RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C PGA3Q12746 312 aaKnown RBP13.86□□□□□ -0.19
SCC4YER147C MRPL10P36520 322 aa13.85□□□□□ -0.19
SCC4YER147C ENT3P47160 408 aa13.85□□□□□ -0.19
SCC4YER147C YAH1Q12184 172 aaKnown RBP13.85□□□□□ -0.19
SCC4YER147C SAC3P46674 1301 aa13.85□□□□□ -0.19
SCC4YER147C OPI1P21957 404 aa13.84□□□□□ -0.19
SCC4YER147C DOT5P40553 215 aa13.84□□□□□ -0.19
SCC4YER147C YNL193WP53870 558 aa13.84□□□□□ -0.19
SCC4YER147C FOX2Q02207 900 aaKnown RBP13.84□□□□□ -0.19
SCC4YER147C YHL017WP38745 532 aa13.84□□□□□ -0.19
SCC4YER147C SER1P33330 395 aaKnown RBP13.83□□□□□ -0.2
SCC4YER147C NPR3P38742 1146 aa13.83□□□□□ -0.2
SCC4YER147C UTP10P42945 1769 aaKnown RBP13.83□□□□□ -0.2
SCC4YER147C RDS1P25611 832 aa13.82□□□□□ -0.2
SCC4YER147C YKR075CP36155 307 aa13.82□□□□□ -0.2
SCC4YER147C MPE1P35728 441 aaKnown RBP13.82□□□□□ -0.2
SCC4YER147C ESC2Q06340 456 aa13.82□□□□□ -0.2
SCC4YER147C YKE2P52553 114 aa13.81□□□□□ -0.2
SCC4YER147C DDP1Q99321 188 aaKnown RBP13.81□□□□□ -0.2
SCC4YER147C TRS33Q99394 268 aa13.81□□□□□ -0.2
SCC4YER147C MATALPHA2P0CY08 210 aa13.8□□□□□ -0.2
SCC4YER147C HMLALPHA2P0CY09 210 aa13.8□□□□□ -0.2
SCC4YER147C PEP3P27801 918 aa13.8□□□□□ -0.2
SCC4YER147C MAL33P38157 468 aa13.8□□□□□ -0.2
SCC4YER147C NOP58Q12499 511 aaKnown RBP13.8□□□□□ -0.2
SCC4YER147C FBP26P32604 452 aa13.79□□□□□ -0.2
SCC4YER147C SSL2Q00578 843 aa13.79□□□□□ -0.2
SCC4YER147C ADR1P07248 1323 aa13.79□□□□□ -0.2
SCC4YER147C BBC1P47068 1157 aa13.78□□□□□ -0.2
SCC4YER147C ESF1Q06344 628 aaKnown RBP13.78□□□□□ -0.2
SCC4YER147C CYC8P14922 966 aa13.77□□□□□ -0.21
SCC4YER147C ATE1P16639 503 aa13.77□□□□□ -0.21
SCC4YER147C IMP2'P32351 346 aa13.77□□□□□ -0.21
SCC4YER147C YMR147WP40218 223 aaKnown RBP13.77□□□□□ -0.21
SCC4YER147C SGD1Q06132 899 aa13.77□□□□□ -0.21
SCC4YER147C LAM4P38800 1345 aa13.77□□□□□ -0.21
SCC4YER147C RFC5P38251 354 aa13.76□□□□□ -0.21
SCC4YER147C PKH3Q03306 898 aaPredicted RBP13.76□□□□□ -0.21
SCC4YER147C RRI2Q12348 645 aa13.76□□□□□ -0.21
SCC4YER147C BUD6P41697 788 aa13.76□□□□□ -0.21
SCC4YER147C ECM23Q02710 187 aa13.76□□□□□ -0.21
SCC4YER147C YLR407WQ06070 228 aa13.76□□□□□ -0.21
SCC4YER147C NYV1Q12255 253 aa13.75□□□□□ -0.21
SCC4YER147C LAM6Q08001 693 aa13.74□□□□□ -0.21
SCC4YER147C HAT1Q12341 374 aa13.74□□□□□ -0.21
SCC4YER147C SES1P07284 462 aaKnown RBP13.74□□□□□ -0.21
SCC4YER147C SKI2P35207 1287 aaKnown RBP RIP-Chip data13.74□□□□□ -0.21not detected
SCC4YER147C SIS2P36024 562 aa13.74□□□□□ -0.21
SCC4YER147C TIM50Q02776 476 aa13.74□□□□□ -0.21
SCC4YER147C SSF2Q12153 453 aaPredicted RBP13.74□□□□□ -0.21
SCC4YER147C PIF1P07271 859 aa13.73□□□□□ -0.21
SCC4YER147C GPA1P08539 472 aa13.73□□□□□ -0.21
SCC4YER147C STU2P46675 888 aa13.73□□□□□ -0.21
SCC4YER147C MET1P36150 593 aa13.72□□□□□ -0.21
SCC4YER147C LEO1P38439 464 aa13.72□□□□□ -0.21
SCC4YER147C HAL5P38970 855 aaKnown RBP13.72□□□□□ -0.21
SCC4YER147C YER130CP39959 443 aa13.72□□□□□ -0.21
SCC4YER147C TAH18Q12181 623 aa13.72□□□□□ -0.21
SCC4YER147C MSB4Q12317 492 aa13.72□□□□□ -0.21
SCC4YER147C POM152P39685 1337 aa13.72□□□□□ -0.21
SCC4YER147C TPM2P40414 161 aa13.72□□□□□ -0.21
SCC4YER147C ENP2P48234 707 aaKnown RBP13.71□□□□□ -0.21
SCC4YER147C YPT11P48559 417 aa13.71□□□□□ -0.21
SCC4YER147C UBP10P53874 792 aaPredicted RBP13.71□□□□□ -0.21
SCC4YER147C GRE2Q12068 342 aaKnown RBP13.71□□□□□ -0.21
SCC4YER147C RRM3P38766 723 aa13.7□□□□□ -0.22
SCC4YER147C PGI1P12709 554 aaKnown RBP13.69□□□□□ -0.22
SCC4YER147C KAR5Q04746 504 aa13.69□□□□□ -0.22
SCC4YER147C RFT1P38206 574 aaPredicted RBP13.68□□□□□ -0.22
SCC4YER147C CRG1P38892 291 aaRIP-Chip data13.68□□□□□ -0.22not detected
SCC4YER147C EPL1P43572 832 aa13.68□□□□□ -0.22
SCC4YER147C PRP40P33203 583 aaKnown RBP13.67□□□□□ -0.22
SCC4YER147C VMS1Q04311 632 aaKnown RBP13.67□□□□□ -0.22
SCC4YER147C SPN1Q06505 410 aaPredicted RBP13.67□□□□□ -0.22
SCC4YER147C GLO3P38682 493 aaKnown RBP13.67□□□□□ -0.22
SCC4YER147C ALD3P54114 506 aa13.67□□□□□ -0.22
SCC4YER147C HOS3Q02959 697 aaKnown RBP13.67□□□□□ -0.22
SCC4YER147C NGR1P32831 672 aaKnown RBP13.66□□□□□ -0.22
SCC4YER147C MFT1P33441 392 aaKnown RBP13.65□□□□□ -0.22
SCC4YER147C EST2Q06163 884 aa13.65□□□□□ -0.22
SCC4YER147C HSP82P02829 709 aaKnown RBP13.65□□□□□ -0.22
SCC4YER147C MPH3P0CE00 602 aa13.65□□□□□ -0.22
SCC4YER147C DIT2P21595 489 aa13.65□□□□□ -0.22
SCC4YER147C YKT6P36015 200 aaKnown RBP13.65□□□□□ -0.22
SCC4YER147C FYV10P40492 516 aa13.65□□□□□ -0.22
SCC4YER147C IRC8P47046 822 aa13.65□□□□□ -0.22
SCC4YER147C PFK2P16862 959 aaKnown RBP RIP-Chip data13.64□□□□□ -0.23not detected
SCC4YER147C RER2P35196 286 aa13.64□□□□□ -0.23
SCC4YER147C SRC1Q03707 834 aa13.64□□□□□ -0.23
SCC4YER147C PPM2Q08282 695 aa13.64□□□□□ -0.23
SCC4YER147C GSY2P27472 705 aa13.63□□□□□ -0.23
SCC4YER147C MNR2P35724 969 aa13.63□□□□□ -0.23
SCC4YER147C CBP3P21560 335 aa13.63□□□□□ -0.23
SCC4YER147C SRP40P32583 406 aaPredicted RBP13.63□□□□□ -0.23
SCC4YER147C THI3Q07471 609 aa13.63□□□□□ -0.23
SCC4YER147C RPN1P38764 993 aaKnown RBP13.62□□□□□ -0.23
SCC4YER147C TFG2P41896 400 aaPredicted RBP13.62□□□□□ -0.23
SCC4YER147C YJL181WP46987 611 aa13.62□□□□□ -0.23
SCC4YER147C ISW2Q08773 1120 aa13.62□□□□□ -0.23
SCC4YER147C RAT1Q02792 1006 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms