RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W DDP1Q99321 188 aaKnown RBP7.75□□□□□ -1.17
RGD2YFL047W COBP00163 385 aa7.75□□□□□ -1.17
RGD2YFL047W ATE1P16639 503 aa7.75□□□□□ -1.17
RGD2YFL047W APP1P53933 587 aa7.75□□□□□ -1.17
RGD2YFL047W ECM23Q02710 187 aa7.75□□□□□ -1.17
RGD2YFL047W PSK2Q08217 1101 aa7.75□□□□□ -1.17
RGD2YFL047W TAF13P11747 167 aa7.73□□□□□ -1.17
RGD2YFL047W CYC8P14922 966 aa7.73□□□□□ -1.17
RGD2YFL047W TPM1P17536 199 aaKnown RBP7.73□□□□□ -1.17
RGD2YFL047W LEO1P38439 464 aa7.73□□□□□ -1.17
RGD2YFL047W YGL082WP53155 381 aa7.73□□□□□ -1.17
RGD2YFL047W TIM50Q02776 476 aa7.73□□□□□ -1.17
RGD2YFL047W SUP35P05453 685 aaKnown RBP7.73□□□□□ -1.17
RGD2YFL047W MATALPHA2P0CY08 210 aa7.73□□□□□ -1.17
RGD2YFL047W HMLALPHA2P0CY09 210 aa7.73□□□□□ -1.17
RGD2YFL047W OPI1P21957 404 aa7.73□□□□□ -1.17
RGD2YFL047W GRX1P25373 110 aaKnown RBP7.73□□□□□ -1.17
RGD2YFL047W FBP26P32604 452 aa7.73□□□□□ -1.17
RGD2YFL047W YHL017WP38745 532 aa7.73□□□□□ -1.17
RGD2YFL047W PKH3Q03306 898 aaPredicted RBP7.73□□□□□ -1.17
RGD2YFL047W ETT1Q08421 412 aaKnown RBP7.73□□□□□ -1.17
RGD2YFL047W SNU66Q12420 587 aaPredicted RBP7.73□□□□□ -1.17
RGD2YFL047W LAM4P38800 1345 aa7.73□□□□□ -1.17
RGD2YFL047W GPA1P08539 472 aa7.72□□□□□ -1.17
RGD2YFL047W OSH3P38713 996 aaKnown RBP7.72□□□□□ -1.17
RGD2YFL047W DOT5P40553 215 aa7.72□□□□□ -1.17
RGD2YFL047W YLR407WQ06070 228 aa7.72□□□□□ -1.17
RGD2YFL047W SGD1Q06132 899 aa7.72□□□□□ -1.17
RGD2YFL047W YKR075CP36155 307 aa7.72□□□□□ -1.17
RGD2YFL047W BBC1P47068 1157 aa7.72□□□□□ -1.17
RGD2YFL047W FOX2Q02207 900 aaKnown RBP7.72□□□□□ -1.17
RGD2YFL047W ESC2Q06340 456 aa7.72□□□□□ -1.17
RGD2YFL047W SES1P07284 462 aaKnown RBP7.71□□□□□ -1.18
RGD2YFL047W RFC5P38251 354 aa7.71□□□□□ -1.18
RGD2YFL047W YMR147WP40218 223 aaKnown RBP7.71□□□□□ -1.18
RGD2YFL047W YKE2P52553 114 aa7.71□□□□□ -1.18
RGD2YFL047W PEP3P27801 918 aa7.7□□□□□ -1.18
RGD2YFL047W STU2P46675 888 aa7.7□□□□□ -1.18
RGD2YFL047W IMP2'P32351 346 aa7.7□□□□□ -1.18
RGD2YFL047W SER1P33330 395 aaKnown RBP7.7□□□□□ -1.18
RGD2YFL047W YER130CP39959 443 aa7.7□□□□□ -1.18
RGD2YFL047W FYV10P40492 516 aa7.7□□□□□ -1.18
RGD2YFL047W SAC3P46674 1301 aa7.7□□□□□ -1.18
RGD2YFL047W MNR2P35724 969 aa7.69□□□□□ -1.18
RGD2YFL047W TPM2P40414 161 aa7.69□□□□□ -1.18
RGD2YFL047W YPT11P48559 417 aa7.69□□□□□ -1.18
RGD2YFL047W IMH1Q06704 911 aaKnown RBP7.69□□□□□ -1.18
RGD2YFL047W TFC8Q12308 588 aa7.69□□□□□ -1.18
RGD2YFL047W ADR1P07248 1323 aa7.69□□□□□ -1.18
RGD2YFL047W SRP40P32583 406 aaPredicted RBP7.69□□□□□ -1.18
RGD2YFL047W HAL5P38970 855 aaKnown RBP7.69□□□□□ -1.18
RGD2YFL047W VMS1Q04311 632 aaKnown RBP7.69□□□□□ -1.18
RGD2YFL047W BUD6P41697 788 aa7.68□□□□□ -1.18
RGD2YFL047W EPL1P43572 832 aa7.68□□□□□ -1.18
RGD2YFL047W HOS3Q02959 697 aaKnown RBP7.68□□□□□ -1.18
RGD2YFL047W ESF1Q06344 628 aaKnown RBP7.68□□□□□ -1.18
RGD2YFL047W MFT1P33441 392 aaKnown RBP7.67□□□□□ -1.18
RGD2YFL047W YAH1Q12184 172 aaKnown RBP7.67□□□□□ -1.18
RGD2YFL047W NYV1Q12255 253 aa7.67□□□□□ -1.18
RGD2YFL047W RFT1P38206 574 aaPredicted RBP7.67□□□□□ -1.18
RGD2YFL047W RPN1P38764 993 aaKnown RBP7.67□□□□□ -1.18
RGD2YFL047W KAR5Q04746 504 aa7.67□□□□□ -1.18
RGD2YFL047W CTI6Q08923 506 aa7.67□□□□□ -1.18
RGD2YFL047W TAH18Q12181 623 aa7.67□□□□□ -1.18
RGD2YFL047W GSY2P27472 705 aa7.66□□□□□ -1.18
RGD2YFL047W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
RGD2YFL047W RRM3P38766 723 aa7.66□□□□□ -1.18
RGD2YFL047W RRI2Q12348 645 aa7.66□□□□□ -1.18
RGD2YFL047W MCM4P30665 933 aaKnown RBP7.66□□□□□ -1.18
RGD2YFL047W MET1P36150 593 aa7.66□□□□□ -1.18
RGD2YFL047W GLO3P38682 493 aaKnown RBP7.66□□□□□ -1.18
RGD2YFL047W ALD3P54114 506 aa7.66□□□□□ -1.18
RGD2YFL047W POM152P39685 1337 aa7.65□□□□□ -1.18
RGD2YFL047W WAR1Q03631 944 aa7.65□□□□□ -1.18
RGD2YFL047W PGI1P12709 554 aaKnown RBP7.64□□□□□ -1.19
RGD2YFL047W PPM2Q08282 695 aa7.64□□□□□ -1.19
RGD2YFL047W SSF2Q12153 453 aaPredicted RBP7.64□□□□□ -1.19
RGD2YFL047W CRG1P38892 291 aaRIP-Chip data7.64□□□□□ -1.19not detected
RGD2YFL047W UBP10P53874 792 aaPredicted RBP7.64□□□□□ -1.19
RGD2YFL047W GRE2Q12068 342 aaKnown RBP7.64□□□□□ -1.19
RGD2YFL047W HAT1Q12341 374 aa7.64□□□□□ -1.19
RGD2YFL047W HSP82P02829 709 aaKnown RBP7.63□□□□□ -1.19
RGD2YFL047W RER2P35196 286 aa7.63□□□□□ -1.19
RGD2YFL047W PSY4P38193 441 aa7.63□□□□□ -1.19
RGD2YFL047W CEP3P40969 608 aa7.63□□□□□ -1.19
RGD2YFL047W SPN1Q06505 410 aaPredicted RBP7.63□□□□□ -1.19
RGD2YFL047W ISW2Q08773 1120 aa7.63□□□□□ -1.19
RGD2YFL047W COQ1P18900 473 aa7.63□□□□□ -1.19
RGD2YFL047W DIT2P21595 489 aa7.63□□□□□ -1.19
RGD2YFL047W YKT6P36015 200 aaKnown RBP7.63□□□□□ -1.19
RGD2YFL047W NOC2P39744 710 aaKnown RBP7.63□□□□□ -1.19
RGD2YFL047W CTH1P47976 325 aa7.63□□□□□ -1.19
RGD2YFL047W EST2Q06163 884 aa7.63□□□□□ -1.19
RGD2YFL047W PIF1P07271 859 aa7.62□□□□□ -1.19
RGD2YFL047W PFK2P16862 959 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
RGD2YFL047W NGR1P32831 672 aaKnown RBP7.62□□□□□ -1.19
RGD2YFL047W AKR1P39010 764 aa7.62□□□□□ -1.19
RGD2YFL047W DCS2Q12123 353 aa7.62□□□□□ -1.19
RGD2YFL047W UTP10P42945 1769 aaKnown RBP7.62□□□□□ -1.19
RGD2YFL047W CHO2P05374 869 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms