RNA–Protein interactions for RNA: YGL085W

LCL3, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL3, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL3YGL085W YRB30P53107 440 aaPredicted RBP8.22□□□□□ -1.09
LCL3YGL085W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
LCL3YGL085W TOS4Q06266 489 aa8.22□□□□□ -1.09
LCL3YGL085W ADR1P07248 1323 aa8.22□□□□□ -1.09
LCL3YGL085W NUG1P40010 520 aaKnown RBP8.21□□□□□ -1.1
LCL3YGL085W YIL092WP40497 633 aa8.21□□□□□ -1.1
LCL3YGL085W ARG82P07250 355 aa8.2□□□□□ -1.1
LCL3YGL085W DUS1P53759 423 aaKnown RBP8.2□□□□□ -1.1
LCL3YGL085W SEN54Q02825 467 aaPredicted RBP8.2□□□□□ -1.1
LCL3YGL085W CWC15Q03772 175 aaKnown RBP8.2□□□□□ -1.1
LCL3YGL085W TYW1Q08960 810 aaKnown RBP8.2□□□□□ -1.1
LCL3YGL085W POM152P39685 1337 aa8.2□□□□□ -1.1
LCL3YGL085W DAL5P15365 543 aa8.19□□□□□ -1.1
LCL3YGL085W WRS1Q12109 432 aaKnown RBP8.19□□□□□ -1.1
LCL3YGL085W PSF3Q12146 194 aa8.19□□□□□ -1.1
LCL3YGL085W RPS7AP26786 190 aaKnown RBP8.18□□□□□ -1.1
LCL3YGL085W JJJ2P46997 583 aa8.18□□□□□ -1.1
LCL3YGL085W ACK1Q07622 623 aaPredicted RBP8.18□□□□□ -1.1
LCL3YGL085W GSC2P40989 1895 aa8.17□□□□□ -1.1
LCL3YGL085W CBP1P07252 654 aa8.17□□□□□ -1.1
LCL3YGL085W UTP7P40055 554 aaKnown RBP8.17□□□□□ -1.1
LCL3YGL085W RPL17AP05740 184 aaKnown RBP8.16□□□□□ -1.1
LCL3YGL085W RPL17BP46990 184 aaKnown RBP8.16□□□□□ -1.1
LCL3YGL085W MTC3P53077 123 aa8.16□□□□□ -1.1
LCL3YGL085W GYP5Q12344 894 aa8.16□□□□□ -1.1
LCL3YGL085W SEC18P18759 758 aaKnown RBP8.15□□□□□ -1.1
LCL3YGL085W SLA1P32790 1244 aa8.15□□□□□ -1.1
LCL3YGL085W SSF1P38789 453 aaPredicted RBP8.15□□□□□ -1.1
LCL3YGL085W YNG2P38806 282 aaKnown RBP8.15□□□□□ -1.1
LCL3YGL085W YJL171CP46992 396 aa8.15□□□□□ -1.1
LCL3YGL085W RAD2P07276 1031 aa8.14□□□□□ -1.11
LCL3YGL085W GCD7P32502 381 aaPredicted RBP8.14□□□□□ -1.11
LCL3YGL085W RPT3P33298 428 aaKnown RBP8.14□□□□□ -1.11
LCL3YGL085W GLO3P38682 493 aaKnown RBP8.14□□□□□ -1.11
LCL3YGL085W YFH7P43591 353 aa8.14□□□□□ -1.11
LCL3YGL085W HGH1P48362 394 aaKnown RBP8.14□□□□□ -1.11
LCL3YGL085W SPO1P53541 631 aa8.14□□□□□ -1.11
LCL3YGL085W HVG1P0CE11 249 aa8.13□□□□□ -1.11
LCL3YGL085W PRS1P32895 427 aaKnown RBP8.13□□□□□ -1.11
LCL3YGL085W BSD2P38356 321 aa8.13□□□□□ -1.11
LCL3YGL085W RRT6P53117 311 aaPredicted RBP8.13□□□□□ -1.11
LCL3YGL085W CSR2Q12734 1121 aa8.13□□□□□ -1.11
LCL3YGL085W AI2P03876 854 aa8.12□□□□□ -1.11
LCL3YGL085W PNT1P38969 423 aa8.12□□□□□ -1.11
LCL3YGL085W ILV3P39522 585 aaKnown RBP8.12□□□□□ -1.11
LCL3YGL085W TIF6Q12522 245 aaKnown RBP8.12□□□□□ -1.11
LCL3YGL085W PCS60P38137 543 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11 RIP-Chip
LCL3YGL085W HAL5P38970 855 aaKnown RBP8.11□□□□□ -1.11
LCL3YGL085W NIT1P40447 199 aa8.11□□□□□ -1.11
LCL3YGL085W YIR042CP40586 236 aa8.11□□□□□ -1.11
LCL3YGL085W PUS6P53294 404 aa8.11□□□□□ -1.11
LCL3YGL085W YNL193WP53870 558 aa8.11□□□□□ -1.11
LCL3YGL085W RRI2Q12348 645 aa8.11□□□□□ -1.11
LCL3YGL085W FLO1P32768 1537 aa8.1□□□□□ -1.11
LCL3YGL085W PIF1P07271 859 aa8.1□□□□□ -1.11
LCL3YGL085W SNF3P10870 884 aa8.1□□□□□ -1.11
LCL3YGL085W PTK1P36002 662 aaPredicted RBP8.1□□□□□ -1.11
LCL3YGL085W APL6P46682 809 aa8.1□□□□□ -1.11
LCL3YGL085W INM2Q05533 292 aa8.1□□□□□ -1.11
LCL3YGL085W RPN7Q06103 429 aaKnown RBP8.1□□□□□ -1.11
LCL3YGL085W SRF1Q12516 437 aa8.1□□□□□ -1.11
LCL3YGL085W GAL2P13181 574 aa8.09□□□□□ -1.11
LCL3YGL085W CST9Q06032 482 aa8.09□□□□□ -1.11
LCL3YGL085W NCB2Q92317 146 aa8.08□□□□□ -1.12
LCL3YGL085W MDL2P33311 773 aa8.07□□□□□ -1.12
LCL3YGL085W PUF6Q04373 656 aaKnown RBP8.07□□□□□ -1.12
LCL3YGL085W MOT2P34909 587 aaKnown RBP8.06□□□□□ -1.12
LCL3YGL085W TFA1P36100 482 aa8.06□□□□□ -1.12
LCL3YGL085W KEL1P38853 1164 aaKnown RBP8.06□□□□□ -1.12
LCL3YGL085W POL32P47110 350 aa8.06□□□□□ -1.12
LCL3YGL085W CYB2P00175 591 aa8.05□□□□□ -1.12
LCL3YGL085W RAD53P22216 821 aa8.05□□□□□ -1.12
LCL3YGL085W APE3P37302 537 aaKnown RBP8.05□□□□□ -1.12
LCL3YGL085W KTR3P38130 404 aaPredicted RBP8.05□□□□□ -1.12
LCL3YGL085W RSC30P38781 883 aa8.05□□□□□ -1.12
LCL3YGL085W FUN12P39730 1002 aaKnown RBP8.05□□□□□ -1.12
LCL3YGL085W YGL242CP53066 181 aa8.05□□□□□ -1.12
LCL3YGL085W NSG2P53898 299 aa8.05□□□□□ -1.12
LCL3YGL085W RBA50Q04418 439 aa8.05□□□□□ -1.12
LCL3YGL085W PFK2P16862 959 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
LCL3YGL085W BOI1P38041 980 aaKnown RBP8.04□□□□□ -1.12
LCL3YGL085W TPS3P38426 1054 aaKnown RBP8.04□□□□□ -1.12
LCL3YGL085W GIN4Q12263 1142 aa8.04□□□□□ -1.12
LCL3YGL085W PMA1P05030 918 aaKnown RBP8.03□□□□□ -1.12
LCL3YGL085W ADP1P25371 1049 aa8.03□□□□□ -1.12
LCL3YGL085W NMD2P38798 1089 aaKnown RBP8.03□□□□□ -1.12
LCL3YGL085W NCS6P53088 359 aa8.03□□□□□ -1.12
LCL3YGL085W PPM2Q08282 695 aa8.03□□□□□ -1.12
LCL3YGL085W NOT3P06102 836 aaKnown RBP8.02□□□□□ -1.13
LCL3YGL085W GRX7P38068 203 aa8.02□□□□□ -1.13
LCL3YGL085W NOP2P40991 618 aaKnown RBP8.02□□□□□ -1.13
LCL3YGL085W PIP2P52960 996 aa8.02□□□□□ -1.13
LCL3YGL085W MLC1P53141 149 aa8.02□□□□□ -1.13
LCL3YGL085W PCL8Q08966 492 aa8.02□□□□□ -1.13
LCL3YGL085W GEF1P37020 779 aa8.01□□□□□ -1.13
LCL3YGL085W MSH4P40965 878 aaPredicted RBP8.01□□□□□ -1.13
LCL3YGL085W BDP1P46678 594 aa8.01□□□□□ -1.13
LCL3YGL085W ALO1P54783 526 aaKnown RBP8.01□□□□□ -1.13
LCL3YGL085W PEX29Q03370 554 aa8.01□□□□□ -1.13
LCL3YGL085W PDR18P53756 1333 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms