RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W YDR215CQ12240 137 aa4.43□□□□□ -1.7
MSL1YIR009W TRS33Q99394 268 aa4.42□□□□□ -1.7
MSL1YIR009W CPS1P27614 576 aa4.41□□□□□ -1.7
MSL1YIR009W NCL1P38205 684 aaKnown RBP4.41□□□□□ -1.7
MSL1YIR009W PRK1P40494 810 aa4.41□□□□□ -1.7
MSL1YIR009W CAB1Q04430 367 aa4.41□□□□□ -1.7
MSL1YIR009W PUP1P25043 261 aa4.4□□□□□ -1.71
MSL1YIR009W UBX7P38349 436 aa4.4□□□□□ -1.71
MSL1YIR009W APM2P38700 605 aa4.4□□□□□ -1.71
MSL1YIR009W SLN1P39928 1220 aaPredicted RBP4.4□□□□□ -1.71
MSL1YIR009W QDR2P40474 542 aa4.4□□□□□ -1.71
MSL1YIR009W CWH41P53008 833 aa4.4□□□□□ -1.71
MSL1YIR009W YNR040WP53736 256 aa4.4□□□□□ -1.71
MSL1YIR009W MRPL33P20084 86 aa4.38□□□□□ -1.71
MSL1YIR009W PGM2P37012 569 aaKnown RBP4.38□□□□□ -1.71
MSL1YIR009W NAR1P23503 491 aaKnown RBP4.37□□□□□ -1.71
MSL1YIR009W VMA3P25515 160 aa4.37□□□□□ -1.71
MSL1YIR009W NAB2P32505 525 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71 RIP-Chip
MSL1YIR009W ALG14P38242 237 aa4.37□□□□□ -1.71
MSL1YIR009W YBR197CP38306 217 aa4.37□□□□□ -1.71
MSL1YIR009W TPS3P38426 1054 aaKnown RBP4.37□□□□□ -1.71
MSL1YIR009W PRY1P47032 299 aa4.37□□□□□ -1.71
MSL1YIR009W GIS4Q04233 774 aa4.37□□□□□ -1.71
MSL1YIR009W MCA1Q08601 432 aa4.37□□□□□ -1.71
MSL1YIR009W NHA1Q99271 985 aa4.37□□□□□ -1.71
MSL1YIR009W TAT1P38085 619 aa4.36□□□□□ -1.71
MSL1YIR009W AMN1P38285 549 aaPredicted RBP4.36□□□□□ -1.71
MSL1YIR009W ITC1P53125 1264 aa4.36□□□□□ -1.71
MSL1YIR009W FOX2Q02207 900 aaKnown RBP4.36□□□□□ -1.71
MSL1YIR009W YOR296WQ08748 1289 aa4.36□□□□□ -1.71
MSL1YIR009W IDI1P15496 288 aa4.35□□□□□ -1.71
MSL1YIR009W DYS1P38791 387 aa4.35□□□□□ -1.71
MSL1YIR009W YER156CP40093 338 aaKnown RBP4.35□□□□□ -1.71
MSL1YIR009W LSB6P42951 607 aa4.35□□□□□ -1.71
MSL1YIR009W ALD4P46367 519 aaKnown RBP4.35□□□□□ -1.71
MSL1YIR009W PUF6Q04373 656 aaKnown RBP4.35□□□□□ -1.71
MSL1YIR009W MRP10O75012 95 aa4.34□□□□□ -1.71
MSL1YIR009W SBP1P10080 294 aaKnown RBP4.34□□□□□ -1.71
MSL1YIR009W BSD2P38356 321 aa4.34□□□□□ -1.71
MSL1YIR009W BUD9P53226 547 aa4.34□□□□□ -1.71
MSL1YIR009W ISC10P32645 267 aa4.33□□□□□ -1.72
MSL1YIR009W LDH1P38139 375 aa4.33□□□□□ -1.72
MSL1YIR009W GIP1P38229 639 aa4.33□□□□□ -1.72
MSL1YIR009W YML083CQ04526 418 aa4.33□□□□□ -1.72
MSL1YIR009W PUN1Q06991 263 aa4.33□□□□□ -1.72
MSL1YIR009W NOB1Q08444 459 aaKnown RBP4.33□□□□□ -1.72
MSL1YIR009W SRS2P12954 1174 aa4.32□□□□□ -1.72
MSL1YIR009W SSA4P22202 642 aaKnown RBP4.32□□□□□ -1.72
MSL1YIR009W NRD1P53617 575 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
MSL1YIR009W YPL034WQ03083 165 aa4.32□□□□□ -1.72
MSL1YIR009W CWC15Q03772 175 aaKnown RBP4.32□□□□□ -1.72
MSL1YIR009W AI3P03877 415 aa4.3□□□□□ -1.72
MSL1YIR009W MSN1P22148 382 aa4.3□□□□□ -1.72
MSL1YIR009W ISW1P38144 1129 aa4.3□□□□□ -1.72
MSL1YIR009W RRM3P38766 723 aa4.3□□□□□ -1.72
MSL1YIR009W SLP1Q12232 587 aa4.3□□□□□ -1.72
MSL1YIR009W YIL165CP40446 119 aa4.29□□□□□ -1.72
MSL1YIR009W GAS5Q08193 484 aa4.29□□□□□ -1.72
MSL1YIR009W SFA1P32771 386 aa4.28□□□□□ -1.72
MSL1YIR009W RSC2Q06488 889 aa4.28□□□□□ -1.72
MSL1YIR009W TY4B-PA0A0B7P3V8 1104 aa4.27□□□□□ -1.73
MSL1YIR009W SAC7P17121 654 aa4.27□□□□□ -1.73
MSL1YIR009W PGM1P33401 570 aaKnown RBP4.27□□□□□ -1.73
MSL1YIR009W KTR2P33550 425 aa4.27□□□□□ -1.73
MSL1YIR009W PPT1P53043 513 aa4.27□□□□□ -1.73
MSL1YIR009W PNP1Q05788 311 aa4.27□□□□□ -1.73
MSL1YIR009W TY4A-HQ6Q5P6 413 aa4.27□□□□□ -1.73
MSL1YIR009W BOI1P38041 980 aaKnown RBP4.26□□□□□ -1.73
MSL1YIR009W GIP2P40036 548 aa4.26□□□□□ -1.73
MSL1YIR009W TED1P40533 473 aa4.26□□□□□ -1.73
MSL1YIR009W HXT8P40886 569 aa4.26□□□□□ -1.73
MSL1YIR009W ARI1P53111 347 aaKnown RBP4.26□□□□□ -1.73
MSL1YIR009W TAF7Q05021 590 aa4.26□□□□□ -1.73
MSL1YIR009W EMG1Q06287 252 aaKnown RBP4.26□□□□□ -1.73
MSL1YIR009W APC11Q12157 165 aa4.26□□□□□ -1.73
MSL1YIR009W YJL181WP46987 611 aa4.25□□□□□ -1.73
MSL1YIR009W SOK2P53438 785 aaPredicted RBP4.25□□□□□ -1.73
MSL1YIR009W RRN6P32786 894 aa4.24□□□□□ -1.73
MSL1YIR009W FIR1P40020 876 aa4.24□□□□□ -1.73
MSL1YIR009W INP51P40559 946 aaKnown RBP4.24□□□□□ -1.73
MSL1YIR009W RGD2P43556 714 aa4.24□□□□□ -1.73
MSL1YIR009W LSO1Q3E827 93 aa4.24□□□□□ -1.73
MSL1YIR009W TFA2P36145 328 aa4.23□□□□□ -1.73
MSL1YIR009W YBR287WP38355 427 aa4.23□□□□□ -1.73
MSL1YIR009W NTA1P40354 457 aa4.23□□□□□ -1.73
MSL1YIR009W SUT1P53032 299 aaKnown RBP4.23□□□□□ -1.73
MSL1YIR009W BIO5P53744 561 aaKnown RBP4.23□□□□□ -1.73
MSL1YIR009W ALD3P54114 506 aa4.23□□□□□ -1.73
MSL1YIR009W SUB2Q07478 446 aaKnown RBP4.23□□□□□ -1.73
MSL1YIR009W TY1A-NL1Q12391 440 aaKnown RBP4.23□□□□□ -1.73
MSL1YIR009W RPB10P22139 70 aa4.22□□□□□ -1.73
MSL1YIR009W RSC6P25632 483 aa4.22□□□□□ -1.73
MSL1YIR009W AIM46P38885 310 aa4.22□□□□□ -1.73
MSL1YIR009W ALO1P54783 526 aaKnown RBP4.22□□□□□ -1.73
MSL1YIR009W SOG2Q08817 791 aa4.22□□□□□ -1.73
MSL1YIR009W MAC1P35192 417 aa4.21□□□□□ -1.74
MSL1YIR009W BOL3P39724 118 aa4.21□□□□□ -1.74
MSL1YIR009W INP52P50942 1183 aa4.21□□□□□ -1.74
MSL1YIR009W GUP1P53154 560 aa4.21□□□□□ -1.74
MSL1YIR009W DSE4P53753 1117 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms