RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W ENV9Q08651 330 aa6.06□□□□□ -1.44
NMD3YHR170W APP1P53933 587 aa6.05□□□□□ -1.44
NMD3YHR170W IOC4Q04213 475 aa6.05□□□□□ -1.44
NMD3YHR170W SPE2P21182 396 aa6.04□□□□□ -1.44
NMD3YHR170W TGL4P36165 910 aa6.04□□□□□ -1.44
NMD3YHR170W SOH1P38633 127 aa6.04□□□□□ -1.44
NMD3YHR170W HAL5P38970 855 aaKnown RBP6.04□□□□□ -1.44
NMD3YHR170W EMW1P42842 904 aaKnown RBP6.04□□□□□ -1.44
NMD3YHR170W HED1Q03937 162 aa6.04□□□□□ -1.44
NMD3YHR170W MLP1Q02455 1875 aaKnown RBP6.03□□□□□ -1.44
NMD3YHR170W KTR7P40504 517 aa6.03□□□□□ -1.44
NMD3YHR170W YML083CQ04526 418 aa6.03□□□□□ -1.44
NMD3YHR170W TY1B-NL2Q99337 1749 aaKnown RBP6.03□□□□□ -1.44
NMD3YHR170W MRT4P33201 236 aaKnown RBP6.02□□□□□ -1.45
NMD3YHR170W SIS2P36024 562 aa6.02□□□□□ -1.45
NMD3YHR170W MHP1P43638 1398 aa6.02□□□□□ -1.45
NMD3YHR170W CFT1Q06632 1357 aaKnown RBP6.02□□□□□ -1.45
NMD3YHR170W AIR1P40507 360 aaKnown RBP6.01□□□□□ -1.45
NMD3YHR170W YML020WQ03722 664 aa6.01□□□□□ -1.45
NMD3YHR170W UTP13Q05946 817 aaKnown RBP6.01□□□□□ -1.45
NMD3YHR170W DPS1P04802 557 aaKnown RBP6.01□□□□□ -1.45
NMD3YHR170W ISR1Q06098 443 aaKnown RBP6.01□□□□□ -1.45
NMD3YHR170W ATG20Q07528 640 aa6.01□□□□□ -1.45
NMD3YHR170W MET32Q12041 191 aa6.01□□□□□ -1.45
NMD3YHR170W SPT7P35177 1332 aa6.01□□□□□ -1.45
NMD3YHR170W ATG3P40344 310 aa5.99□□□□□ -1.45
NMD3YHR170W SSA1P10591 642 aaKnown RBP5.98□□□□□ -1.45
NMD3YHR170W GAL2P13181 574 aa5.98□□□□□ -1.45
NMD3YHR170W YNR029CP53729 429 aaKnown RBP5.98□□□□□ -1.45
NMD3YHR170W RCM1P53972 490 aa5.98□□□□□ -1.45
NMD3YHR170W ECM23Q02710 187 aa5.98□□□□□ -1.45
NMD3YHR170W PPH3P32345 308 aa5.97□□□□□ -1.45
NMD3YHR170W YBL086CP38177 466 aa5.97□□□□□ -1.45
NMD3YHR170W CHZ1P40019 153 aaPredicted RBP5.97□□□□□ -1.45
NMD3YHR170W PDS5Q04264 1277 aa5.97□□□□□ -1.45
NMD3YHR170W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
NMD3YHR170W THI12P42883 340 aa5.97□□□□□ -1.45
NMD3YHR170W THI5P43534 340 aa5.97□□□□□ -1.45
NMD3YHR170W THI11P47183 340 aa5.97□□□□□ -1.45
NMD3YHR170W ACS2P52910 683 aaKnown RBP5.97□□□□□ -1.45
NMD3YHR170W HDA3Q06623 655 aa5.97□□□□□ -1.45
NMD3YHR170W THI13Q07748 340 aa5.97□□□□□ -1.45
NMD3YHR170W CDC4P07834 779 aa5.96□□□□□ -1.46
NMD3YHR170W MKS1P34072 584 aa5.96□□□□□ -1.46
NMD3YHR170W ISU1Q03020 165 aa5.96□□□□□ -1.46
NMD3YHR170W TY4B-HP0C2J7 1802 aa5.96□□□□□ -1.46
NMD3YHR170W TY4B-JP47024 1803 aa5.96□□□□□ -1.46
NMD3YHR170W YML133CQ03099 1374 aa5.95□□□□□ -1.46
NMD3YHR170W YLL067CQ07888 1374 aa5.95□□□□□ -1.46
NMD3YHR170W YLL066CQ99208 1374 aa5.95□□□□□ -1.46
NMD3YHR170W PHO87P25360 923 aa5.95□□□□□ -1.46
NMD3YHR170W FBP26P32604 452 aa5.95□□□□□ -1.46
NMD3YHR170W MIP1P15801 1254 aa5.94□□□□□ -1.46
NMD3YHR170W PDI1P17967 522 aaKnown RBP5.94□□□□□ -1.46
NMD3YHR170W GEF1P37020 779 aa5.94□□□□□ -1.46
NMD3YHR170W SLX8P40072 274 aa5.94□□□□□ -1.46
NMD3YHR170W DFG5Q05031 458 aa5.94□□□□□ -1.46
NMD3YHR170W SEC3P33332 1336 aaKnown RBP5.94□□□□□ -1.46
NMD3YHR170W STE6P12866 1290 aa5.93□□□□□ -1.46
NMD3YHR170W ROM1P53046 1155 aa5.93□□□□□ -1.46
NMD3YHR170W TSC13Q99190 310 aa5.93□□□□□ -1.46
NMD3YHR170W SPT2P06843 333 aaPredicted RBP5.93□□□□□ -1.46
NMD3YHR170W ASH1P34233 588 aa5.93□□□□□ -1.46
NMD3YHR170W UBX7P38349 436 aa5.93□□□□□ -1.46
NMD3YHR170W PSK1P31374 1356 aa5.92□□□□□ -1.46
NMD3YHR170W HAP4P14064 554 aa5.91□□□□□ -1.46
NMD3YHR170W AFT1P22149 690 aa5.91□□□□□ -1.46
NMD3YHR170W AIM9P40053 627 aaKnown RBP5.91□□□□□ -1.46
NMD3YHR170W SRC1Q03707 834 aa5.91□□□□□ -1.46
NMD3YHR170W NOP8Q08287 484 aaPredicted RBP5.9□□□□□ -1.46
NMD3YHR170W YIL177CP40434 1758 aa5.9□□□□□ -1.47
NMD3YHR170W YJL225CP40889 1758 aa5.9□□□□□ -1.47
NMD3YHR170W UTR2P32623 467 aa5.89□□□□□ -1.47
NMD3YHR170W NTH2P35172 780 aa5.89□□□□□ -1.47
NMD3YHR170W WTM2Q12206 467 aa5.89□□□□□ -1.47
NMD3YHR170W MSB3P48566 633 aaPredicted RBP5.89□□□□□ -1.47
NMD3YHR170W BDS1Q08347 646 aa5.89□□□□□ -1.47
NMD3YHR170W SWI5P08153 709 aa5.88□□□□□ -1.47
NMD3YHR170W TRK1P12685 1235 aa5.88□□□□□ -1.47
NMD3YHR170W DAT1P13483 248 aaKnown RBP5.88□□□□□ -1.47
NMD3YHR170W YEF3P16521 1044 aaKnown RBP5.88□□□□□ -1.47
NMD3YHR170W ENP1P38333 483 aaKnown RBP5.88□□□□□ -1.47
NMD3YHR170W TPS3P38426 1054 aaKnown RBP5.88□□□□□ -1.47
NMD3YHR170W GAS4Q08271 471 aa5.88□□□□□ -1.47
NMD3YHR170W RPS6AP0CX37 236 aaKnown RBP5.87□□□□□ -1.47
NMD3YHR170W RPS6BP0CX38 236 aaPredicted RBP5.87□□□□□ -1.47
NMD3YHR170W UGA3P26370 528 aa5.87□□□□□ -1.47
NMD3YHR170W SCT1P32784 759 aa5.87□□□□□ -1.47
NMD3YHR170W YFL034WP43564 1073 aa5.87□□□□□ -1.47
NMD3YHR170W HST3P53687 447 aa5.87□□□□□ -1.47
NMD3YHR170W RPL34AP87262 121 aaPredicted RBP5.87□□□□□ -1.47
NMD3YHR170W CWC15Q03772 175 aaKnown RBP5.87□□□□□ -1.47
NMD3YHR170W RPS24AP0CX31 135 aaKnown RBP5.86□□□□□ -1.47
NMD3YHR170W RPS24BP0CX32 135 aaKnown RBP5.86□□□□□ -1.47
NMD3YHR170W RRP5Q05022 1729 aaKnown RBP5.86□□□□□ -1.47
NMD3YHR170W LEU2P04173 364 aaPredicted RBP5.85□□□□□ -1.47
NMD3YHR170W YJR115WP47152 169 aa5.85□□□□□ -1.47
NMD3YHR170W ADE6P38972 1358 aaKnown RBP5.85□□□□□ -1.47
NMD3YHR170W SUV3P32580 737 aa5.84□□□□□ -1.47
NMD3YHR170W HIM1Q06674 414 aa5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms