RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W FBP1P09201 348 aa2.91□□□□□ -1.94
NUP100YKL068W RDS2P19541 446 aaKnown RBP2.91□□□□□ -1.94
NUP100YKL068W CLB5P30283 435 aa2.91□□□□□ -1.94
NUP100YKL068W MNN1P39106 762 aa2.91□□□□□ -1.94
NUP100YKL068W ERP2P39704 215 aa2.91□□□□□ -1.94
NUP100YKL068W MAD1P40957 749 aa2.91□□□□□ -1.94
NUP100YKL068W TY4A-JP47023 414 aa2.91□□□□□ -1.94
NUP100YKL068W SPR28Q04921 423 aa2.91□□□□□ -1.94
NUP100YKL068W NSE3Q05541 303 aa2.91□□□□□ -1.94
NUP100YKL068W BRE1Q07457 700 aaKnown RBP2.91□□□□□ -1.94
NUP100YKL068W YGR161W-CQ3E744 92 aa2.91□□□□□ -1.94
NUP100YKL068W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.9□□□□□ -1.94not detected
NUP100YKL068W MCM2P29469 868 aa2.9□□□□□ -1.94
NUP100YKL068W GRX7P38068 203 aa2.9□□□□□ -1.94
NUP100YKL068W BOL3P39724 118 aa2.9□□□□□ -1.94
NUP100YKL068W CWC15Q03772 175 aaKnown RBP2.9□□□□□ -1.94
NUP100YKL068W FRT1Q99332 602 aa2.9□□□□□ -1.94
NUP100YKL068W RRP5Q05022 1729 aaKnown RBP2.9□□□□□ -1.94
NUP100YKL068W STH1P32597 1359 aa2.9□□□□□ -1.94
NUP100YKL068W KAR1P11927 433 aa2.9□□□□□ -1.95
NUP100YKL068W MET4P32389 672 aa2.9□□□□□ -1.95
NUP100YKL068W ISW1P38144 1129 aa2.9□□□□□ -1.95
NUP100YKL068W YEN1P40028 759 aa2.9□□□□□ -1.95
NUP100YKL068W DNM1P54861 757 aa2.9□□□□□ -1.95
NUP100YKL068W NUT2Q06213 157 aa2.9□□□□□ -1.95
NUP100YKL068W CSC1Q06538 782 aa2.9□□□□□ -1.95
NUP100YKL068W WRS1Q12109 432 aaKnown RBP2.9□□□□□ -1.95
NUP100YKL068W SSF2Q12153 453 aaPredicted RBP2.9□□□□□ -1.95
NUP100YKL068W CTT1P06115 562 aa2.9□□□□□ -1.95
NUP100YKL068W GAL2P13181 574 aa2.9□□□□□ -1.95
NUP100YKL068W BUD6P41697 788 aa2.9□□□□□ -1.95
NUP100YKL068W YJL181WP46987 611 aa2.9□□□□□ -1.95
NUP100YKL068W MTO1P53070 669 aa2.9□□□□□ -1.95
NUP100YKL068W RPN4Q03465 531 aa2.9□□□□□ -1.95
NUP100YKL068W ROM2P51862 1356 aaKnown RBP2.9□□□□□ -1.95
NUP100YKL068W MNN4P36044 1178 aa2.89□□□□□ -1.95
NUP100YKL068W DCW1P36091 449 aa2.89□□□□□ -1.95
NUP100YKL068W GLO3P38682 493 aaKnown RBP2.89□□□□□ -1.95
NUP100YKL068W RPN11P43588 306 aaKnown RBP2.89□□□□□ -1.95
NUP100YKL068W VPS16Q03308 798 aa2.89□□□□□ -1.95
NUP100YKL068W MET6P05694 767 aaKnown RBP2.89□□□□□ -1.95
NUP100YKL068W YEF3P16521 1044 aaKnown RBP2.89□□□□□ -1.95
NUP100YKL068W ISF1P32488 338 aa2.89□□□□□ -1.95
NUP100YKL068W SEC6P32844 805 aa2.89□□□□□ -1.95
NUP100YKL068W YFR016CP43597 1233 aaKnown RBP2.89□□□□□ -1.95
NUP100YKL068W YPR109WQ06104 294 aa2.89□□□□□ -1.95
NUP100YKL068W MSB4Q12317 492 aa2.89□□□□□ -1.95
NUP100YKL068W YLL066CQ99208 1374 aa2.88□□□□□ -1.95
NUP100YKL068W SPT5P27692 1063 aaKnown RBP2.88□□□□□ -1.95
NUP100YKL068W WHI3P34761 661 aaKnown RBP2.88□□□□□ -1.95
NUP100YKL068W YEL023CP39992 682 aa2.88□□□□□ -1.95
NUP100YKL068W QDR1P40475 563 aa2.88□□□□□ -1.95
NUP100YKL068W ATG1P53104 897 aa2.88□□□□□ -1.95
NUP100YKL068W PNP1Q05788 311 aa2.88□□□□□ -1.95
NUP100YKL068W CDC73Q06697 393 aa2.88□□□□□ -1.95
NUP100YKL068W TFB4Q12004 338 aa2.88□□□□□ -1.95
NUP100YKL068W YOR131CQ12486 218 aa2.88□□□□□ -1.95
NUP100YKL068W HTA1P04911 132 aaKnown RBP2.88□□□□□ -1.95
NUP100YKL068W HTA2P04912 132 aa2.88□□□□□ -1.95
NUP100YKL068W STI1P15705 589 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95 RIP-Chip
NUP100YKL068W VMA4P22203 233 aaKnown RBP2.88□□□□□ -1.95
NUP100YKL068W PTC4P38089 393 aa2.88□□□□□ -1.95
NUP100YKL068W FUI1P38196 639 aa2.88□□□□□ -1.95
NUP100YKL068W GSC2P40989 1895 aa2.88□□□□□ -1.95
NUP100YKL068W PEP7P32609 515 aa2.87□□□□□ -1.95
NUP100YKL068W UBP12P39538 1254 aa2.87□□□□□ -1.95
NUP100YKL068W BOI2P39969 1040 aa2.87□□□□□ -1.95
NUP100YKL068W GIR2Q03768 265 aaPredicted RBP2.87□□□□□ -1.95
NUP100YKL068W RGA2Q06407 1009 aa2.87□□□□□ -1.95
NUP100YKL068W BDF2Q07442 638 aa2.87□□□□□ -1.95
NUP100YKL068W PIN2Q12057 282 aa2.87□□□□□ -1.95
NUP100YKL068W HIF1Q12373 385 aa2.87□□□□□ -1.95
NUP100YKL068W TRX2P22803 104 aaKnown RBP2.87□□□□□ -1.95
NUP100YKL068W TOA1P32773 286 aa2.87□□□□□ -1.95
NUP100YKL068W YER156CP40093 338 aaKnown RBP2.87□□□□□ -1.95
NUP100YKL068W SET4P42948 560 aa2.87□□□□□ -1.95
NUP100YKL068W PUF6Q04373 656 aaKnown RBP2.87□□□□□ -1.95
NUP100YKL068W TMA64Q04600 565 aaKnown RBP2.87□□□□□ -1.95
NUP100YKL068W FUR4P05316 633 aaKnown RBP2.86□□□□□ -1.95
NUP100YKL068W MIP1P15801 1254 aa2.86□□□□□ -1.95
NUP100YKL068W PRP40P33203 583 aaKnown RBP2.86□□□□□ -1.95
NUP100YKL068W RPT1P33299 467 aaKnown RBP2.86□□□□□ -1.95
NUP100YKL068W RPT2P40327 437 aaKnown RBP2.86□□□□□ -1.95
NUP100YKL068W FOL1P53848 824 aa2.86□□□□□ -1.95
NUP100YKL068W ZDS2P54786 942 aa2.86□□□□□ -1.95
NUP100YKL068W ENT2Q05785 613 aa2.86□□□□□ -1.95
NUP100YKL068W MCM16Q12262 181 aa2.86□□□□□ -1.95
NUP100YKL068W MHP1P43638 1398 aa2.86□□□□□ -1.95
NUP100YKL068W BOI1P38041 980 aaKnown RBP2.86□□□□□ -1.95
NUP100YKL068W NUP82P40368 713 aa2.86□□□□□ -1.95
NUP100YKL068W MSH4P40965 878 aaPredicted RBP2.86□□□□□ -1.95
NUP100YKL068W HUL5P53119 910 aa2.86□□□□□ -1.95
NUP100YKL068W CWC24P53769 259 aa2.86□□□□□ -1.95
NUP100YKL068W FOX2Q02207 900 aaKnown RBP2.86□□□□□ -1.95
NUP100YKL068W COG4Q06096 861 aa2.86□□□□□ -1.95
NUP100YKL068W PUN1Q06991 263 aa2.86□□□□□ -1.95
NUP100YKL068W YBL029C-AQ3E756 94 aa2.86□□□□□ -1.95
NUP100YKL068W YLR278CQ05854 1341 aa2.86□□□□□ -1.95
NUP100YKL068W RAD2P07276 1031 aa2.86□□□□□ -1.95
NUP100YKL068W TIM23P32897 222 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms