C PHO87P25360 923 aa2.1□□□□□ -2.07
SET3YKR029C ABZ1P37254 787 aaPredicted RBP2.1□□□□□ -2.07
SET3YKR029C ECM23Q02710 187 aa2.1□□□□□ -2.07
SET3YKR029C NOB1Q08444 459 aaKnown RBP2.1□□□□□ -2.07
SET3YKR029C YHL008CP38750 627 aa2.1□□□□□ -2.07
SET3YKR029C SLX8P40072 274 aa2.1□□□□□ -2.07
SET3YKR029C HEH2Q03281 663 aa2.1□□□□□ -2.07
SET3YKR029C SLD2P34252 453 aa2.09□□□□□ -2.07
SET3YKR029C TBS1P38114 1094 aa2.09□□□□□ -2.07
SET3YKR029C UBX7P38349 436 aa2.09□□□□□ -2.07
SET3YKR029C SUM1P46676 1062 aa2.09□□□□□ -2.07
SET3YKR029C APL6P46682 809 aa2.09□□□□□ -2.07
SET3YKR029C ISR1Q06098 443 aaKnown RBP2.09□□□□□ -2.07
SET3YKR029C GAS4Q08271 471 aa2.09□□□□□ -2.07
SET3YKR029C TSC13Q99190 310 aa2.09□□□□□ -2.07
SET3YKR029C VAN1P23642 535 aa2.08□□□□□ -2.08
SET3YKR029C TSA1P34760 196 aaKnown RBP2.08□□□□□ -2.08
SET3YKR029C PUF6Q04373 656 aaKnown RBP2.08□□□□□ -2.08
SET3YKR029C YML083CQ04526 418 aa2.08□□□□□ -2.08
SET3YKR029C SPT2P06843 333 aaPredicted RBP2.08□□□□□ -2.08
SET3YKR029C UTR2P32623 467 aa2.08□□□□□ -2.08
SET3YKR029C AIM9P40053 627 aaKnown RBP2.08□□□□□ -2.08
SET3YKR029C CWH41P53008 833 aa2.08□□□□□ -2.08
SET3YKR029C TRS33Q99394 268 aa2.08□□□□□ -2.08
SET3YKR029C LEU1P07264 779 aaKnown RBP2.07□□□□□ -2.08
SET3YKR029C PDI1P17967 522 aaKnown RBP2.07□□□□□ -2.08
SET3YKR029C ACS2P52910 683 aaKnown RBP2.07□□□□□ -2.08
SET3YKR029C YML020WQ03722 664 aa2.07□□□□□ -2.08
SET3YKR029C HDA3Q06623 655 aa2.07□□□□□ -2.08
SET3YKR029C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SET3YKR029C NTH2P35172 780 aa2.06□□□□□ -2.08
SET3YKR029C HAL5P38970 855 aaKnown RBP2.06□□□□□ -2.08
SET3YKR029C PUN1Q06991 263 aa2.06□□□□□ -2.08
SET3YKR029C CYT1P07143 309 aa2.06□□□□□ -2.08
SET3YKR029C RPS6AP0CX37 236 aaKnown RBP2.06□□□□□ -2.08
SET3YKR029C RPS6BP0CX38 236 aaPredicted RBP2.06□□□□□ -2.08
SET3YKR029C SRS2P12954 1174 aa2.06□□□□□ -2.08
SET3YKR029C PRP6P19735 899 aaPredicted RBP2.06□□□□□ -2.08
SET3YKR029C ROM1P53046 1155 aa2.06□□□□□ -2.08
SET3YKR029C KAR5Q04746 504 aa2.06□□□□□ -2.08
SET3YKR029C HAT1Q12341 374 aa2.06□□□□□ -2.08
SET3YKR029C RGP1P16664 663 aa2.05□□□□□ -2.08
SET3YKR029C RRN6P32786 894 aa2.05□□□□□ -2.08
SET3YKR029C NOP8Q08287 484 aaPredicted RBP2.05□□□□□ -2.08
SET3YKR029C TY1A-NL1Q12391 440 aaKnown RBP2.05□□□□□ -2.08
SET3YKR029C FUR4P05316 633 aaKnown RBP2.05□□□□□ -2.08
SET3YKR029C SWI5P08153 709 aa2.05□□□□□ -2.08
SET3YKR029C UBP1P25037 809 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms