RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W TCD1P38756 429 aa6.68□□□□□ -1.34
SKN1YGR143W NMD3P38861 518 aaKnown RBP6.68□□□□□ -1.34
SKN1YGR143W NDC80P40460 691 aa6.68□□□□□ -1.34
SKN1YGR143W YJR008WP47085 338 aa6.68□□□□□ -1.34
SKN1YGR143W ALD2P47771 506 aa6.68□□□□□ -1.34
SKN1YGR143W CCM1P48237 864 aaPredicted RBP6.68□□□□□ -1.34
SKN1YGR143W HST2P53686 357 aa6.68□□□□□ -1.34
SKN1YGR143W LSO1Q3E827 93 aa6.68□□□□□ -1.34
SKN1YGR143W SEC6P32844 805 aa6.67□□□□□ -1.34
SKN1YGR143W XKS1P42826 600 aa6.67□□□□□ -1.34
SKN1YGR143W FAR11P53917 953 aa6.67□□□□□ -1.34
SKN1YGR143W YNL050CP53952 270 aa6.67□□□□□ -1.34
SKN1YGR143W DNM1P54861 757 aa6.67□□□□□ -1.34
SKN1YGR143W GAS4Q08271 471 aa6.67□□□□□ -1.34
SKN1YGR143W SWI6P09959 803 aa6.67□□□□□ -1.34
SKN1YGR143W OLA1P38219 394 aaKnown RBP6.67□□□□□ -1.34
SKN1YGR143W HOS2P53096 452 aaPredicted RBP6.67□□□□□ -1.34
SKN1YGR143W VTC3Q02725 835 aa6.67□□□□□ -1.34
SKN1YGR143W YMR102CQ03177 834 aa6.67□□□□□ -1.34
SKN1YGR143W ATG26Q06321 1198 aa6.67□□□□□ -1.34
SKN1YGR143W DPS1P04802 557 aaKnown RBP6.66□□□□□ -1.34
SKN1YGR143W SEC23P15303 768 aaKnown RBP6.66□□□□□ -1.34
SKN1YGR143W DPH5P32469 300 aaPredicted RBP6.66□□□□□ -1.34
SKN1YGR143W SEC26P41810 973 aaKnown RBP6.66□□□□□ -1.34
SKN1YGR143W YGL140CP53120 1219 aa6.66□□□□□ -1.34
SKN1YGR143W ROM2P51862 1356 aaKnown RBP6.66□□□□□ -1.34
SKN1YGR143W AUS1Q08409 1394 aa6.66□□□□□ -1.34
SKN1YGR143W RAD16P31244 790 aa6.66□□□□□ -1.34
SKN1YGR143W RPG1P38249 964 aaKnown RBP6.66□□□□□ -1.34
SKN1YGR143W TOM71P38825 639 aaKnown RBP6.66□□□□□ -1.34
SKN1YGR143W BNI5P53890 448 aaKnown RBP6.65□□□□□ -1.34
SKN1YGR143W YML119WQ03208 357 aa6.65□□□□□ -1.34
SKN1YGR143W APC2Q12440 853 aa6.65□□□□□ -1.34
SKN1YGR143W KDX1P36005 433 aa6.65□□□□□ -1.35
SKN1YGR143W YKL133CP36066 463 aa6.65□□□□□ -1.35
SKN1YGR143W VPS24P36095 224 aaKnown RBP6.65□□□□□ -1.35
SKN1YGR143W SSF1P38789 453 aaPredicted RBP6.65□□□□□ -1.35
SKN1YGR143W VPS27P40343 622 aaKnown RBP6.65□□□□□ -1.35
SKN1YGR143W MPH1P40562 993 aa6.65□□□□□ -1.35
SKN1YGR143W YNL247WP53852 767 aaKnown RBP6.65□□□□□ -1.35
SKN1YGR143W TIM11P81449 96 aaPredicted RBP6.65□□□□□ -1.35
SKN1YGR143W GIR2Q03768 265 aaPredicted RBP6.65□□□□□ -1.35
SKN1YGR143W MHP1P43638 1398 aa6.64□□□□□ -1.35
SKN1YGR143W THR4P16120 514 aaKnown RBP6.64□□□□□ -1.35
SKN1YGR143W PDI1P17967 522 aaKnown RBP6.64□□□□□ -1.35
SKN1YGR143W ELM1P32801 640 aa6.64□□□□□ -1.35
SKN1YGR143W NPR2P39923 615 aa6.64□□□□□ -1.35
SKN1YGR143W GYP7P48365 746 aa6.64□□□□□ -1.35
SKN1YGR143W YDR338CQ05497 695 aa6.64□□□□□ -1.35
SKN1YGR143W RSC2Q06488 889 aa6.64□□□□□ -1.35
SKN1YGR143W WHI5Q12416 295 aa6.64□□□□□ -1.35
SKN1YGR143W GAL11P19659 1081 aa6.64□□□□□ -1.35
SKN1YGR143W PSD2P53037 1138 aaKnown RBP6.64□□□□□ -1.35
SKN1YGR143W HOS3Q02959 697 aaKnown RBP6.64□□□□□ -1.35
SKN1YGR143W HIM1Q06674 414 aa6.64□□□□□ -1.35
SKN1YGR143W COBP00163 385 aa6.63□□□□□ -1.35
SKN1YGR143W YEF3P16521 1044 aaKnown RBP6.63□□□□□ -1.35
SKN1YGR143W MAK11P20484 414 aaKnown RBP6.63□□□□□ -1.35
SKN1YGR143W SCT1P32784 759 aa6.63□□□□□ -1.35
SKN1YGR143W EXO84P38261 753 aa6.63□□□□□ -1.35
SKN1YGR143W BTN2P53286 410 aa6.63□□□□□ -1.35
SKN1YGR143W PDS5Q04264 1277 aa6.63□□□□□ -1.35
SKN1YGR143W NKP1Q12493 238 aa6.63□□□□□ -1.35
SKN1YGR143W RAD50P12753 1312 aa6.63□□□□□ -1.35
SKN1YGR143W YRF1-4O13559 1382 aa6.63□□□□□ -1.35
SKN1YGR143W INP52P50942 1183 aa6.62□□□□□ -1.35
SKN1YGR143W ESC2Q06340 456 aa6.62□□□□□ -1.35
SKN1YGR143W SNF2P22082 1703 aa6.62□□□□□ -1.35
SKN1YGR143W TIF3P34167 436 aaKnown RBP6.62□□□□□ -1.35
SKN1YGR143W EFM2P38347 419 aa6.62□□□□□ -1.35
SKN1YGR143W LYS4P49367 693 aaPredicted RBP6.62□□□□□ -1.35
SKN1YGR143W SPO19Q03029 223 aa6.62□□□□□ -1.35
SKN1YGR143W BRR1Q99177 341 aaPredicted RBP6.62□□□□□ -1.35
SKN1YGR143W YKR075CP36155 307 aa6.61□□□□□ -1.35
SKN1YGR143W RCR1P38212 213 aa6.61□□□□□ -1.35
SKN1YGR143W RTF1P53064 558 aa6.61□□□□□ -1.35
SKN1YGR143W ARO80Q04052 950 aa6.61□□□□□ -1.35
SKN1YGR143W AVO1Q08236 1176 aa6.61□□□□□ -1.35
SKN1YGR143W RUD3Q12234 484 aaKnown RBP6.61□□□□□ -1.35
SKN1YGR143W EFB1P32471 206 aaKnown RBP6.61□□□□□ -1.35
SKN1YGR143W YLF2P38746 405 aa6.61□□□□□ -1.35
SKN1YGR143W SUM1P46676 1062 aa6.61□□□□□ -1.35
SKN1YGR143W SHE4P51534 789 aa6.61□□□□□ -1.35
SKN1YGR143W SML1Q04964 104 aa6.61□□□□□ -1.35
SKN1YGR143W MRD1Q06106 887 aaKnown RBP6.61□□□□□ -1.35
SKN1YGR143W TFB4Q12004 338 aa6.61□□□□□ -1.35
SKN1YGR143W HSP42Q12329 375 aa6.61□□□□□ -1.35
SKN1YGR143W CMP2P14747 604 aa6.6□□□□□ -1.35
SKN1YGR143W FAR1P21268 830 aa6.6□□□□□ -1.35
SKN1YGR143W HXT5P38695 592 aa6.6□□□□□ -1.35
SKN1YGR143W YRB1P41920 201 aaKnown RBP6.6□□□□□ -1.35
SKN1YGR143W YNL035CP53962 389 aaKnown RBP6.6□□□□□ -1.35
SKN1YGR143W REX2P54964 269 aaKnown RBP6.6□□□□□ -1.35
SKN1YGR143W MRS2Q01926 470 aa6.6□□□□□ -1.35
SKN1YGR143W FRK1Q03002 865 aaPredicted RBP6.6□□□□□ -1.35
SKN1YGR143W MSH6Q03834 1242 aa6.6□□□□□ -1.35
SKN1YGR143W TAP42Q04372 366 aa6.6□□□□□ -1.35
SKN1YGR143W JIP5Q06214 492 aaPredicted RBP6.6□□□□□ -1.35
SKN1YGR143W CDC31P06704 161 aaKnown RBP6.6□□□□□ -1.35
SKN1YGR143W MRF1P30775 413 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms