RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A SRS2P12954 1174 aa6.08□□□□□ -1.44
YGR109W-AYGR109W-A RPC31P17890 251 aa6.08□□□□□ -1.44
YGR109W-AYGR109W-A VMA3P25515 160 aa6.08□□□□□ -1.44
YGR109W-AYGR109W-A NSG2P53898 299 aa6.08□□□□□ -1.44
YGR109W-AYGR109W-A ISC10P32645 267 aa6.07□□□□□ -1.44
YGR109W-AYGR109W-A PDC5P16467 563 aaKnown RBP6.06□□□□□ -1.44
YGR109W-AYGR109W-A TPS3P38426 1054 aaKnown RBP6.06□□□□□ -1.44
YGR109W-AYGR109W-A YNR040WP53736 256 aa6.06□□□□□ -1.44
YGR109W-AYGR109W-A HEH2Q03281 663 aa6.06□□□□□ -1.44
YGR109W-AYGR109W-A PHM7Q12252 991 aa6.06□□□□□ -1.44
YGR109W-AYGR109W-A KNS1P32350 737 aaPredicted RBP6.05□□□□□ -1.44
YGR109W-AYGR109W-A NCL1P38205 684 aaKnown RBP6.05□□□□□ -1.44
YGR109W-AYGR109W-A APM2P38700 605 aa6.05□□□□□ -1.44
YGR109W-AYGR109W-A SBE2P42223 864 aaKnown RBP6.05□□□□□ -1.44
YGR109W-AYGR109W-A PNP1Q05788 311 aa6.05□□□□□ -1.44
YGR109W-AYGR109W-A NAB2P32505 525 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
YGR109W-AYGR109W-A DYS1P38791 387 aa6.04□□□□□ -1.44
YGR109W-AYGR109W-A LDH1P38139 375 aa6.03□□□□□ -1.44
YGR109W-AYGR109W-A PRK1P40494 810 aa6.03□□□□□ -1.44
YGR109W-AYGR109W-A PUS1Q12211 544 aaKnown RBP6.03□□□□□ -1.44
YGR109W-AYGR109W-A YOR296WQ08748 1289 aa6.02□□□□□ -1.45
YGR109W-AYGR109W-A ITC1P53125 1264 aa6.01□□□□□ -1.45
YGR109W-AYGR109W-A YNR014WP53719 212 aa6.01□□□□□ -1.45
YGR109W-AYGR109W-A TDA6Q06466 467 aa6.01□□□□□ -1.45
YGR109W-AYGR109W-A RRN6P32786 894 aa6□□□□□ -1.45
YGR109W-AYGR109W-A GIP1P38229 639 aa6□□□□□ -1.45
YGR109W-AYGR109W-A BSD2P38356 321 aa6□□□□□ -1.45
YGR109W-AYGR109W-A MET1P36150 593 aa5.99□□□□□ -1.45
YGR109W-AYGR109W-A BOI1P38041 980 aaKnown RBP5.99□□□□□ -1.45
YGR109W-AYGR109W-A BOI2P39969 1040 aa5.99□□□□□ -1.45
YGR109W-AYGR109W-A RPL34AP87262 121 aaPredicted RBP5.99□□□□□ -1.45
YGR109W-AYGR109W-A MSN1P22148 382 aa5.98□□□□□ -1.45
YGR109W-AYGR109W-A BOL3P39724 118 aa5.98□□□□□ -1.45
YGR109W-AYGR109W-A FUR4P05316 633 aaKnown RBP5.97□□□□□ -1.45
YGR109W-AYGR109W-A IDI1P15496 288 aa5.97□□□□□ -1.45
YGR109W-AYGR109W-A ISW1P38144 1129 aa5.97□□□□□ -1.45
YGR109W-AYGR109W-A MCX1P38323 520 aaPredicted RBP5.97□□□□□ -1.45
YGR109W-AYGR109W-A APC11Q12157 165 aa5.97□□□□□ -1.45
YGR109W-AYGR109W-A LSO1Q3E827 93 aa5.97□□□□□ -1.45
YGR109W-AYGR109W-A YPR053CQ6Q5F3 151 aa5.97□□□□□ -1.45
YGR109W-AYGR109W-A SSA1P10591 642 aaKnown RBP5.96□□□□□ -1.46
YGR109W-AYGR109W-A YER156CP40093 338 aaKnown RBP5.96□□□□□ -1.46
YGR109W-AYGR109W-A HXT8P40886 569 aa5.96□□□□□ -1.46
YGR109W-AYGR109W-A SUT1P53032 299 aaKnown RBP5.96□□□□□ -1.46
YGR109W-AYGR109W-A YMR187CQ03236 431 aa5.96□□□□□ -1.46
YGR109W-AYGR109W-A MRP10O75012 95 aa5.95□□□□□ -1.46
YGR109W-AYGR109W-A KTR2P33550 425 aa5.95□□□□□ -1.46
YGR109W-AYGR109W-A PGM2P37012 569 aaKnown RBP5.95□□□□□ -1.46
YGR109W-AYGR109W-A RPB10P22139 70 aa5.94□□□□□ -1.46
YGR109W-AYGR109W-A NAR1P23503 491 aaKnown RBP5.94□□□□□ -1.46
YGR109W-AYGR109W-A ALG14P38242 237 aa5.94□□□□□ -1.46
YGR109W-AYGR109W-A LSB3P43603 459 aaKnown RBP5.94□□□□□ -1.46
YGR109W-AYGR109W-A SKN7P38889 622 aa5.93□□□□□ -1.46
YGR109W-AYGR109W-A FIR1P40020 876 aa5.93□□□□□ -1.46
YGR109W-AYGR109W-A YIL165CP40446 119 aa5.93□□□□□ -1.46
YGR109W-AYGR109W-A RGD2P43556 714 aa5.93□□□□□ -1.46
YGR109W-AYGR109W-A GIS4Q04233 774 aa5.93□□□□□ -1.46
YGR109W-AYGR109W-A NHA1Q99271 985 aa5.93□□□□□ -1.46
YGR109W-AYGR109W-A YCK2P23292 546 aaKnown RBP5.92□□□□□ -1.46
YGR109W-AYGR109W-A KAR5Q04746 504 aa5.92□□□□□ -1.46
YGR109W-AYGR109W-A EMG1Q06287 252 aaKnown RBP5.92□□□□□ -1.46
YGR109W-AYGR109W-A YDR215CQ12240 137 aa5.92□□□□□ -1.46
YGR109W-AYGR109W-A YBR287WP38355 427 aa5.91□□□□□ -1.46
YGR109W-AYGR109W-A CCT8P47079 568 aaKnown RBP5.91□□□□□ -1.46
YGR109W-AYGR109W-A RSC2Q06488 889 aa5.91□□□□□ -1.46
YGR109W-AYGR109W-A AIM46P38885 310 aa5.9□□□□□ -1.46
YGR109W-AYGR109W-A SLN1P39928 1220 aaPredicted RBP5.9□□□□□ -1.46
YGR109W-AYGR109W-A PPT1P53043 513 aa5.9□□□□□ -1.46
YGR109W-AYGR109W-A GEF1P37020 779 aa5.89□□□□□ -1.47
YGR109W-AYGR109W-A RAD55P38953 406 aa5.89□□□□□ -1.47
YGR109W-AYGR109W-A NTA1P40354 457 aa5.89□□□□□ -1.47
YGR109W-AYGR109W-A YJL181WP46987 611 aa5.89□□□□□ -1.47
YGR109W-AYGR109W-A SMC1P32908 1225 aa5.88□□□□□ -1.47
YGR109W-AYGR109W-A GLO3P38682 493 aaKnown RBP5.88□□□□□ -1.47
YGR109W-AYGR109W-A PRY1P47032 299 aa5.88□□□□□ -1.47
YGR109W-AYGR109W-A TIF6Q12522 245 aaKnown RBP5.88□□□□□ -1.47
YGR109W-AYGR109W-A CDC3P32457 520 aaKnown RBP5.87□□□□□ -1.47
YGR109W-AYGR109W-A QDR1P40475 563 aa5.87□□□□□ -1.47
YGR109W-AYGR109W-A BUD9P53226 547 aa5.86□□□□□ -1.47
YGR109W-AYGR109W-A IRS4P36115 615 aaKnown RBP5.85□□□□□ -1.47
YGR109W-AYGR109W-A TAT1P38085 619 aa5.85□□□□□ -1.47
YGR109W-AYGR109W-A PSY2P40164 858 aa5.85□□□□□ -1.47
YGR109W-AYGR109W-A INP51P40559 946 aaKnown RBP5.85□□□□□ -1.47
YGR109W-AYGR109W-A ATG1P53104 897 aa5.85□□□□□ -1.47
YGR109W-AYGR109W-A SOK2P53438 785 aaPredicted RBP5.85□□□□□ -1.47
YGR109W-AYGR109W-A MCA1Q08601 432 aa5.85□□□□□ -1.47
YGR109W-AYGR109W-A SLP1Q12232 587 aa5.85□□□□□ -1.47
YGR109W-AYGR109W-A RRM3P38766 723 aa5.84□□□□□ -1.47
YGR109W-AYGR109W-A GIP2P40036 548 aa5.84□□□□□ -1.47
YGR109W-AYGR109W-A TED1P40533 473 aa5.84□□□□□ -1.47
YGR109W-AYGR109W-A TRL1P09880 827 aaKnown RBP5.83□□□□□ -1.48
YGR109W-AYGR109W-A ACF4P47129 309 aa5.83□□□□□ -1.48
YGR109W-AYGR109W-A BIO5P53744 561 aaKnown RBP5.83□□□□□ -1.48
YGR109W-AYGR109W-A ALD3P54114 506 aa5.83□□□□□ -1.48
YGR109W-AYGR109W-A GAS5Q08193 484 aa5.83□□□□□ -1.48
YGR109W-AYGR109W-A TY4B-PA0A0B7P3V8 1104 aa5.82□□□□□ -1.48
YGR109W-AYGR109W-A FUS1P11710 512 aa5.82□□□□□ -1.48
YGR109W-AYGR109W-A TFA2P36145 328 aa5.82□□□□□ -1.48
YGR109W-AYGR109W-A UFD2P54860 961 aa5.82□□□□□ -1.48
YGR109W-AYGR109W-A TAF7Q05021 590 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms