RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT6	YGR116W	NNF2	P53253	936 aa		4.15	□□□□□ -1.74
SPT6	YGR116W	MAL13	P53338	473 aa		4.15	□□□□□ -1.74
SPT6	YGR116W	RPO26	P20435	155 aa		4.15	□□□□□ -1.75
SPT6	YGR116W	SSF1	P38789	453 aa	Predicted RBP	4.15	□□□□□ -1.75
SPT6	YGR116W	AIM9	P40053	627 aa	Known RBP	4.15	□□□□□ -1.75
SPT6	YGR116W	YPT11	P48559	417 aa		4.15	□□□□□ -1.75
SPT6	YGR116W	MLC1	P53141	149 aa		4.15	□□□□□ -1.75
SPT6	YGR116W	CTF4	Q01454	927 aa		4.15	□□□□□ -1.75
SPT6	YGR116W	CPA2	P03965	1118 aa	Known RBP	4.15	□□□□□ -1.75
SPT6	YGR116W	ECM21	P38167	1117 aa	Known RBP	4.15	□□□□□ -1.75
SPT6	YGR116W	SIC1	P38634	284 aa		4.15	□□□□□ -1.75
SPT6	YGR116W	SRC1	Q03707	834 aa		4.15	□□□□□ -1.75
SPT6	YGR116W	COQ4	O13525	335 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	GPA1	P08539	472 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	PSE1	P32337	1089 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	YKE2	P52553	114 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	EIS1	Q05050	843 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	RPS24A	P0CX31	135 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	RPS24B	P0CX32	135 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	CDC11	P32458	415 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	REI1	P38344	393 aa	Predicted RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	YER130C	P39959	443 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	BOI2	P39969	1040 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	YGL082W	P53155	381 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	VPS75	P53853	264 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	OSH2	Q12451	1283 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	UBC1	P21734	215 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	RDS1	P25611	832 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	AAP1	P37898	856 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	BUD6	P41697	788 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	RMD1	Q03441	430 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	RRB1	Q04225	511 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	YOL057W	Q08225	711 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	YPL225W	Q08971	146 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	YPL150W	Q12152	901 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	CPS1	P27614	576 aa		4.14	□□□□□ -1.75
SPT6	YGR116W	STM1	P39015	273 aa	Known RBP	4.14	□□□□□ -1.75
SPT6	YGR116W	ADE6	P38972	1358 aa	Known RBP	4.13	□□□□□ -1.75
SPT6	YGR116W	PRP43	P53131	767 aa	Known RBP	4.13	□□□□□ -1.75
SPT6	YGR116W	YNL011C	P53980	444 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	VPS72	Q03388	795 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	GSY2	P27472	705 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	HCR1	Q05775	265 aa	Known RBP	4.13	□□□□□ -1.75
SPT6	YGR116W	TY4A-H	Q6Q5P6	413 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	CDC15	P27636	974 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	YGL242C	P53066	181 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	WAR1	Q03631	944 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	VMS1	Q04311	632 aa	Known RBP	4.13	□□□□□ -1.75
SPT6	YGR116W	ATG23	Q06671	453 aa		4.13	□□□□□ -1.75
SPT6	YGR116W	APC1	P53886	1748 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	SAP190	P36123	1033 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	ENT3	P47160	408 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	GYL1	Q04322	720 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	ATG9	Q12142	997 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	SMC6	Q12749	1114 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	RAD3	P06839	778 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	MUD2	P36084	527 aa	Known RBP	4.12	□□□□□ -1.75
SPT6	YGR116W	MAL33	P38157	468 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	RFT1	P38206	574 aa	Predicted RBP	4.12	□□□□□ -1.75
SPT6	YGR116W	MGA2	P40578	1113 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	VPS4	P52917	437 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	JIP3	O13555	125 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	HOS4	P40480	1083 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	ALF1	P53904	254 aa		4.12	□□□□□ -1.75
SPT6	YGR116W	RIM101	P33400	625 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	RFC5	P38251	354 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	VPS38	Q05919	439 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	MCM16	Q12262	181 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	KCC4	P25389	1037 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	SQT1	P35184	431 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	VPS8	P39702	1274 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	CTK3	P46963	296 aa	Predicted RBP	4.11	□□□□□ -1.75
SPT6	YGR116W	TOP1	P04786	769 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	RPL22A	P05749	121 aa	Known RBP	4.11	□□□□□ -1.75
SPT6	YGR116W	PGI1	P12709	554 aa	Known RBP	4.11	□□□□□ -1.75
SPT6	YGR116W	KTR1	P27810	393 aa	Known RBP	4.11	□□□□□ -1.75
SPT6	YGR116W	SAP1	P39955	897 aa	Known RBP	4.11	□□□□□ -1.75
SPT6	YGR116W	FAR11	P53917	953 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	STE23	Q06010	1027 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	KAR3	P17119	729 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	RGD1	P38339	666 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	PXA1	P41909	870 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	YOL098C	Q12496	1037 aa		4.11	□□□□□ -1.75
SPT6	YGR116W	OSH3	P38713	996 aa	Known RBP	4.1	□□□□□ -1.75
SPT6	YGR116W	FYV8	P46949	817 aa	Known RBP	4.1	□□□□□ -1.75
SPT6	YGR116W	ILM1	P47155	203 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	YGR122W	P53272	402 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	CAF130	P53280	1122 aa	Predicted RBP	4.1	□□□□□ -1.75
SPT6	YGR116W	DNM1	P54861	757 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	ESF1	Q06344	628 aa	Known RBP	4.1	□□□□□ -1.75
SPT6	YGR116W	RAD4	P14736	754 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	MBR1	P23493	339 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	CNS1	P33313	385 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	SEC14	P24280	304 aa	Known RBP	4.1	□□□□□ -1.75
SPT6	YGR116W	NUP133	P36161	1157 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	FYV10	P40492	516 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	CST6	P40535	587 aa		4.1	□□□□□ -1.75
SPT6	YGR116W	GFD1	Q04839	188 aa	Known RBP	4.1	□□□□□ -1.75
SPT6	YGR116W	DIP2	Q12220	943 aa	Predicted RBP	4.1	□□□□□ -1.75
SPT6	YGR116W	SUP35	P05453	685 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms