RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C ATG26Q06321 1198 aa5.49□□□□□ -1.53
SEC9YGR009C VIP1Q06685 1146 aaKnown RBP5.49□□□□□ -1.53
SEC9YGR009C TOM70P07213 617 aaKnown RBP5.48□□□□□ -1.53
SEC9YGR009C POL4P25615 582 aa5.48□□□□□ -1.53
SEC9YGR009C GLC3P32775 704 aa5.48□□□□□ -1.53
SEC9YGR009C COY1P34237 679 aa5.48□□□□□ -1.53
SEC9YGR009C RRN3P36070 627 aa5.48□□□□□ -1.53
SEC9YGR009C VPS41P38959 992 aa5.48□□□□□ -1.53
SEC9YGR009C RAD26P40352 1085 aa5.48□□□□□ -1.53
SEC9YGR009C UTP18P40362 594 aaPredicted RBP5.48□□□□□ -1.53
SEC9YGR009C YIL055CP40523 627 aaKnown RBP5.48□□□□□ -1.53
SEC9YGR009C DSN1P40568 576 aa5.48□□□□□ -1.53
SEC9YGR009C HOP2P53187 214 aa5.48□□□□□ -1.53
SEC9YGR009C PNG1Q02890 363 aa5.48□□□□□ -1.53
SEC9YGR009C KAR5Q04746 504 aa5.48□□□□□ -1.53
SEC9YGR009C SPP382Q06411 708 aaPredicted RBP5.48□□□□□ -1.53
SEC9YGR009C TUF1P02992 437 aaKnown RBP5.47□□□□□ -1.53
SEC9YGR009C PHO84P25297 587 aaKnown RBP5.47□□□□□ -1.53
SEC9YGR009C TTI1P36097 1038 aa5.47□□□□□ -1.53
SEC9YGR009C VID27P40157 782 aa5.47□□□□□ -1.53
SEC9YGR009C VPS70P47161 811 aa5.47□□□□□ -1.53
SEC9YGR009C SNZ1Q03148 297 aa5.47□□□□□ -1.53
SEC9YGR009C YML119WQ03208 357 aa5.47□□□□□ -1.53
SEC9YGR009C HEH2Q03281 663 aa5.47□□□□□ -1.53
SEC9YGR009C TFB3Q03290 321 aa5.47□□□□□ -1.53
SEC9YGR009C MAG2Q06436 670 aaKnown RBP5.47□□□□□ -1.53
SEC9YGR009C TFB4Q12004 338 aa5.47□□□□□ -1.53
SEC9YGR009C DPH6Q12429 685 aa5.47□□□□□ -1.53
SEC9YGR009C LSO1Q3E827 93 aa5.47□□□□□ -1.53
SEC9YGR009C MPH2P0CD99 609 aa5.47□□□□□ -1.53
SEC9YGR009C KEX2P13134 814 aa5.47□□□□□ -1.53
SEC9YGR009C PSO2P30620 661 aa5.47□□□□□ -1.53
SEC9YGR009C SRP40P32583 406 aaPredicted RBP5.47□□□□□ -1.53
SEC9YGR009C RRF1P38771 230 aa5.47□□□□□ -1.53
SEC9YGR009C IPL1P38991 367 aa5.47□□□□□ -1.53
SEC9YGR009C BEM4P39011 633 aa5.47□□□□□ -1.53
SEC9YGR009C SDS3P40505 327 aa5.47□□□□□ -1.53
SEC9YGR009C GCD10P41814 478 aa5.47□□□□□ -1.53
SEC9YGR009C YNL050CP53952 270 aa5.47□□□□□ -1.53
SEC9YGR009C CWC21Q03375 135 aaKnown RBP5.47□□□□□ -1.53
SEC9YGR009C RPN4Q03465 531 aa5.47□□□□□ -1.53
SEC9YGR009C ATG16Q03818 150 aa5.47□□□□□ -1.53
SEC9YGR009C RAD33Q04231 177 aa5.47□□□□□ -1.53
SEC9YGR009C YLR352WQ06479 807 aa5.47□□□□□ -1.53
SEC9YGR009C RED1P14291 827 aa5.46□□□□□ -1.54
SEC9YGR009C SRP54P20424 541 aaKnown RBP5.46□□□□□ -1.54
SEC9YGR009C YDJ1P25491 409 aaKnown RBP5.46□□□□□ -1.54
SEC9YGR009C VPH1P32563 840 aaKnown RBP5.46□□□□□ -1.54
SEC9YGR009C DLD1P32891 587 aa5.46□□□□□ -1.54
SEC9YGR009C JNM1P36224 373 aa5.46□□□□□ -1.54
SEC9YGR009C YLF2P38746 405 aa5.46□□□□□ -1.54
SEC9YGR009C RIC1P40395 1056 aa5.46□□□□□ -1.54
SEC9YGR009C IOC3P43596 787 aa5.46□□□□□ -1.54
SEC9YGR009C ATG1P53104 897 aa5.46□□□□□ -1.54
SEC9YGR009C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
SEC9YGR009C CSR1Q06705 408 aaKnown RBP5.46□□□□□ -1.54
SEC9YGR009C HAT1Q12341 374 aa5.46□□□□□ -1.54
SEC9YGR009C RRP36Q12481 300 aaPredicted RBP5.46□□□□□ -1.54
SEC9YGR009C URA1P28272 314 aaPredicted RBP5.46□□□□□ -1.54
SEC9YGR009C YAP1801P38856 637 aa5.46□□□□□ -1.54
SEC9YGR009C EPS1P40557 701 aa5.46□□□□□ -1.54
SEC9YGR009C ATG38Q05789 226 aaKnown RBP5.46□□□□□ -1.54
SEC9YGR009C ESF1Q06344 628 aaKnown RBP5.46□□□□□ -1.54
SEC9YGR009C YAH1Q12184 172 aaKnown RBP5.46□□□□□ -1.54
SEC9YGR009C YIL002W-AQ3E7Z5 69 aa5.46□□□□□ -1.54
SEC9YGR009C PUF4P25339 888 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SEC9YGR009C UBP9P39967 754 aa5.45□□□□□ -1.54
SEC9YGR009C SRB7P47822 140 aa5.45□□□□□ -1.54
SEC9YGR009C SHE10P53075 577 aa5.45□□□□□ -1.54
SEC9YGR009C MSH6Q03834 1242 aa5.45□□□□□ -1.54
SEC9YGR009C AOS1Q06624 347 aa5.45□□□□□ -1.54
SEC9YGR009C MDM38Q08179 573 aa5.45□□□□□ -1.54
SEC9YGR009C YOR378WQ08902 515 aa5.45□□□□□ -1.54
SEC9YGR009C YRM1Q12340 786 aa5.45□□□□□ -1.54
SEC9YGR009C YGR161W-CQ3E744 92 aa5.45□□□□□ -1.54
SEC9YGR009C INH1P01097 85 aa5.44□□□□□ -1.54
SEC9YGR009C FAR1P21268 830 aa5.44□□□□□ -1.54
SEC9YGR009C HIR2P32480 875 aa5.44□□□□□ -1.54
SEC9YGR009C ECM32P32644 1121 aaKnown RBP5.44□□□□□ -1.54
SEC9YGR009C YKL100CP34248 587 aa5.44□□□□□ -1.54
SEC9YGR009C UBP14P38237 781 aaKnown RBP5.44□□□□□ -1.54
SEC9YGR009C EXO84P38261 753 aa5.44□□□□□ -1.54
SEC9YGR009C IES5P40060 125 aa5.44□□□□□ -1.54
SEC9YGR009C SET2P46995 733 aaKnown RBP5.44□□□□□ -1.54
SEC9YGR009C RSC1P53236 928 aa5.44□□□□□ -1.54
SEC9YGR009C ZDS2P54786 942 aa5.44□□□□□ -1.54
SEC9YGR009C YDR338CQ05497 695 aa5.44□□□□□ -1.54
SEC9YGR009C SWA2Q06677 668 aa5.44□□□□□ -1.54
SEC9YGR009C NOB1Q08444 459 aaKnown RBP5.44□□□□□ -1.54
SEC9YGR009C TPD3P31383 635 aa5.44□□□□□ -1.54
SEC9YGR009C GLN1P32288 370 aaKnown RBP5.44□□□□□ -1.54
SEC9YGR009C YKL091CP33324 310 aaKnown RBP5.44□□□□□ -1.54
SEC9YGR009C APL2P36000 726 aaPredicted RBP5.44□□□□□ -1.54
SEC9YGR009C PEX18P38855 283 aa5.44□□□□□ -1.54
SEC9YGR009C BUD6P41697 788 aa5.44□□□□□ -1.54
SEC9YGR009C LAM5P43560 674 aa5.44□□□□□ -1.54
SEC9YGR009C YJR142WP47173 342 aa5.44□□□□□ -1.54
SEC9YGR009C UTP13Q05946 817 aaKnown RBP5.44□□□□□ -1.54
SEC9YGR009C RPB2P08518 1224 aaKnown RBP5.43□□□□□ -1.54
SEC9YGR009C DAL80P26343 269 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms